| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is bfrB [H]
Identifier: 119871154
GI number: 119871154
Start: 5376805
End: 5377350
Strand: Direct
Name: bfrB [H]
Synonym: Mkms_5127
Alternate gene names: 119871154
Gene position: 5376805-5377350 (Clockwise)
Preceding gene: 119871153
Following gene: 119871158
Centisome position: 93.72
GC content: 67.22
Gene sequence:
>546_bases ATGACGACATTCGGCGCACTCGACACCAAGTTCCACGGACTCCTCCAGGAGCAGATCCGCAGCGAGTTCACCGCCGCTCA GCAATACATCGCGATCGCGGTGTACTTCGACGGCGCCGATCTGCCGCAGCTCGCCAAGCACTTCTACGGTCAGTCCGTCG AAGAGCGCAACCACGCGATGATGCTCGTGCAGTACCTCATCGACCGCGACGTCGAGATCGAGATCCCCGGCGTCGACGAG GTGTGCAACCGCTTCGACTCCCCGCGCGACGCGCTCGCCCTGGCGCTGGATCTGGAGCGCACCGTCACCGAACAGATCAC CCGGCTGGCCAGCGTGTCCCGCGAGGAGGGCGACTACCTCGGCGAGCAGTTCATGCAGTGGTTCCTCAAGGAGCAGGTCG AGGAGGTCGCGCAGATGACGACGCTGGTCCGTATCGCCGAGCGGGCGGGCGCCAACCTCTTCCACCTCGAGGATTTCGTC GCCCGCGACCTGTCGGGCGCGGGCGCCGATGCGGCGGCCCCGCGGGCGGCGGGCGGCGCTCTCTAA
Upstream 100 bases:
>100_bases GCCACCGTCACAAATCGACGGCTCCCCGTTAGGAAACCCTTCCCTCAGTAAGGTCCTCCTTCACTGACAATGCTCTCTGA CCTGCTATATCGTGGCGGCC
Downstream 100 bases:
>100_bases CGATCGGTGCCGGCCGCGCCGGTCAACCCGTTCTGCAGCCAGTCCTTGGTGCGGCGCGGGTGGTTCGTCGCCACCCACGC CACGCCGAGGTCGCGGCAGT
Product: Ferritin, Dps family protein
Products: NA
Alternate protein names: Non-heme ferritin Ftn [H]
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MTTFGALDTKFHGLLQEQIRSEFTAAQQYIAIAVYFDGADLPQLAKHFYGQSVEERNHAMMLVQYLIDRDVEIEIPGVDE VCNRFDSPRDALALALDLERTVTEQITRLASVSREEGDYLGEQFMQWFLKEQVEEVAQMTTLVRIAERAGANLFHLEDFV ARDLSGAGADAAAPRAAGGAL
Sequences:
>Translated_181_residues MTTFGALDTKFHGLLQEQIRSEFTAAQQYIAIAVYFDGADLPQLAKHFYGQSVEERNHAMMLVQYLIDRDVEIEIPGVDE VCNRFDSPRDALALALDLERTVTEQITRLASVSREEGDYLGEQFMQWFLKEQVEEVAQMTTLVRIAERAGANLFHLEDFV ARDLSGAGADAAAPRAAGGAL >Mature_180_residues TTFGALDTKFHGLLQEQIRSEFTAAQQYIAIAVYFDGADLPQLAKHFYGQSVEERNHAMMLVQYLIDRDVEIEIPGVDEV CNRFDSPRDALALALDLERTVTEQITRLASVSREEGDYLGEQFMQWFLKEQVEEVAQMTTLVRIAERAGANLFHLEDFVA RDLSGAGADAAAPRAAGGAL
Specific function: Iron-storage protein (Potential) [H]
COG id: COG1528
COG function: function code P; Ferritin-like protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 - InterPro: IPR001519 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 20157; Mature: 20026
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTFGALDTKFHGLLQEQIRSEFTAAQQYIAIAVYFDGADLPQLAKHFYGQSVEERNHAM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHCCCCHHHHHHHH MLVQYLIDRDVEIEIPGVDEVCNRFDSPRDALALALDLERTVTEQITRLASVSREEGDYL HHHHHHHCCCCEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEQFMQWFLKEQVEEVAQMTTLVRIAERAGANLFHLEDFVARDLSGAGADAAAPRAAGGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC L C >Mature Secondary Structure TTFGALDTKFHGLLQEQIRSEFTAAQQYIAIAVYFDGADLPQLAKHFYGQSVEERNHAM CCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHCCCCHHHHHHHH MLVQYLIDRDVEIEIPGVDEVCNRFDSPRDALALALDLERTVTEQITRLASVSREEGDYL HHHHHHHCCCCEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEQFMQWFLKEQVEEVAQMTTLVRIAERAGANLFHLEDFVARDLSGAGADAAAPRAAGGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC L C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA