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The map label for this gene is ydbC [H]

Identifier: 119870988

GI number: 119870988

Start: 5200140

End: 5201018

Strand: Direct

Name: ydbC [H]

Synonym: Mkms_4961

Alternate gene names: 119870988

Gene position: 5200140-5201018 (Clockwise)

Preceding gene: 119870987

Following gene: 119870990

Centisome position: 90.64

GC content: 68.03

Gene sequence:

>879_bases
ATGCAGACTTTCTCCCTCGGATCCCACTCGGTCGGCCGCGTCGGCTTCGGTGCGATGCAACTGCCCGGCCCGGGTGTCTT
CGGCCCGCCCCGCGACCACGACCAGTCGATCGCGGTCCTGCGGCGGGCCATCGACCTCGGGATCGACCACATCGACACCG
CGCAGATCTACGGGCCGAACGTCGCAAACGAACTGATCCGCGAGGCGCTGCATCCCTATCCGGCCGACCTCGCGCTGGTG
TCCAAGGTCGGCGGCACACGTGGCGACAACGGCGAATGGCTGCCCGCACAGGATCCCGACGACCTCAGGCGGCAGATCGA
GGAGAACCTCGTCACCCTCGGAACGGATCGGCTGGCCGCGGTCAACCTGCGCCTGTTCGCCCGCGACGGCGGCGACGTTC
CGGCCCGCATCGAGGACCGCGATCTGTTCGGCCGTCAGCTCGACGCGATGATCAAGGCCCGCGACGAGGGGCTCATCGAC
GGCATCGGACTGTCCCACGTCTCGGTCGAACATCTGCGGTATGCGTTGGAGCGCACCGAGATCGTCTGCGTGCAGAACGC
CTTCAACCTCGTCGACCGCAGCGCGCAACCCCTGCTCGATGCGAGCACCGAGCACGGCATCGCGTTCGTGCCGTTCTTCC
CCCTCGGCTCCGCGTTCACCGCCGACAACCCCATCCTGGGCAACCCCGTCATCACCAGGGCCGCAACGGAACTCGGGCAC
ACGCCCGCGCAGATCGCGCTGGCCTGGACGCTGACGGTGGCGCCGAATGTGCTGTTGATCCCGGGCACCTCGTCGGTGGC
TCACCTCGGGGAGAACACCGCCGTCCGTGACATCGAACTCCCCGCCGAGGTCGTCGAGCAGTTGAACGCCGTCGCTTAG

Upstream 100 bases:

>100_bases
CGGGAGATCTACGGCGTCCTCGGCGAGGAATAGCGGGGATTTGGGCGTGGTTGGTTGCGCTGAGCGCGACCCACCACGCC
GAAATCACGATAGGTAGGAC

Downstream 100 bases:

>100_bases
CCGCTCACTCGACGTCGACCCAGTCCAGGGTGCGCTGTACGGCCTTCTGCCAGCCGGCGTACCCCTCGGCGCGCTGATCG
TCGCTCCACTGCGGAGTCCA

Product: aldo/keto reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MQTFSLGSHSVGRVGFGAMQLPGPGVFGPPRDHDQSIAVLRRAIDLGIDHIDTAQIYGPNVANELIREALHPYPADLALV
SKVGGTRGDNGEWLPAQDPDDLRRQIEENLVTLGTDRLAAVNLRLFARDGGDVPARIEDRDLFGRQLDAMIKARDEGLID
GIGLSHVSVEHLRYALERTEIVCVQNAFNLVDRSAQPLLDASTEHGIAFVPFFPLGSAFTADNPILGNPVITRAATELGH
TPAQIALAWTLTVAPNVLLIPGTSSVAHLGENTAVRDIELPAEVVEQLNAVA

Sequences:

>Translated_292_residues
MQTFSLGSHSVGRVGFGAMQLPGPGVFGPPRDHDQSIAVLRRAIDLGIDHIDTAQIYGPNVANELIREALHPYPADLALV
SKVGGTRGDNGEWLPAQDPDDLRRQIEENLVTLGTDRLAAVNLRLFARDGGDVPARIEDRDLFGRQLDAMIKARDEGLID
GIGLSHVSVEHLRYALERTEIVCVQNAFNLVDRSAQPLLDASTEHGIAFVPFFPLGSAFTADNPILGNPVITRAATELGH
TPAQIALAWTLTVAPNVLLIPGTSSVAHLGENTAVRDIELPAEVVEQLNAVA
>Mature_292_residues
MQTFSLGSHSVGRVGFGAMQLPGPGVFGPPRDHDQSIAVLRRAIDLGIDHIDTAQIYGPNVANELIREALHPYPADLALV
SKVGGTRGDNGEWLPAQDPDDLRRQIEENLVTLGTDRLAAVNLRLFARDGGDVPARIEDRDLFGRQLDAMIKARDEGLID
GIGLSHVSVEHLRYALERTEIVCVQNAFNLVDRSAQPLLDASTEHGIAFVPFFPLGSAFTADNPILGNPVITRAATELGH
TPAQIALAWTLTVAPNVLLIPGTSSVAHLGENTAVRDIELPAEVVEQLNAVA

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787674, Length=292, Percent_Identity=47.6027397260274, Blast_Score=266, Evalue=2e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 31339; Mature: 31339

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTFSLGSHSVGRVGFGAMQLPGPGVFGPPRDHDQSIAVLRRAIDLGIDHIDTAQIYGPN
CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHCCCCH
VANELIREALHPYPADLALVSKVGGTRGDNGEWLPAQDPDDLRRQIEENLVTLGTDRLAA
HHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCEEE
VNLRLFARDGGDVPARIEDRDLFGRQLDAMIKARDEGLIDGIGLSHVSVEHLRYALERTE
EEEEEEEECCCCCCCEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
IVCVQNAFNLVDRSAQPLLDASTEHGIAFVPFFPLGSAFTADNPILGNPVITRAATELGH
EEEEHHHHHHHHCCCCCHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCC
TPAQIALAWTLTVAPNVLLIPGTSSVAHLGENTAVRDIELPAEVVEQLNAVA
CCHHEEEEEEEEECCCEEEECCCCHHHHCCCCCCEEEECCCHHHHHHHHCCC
>Mature Secondary Structure
MQTFSLGSHSVGRVGFGAMQLPGPGVFGPPRDHDQSIAVLRRAIDLGIDHIDTAQIYGPN
CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHCCCCH
VANELIREALHPYPADLALVSKVGGTRGDNGEWLPAQDPDDLRRQIEENLVTLGTDRLAA
HHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCEEE
VNLRLFARDGGDVPARIEDRDLFGRQLDAMIKARDEGLIDGIGLSHVSVEHLRYALERTE
EEEEEEEECCCCCCCEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
IVCVQNAFNLVDRSAQPLLDASTEHGIAFVPFFPLGSAFTADNPILGNPVITRAATELGH
EEEEHHHHHHHHCCCCCHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCC
TPAQIALAWTLTVAPNVLLIPGTSSVAHLGENTAVRDIELPAEVVEQLNAVA
CCHHEEEEEEEEECCCEEEECCCCHHHHCCCCCCEEEECCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1665988; 9097039; 9278503; 9748275 [H]