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The map label for this gene is sodA [H]

Identifier: 119871159

GI number: 119871159

Start: 5380428

End: 5381051

Strand: Direct

Name: sodA [H]

Synonym: Mkms_5132

Alternate gene names: 119871159

Gene position: 5380428-5381051 (Clockwise)

Preceding gene: 119871158

Following gene: 119871160

Centisome position: 93.78

GC content: 62.66

Gene sequence:

>624_bases
GTGGCTGAATACACCTTGCCCGATCTTGATTACGATTACGGCGCCCTCGAACCGCACATCTCGGGGCAGATCAACGAGCT
TCACCACAGCAAACACCACGCGACGTATGTGAAGGGCGCCAACGACGCGCTGTCCAAGCTGGCCGAGGCGCGGGAGTCCG
GAGACCACTCCGCGATCTTCCTCAACGAGAAGAACCTCGCCTTCCATTTGGGTGGACACGTCAACCACACGATCTGGTGG
AAGAACCTCTCTCCCAACGGTGGCGACAAGCCGACCGGTGAGCTGGCCGCCGCGCTCGACGACGCATTCGGCTCGTTCGA
CAACTTCCGCGCCCAGTTCACCGCCGCGGCCAACGGGCTGCAGGGCTCCGGGTGGGCGGTTCTCGGATACGACACGCTGG
GCCAGCGGCTGCTGACCTTCCAGCTGTTCGACCAGCAGGCAAACGTGCCGCTGGGCATCATCCCGCTGCTGCAGGTCGAC
ATGTGGGAGCACGCCTACTACCTGCAGTACAAGAACGTGAAGGCCGACTACGTGAAGGCGTTCTGGAACGTCGTCAACTG
GGAGGACGTGCAGAACCGGTTCGCCAAGGCAACGAGTTCGGCCAGCGGCATCATCGTCGGCTGA

Upstream 100 bases:

>100_bases
CGTGGACGTGCATCCTTGCGGTGCGCGCTGCTATGGAGCAAGGTTGACATCGATGTCGAGGATGTCGAGCTCCATCAATC
ACTGCTGAGGAAGGAACCTT

Downstream 100 bases:

>100_bases
CACCGGTCTTTCGCCATACTCGAATGAGGGGCGCCGCGCGATTTCGCGCGGCGCCCCGCTTTCGTCCCCGGGGGTTCACC
ACCCGTTAGCACTCGTGTCG

Product: superoxide dismutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MAEYTLPDLDYDYGALEPHISGQINELHHSKHHATYVKGANDALSKLAEARESGDHSAIFLNEKNLAFHLGGHVNHTIWW
KNLSPNGGDKPTGELAAALDDAFGSFDNFRAQFTAAANGLQGSGWAVLGYDTLGQRLLTFQLFDQQANVPLGIIPLLQVD
MWEHAYYLQYKNVKADYVKAFWNVVNWEDVQNRFAKATSSASGIIVG

Sequences:

>Translated_207_residues
MAEYTLPDLDYDYGALEPHISGQINELHHSKHHATYVKGANDALSKLAEARESGDHSAIFLNEKNLAFHLGGHVNHTIWW
KNLSPNGGDKPTGELAAALDDAFGSFDNFRAQFTAAANGLQGSGWAVLGYDTLGQRLLTFQLFDQQANVPLGIIPLLQVD
MWEHAYYLQYKNVKADYVKAFWNVVNWEDVQNRFAKATSSASGIIVG
>Mature_206_residues
AEYTLPDLDYDYGALEPHISGQINELHHSKHHATYVKGANDALSKLAEARESGDHSAIFLNEKNLAFHLGGHVNHTIWWK
NLSPNGGDKPTGELAAALDDAFGSFDNFRAQFTAAANGLQGSGWAVLGYDTLGQRLLTFQLFDQQANVPLGIIPLLQVDM
WEHAYYLQYKNVKADYVKAFWNVVNWEDVQNRFAKATSSASGIIVG

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG0605

COG function: function code P; Superoxide dismutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron/manganese superoxide dismutase family [H]

Homologues:

Organism=Homo sapiens, GI67782307, Length=196, Percent_Identity=53.5714285714286, Blast_Score=211, Evalue=3e-55,
Organism=Homo sapiens, GI67782305, Length=196, Percent_Identity=53.5714285714286, Blast_Score=211, Evalue=3e-55,
Organism=Homo sapiens, GI67782309, Length=196, Percent_Identity=44.3877551020408, Blast_Score=151, Evalue=4e-37,
Organism=Escherichia coli, GI1790342, Length=211, Percent_Identity=40.7582938388626, Blast_Score=148, Evalue=3e-37,
Organism=Escherichia coli, GI1787946, Length=195, Percent_Identity=40.5128205128205, Blast_Score=136, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI17506561, Length=197, Percent_Identity=47.2081218274112, Blast_Score=189, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17569479, Length=197, Percent_Identity=45.1776649746193, Blast_Score=176, Evalue=9e-45,
Organism=Saccharomyces cerevisiae, GI6321796, Length=204, Percent_Identity=47.0588235294118, Blast_Score=184, Evalue=8e-48,
Organism=Drosophila melanogaster, GI17136812, Length=196, Percent_Identity=44.3877551020408, Blast_Score=181, Evalue=4e-46,

Paralogues:

None

Copy number: 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001189
- InterPro:   IPR019833
- InterPro:   IPR019832
- InterPro:   IPR019831 [H]

Pfam domain/function: PF02777 Sod_Fe_C; PF00081 Sod_Fe_N [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 22907; Mature: 22775

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: PS00088 SOD_MN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEYTLPDLDYDYGALEPHISGQINELHHSKHHATYVKGANDALSKLAEARESGDHSAIF
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCEEE
LNEKNLAFHLGGHVNHTIWWKNLSPNGGDKPTGELAAALDDAFGSFDNFRAQFTAAANGL
EECCCEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHEEEEHHCCCC
QGSGWAVLGYDTLGQRLLTFQLFDQQANVPLGIIPLLQVDMWEHAYYLQYKNVKADYVKA
CCCCEEEEEHHHHHHHHHHHEEECCCCCCCEEEHHHEEHHHHCCEEEEEECCCCHHHHHH
FWNVVNWEDVQNRFAKATSSASGIIVG
HHHCCCHHHHHHHHHHHCCCCCCEEEC
>Mature Secondary Structure 
AEYTLPDLDYDYGALEPHISGQINELHHSKHHATYVKGANDALSKLAEARESGDHSAIF
CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCEEE
LNEKNLAFHLGGHVNHTIWWKNLSPNGGDKPTGELAAALDDAFGSFDNFRAQFTAAANGL
EECCCEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHEEEEHHCCCC
QGSGWAVLGYDTLGQRLLTFQLFDQQANVPLGIIPLLQVDMWEHAYYLQYKNVKADYVKA
CCCCEEEEEHHHHHHHHHHHEEECCCCCCCEEEHHHEEHHHHCCEEEEEECCCCHHHHHH
FWNVVNWEDVQNRFAKATSSASGIIVG
HHHCCCHHHHHHHHHHHCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8692009 [H]