Click here to switch to the map view.

The map label for this gene is yqjI [C]

Identifier: 119870987

GI number: 119870987

Start: 5199410

End: 5200072

Strand: Direct

Name: yqjI [C]

Synonym: Mkms_4960

Alternate gene names: 119870987

Gene position: 5199410-5200072 (Clockwise)

Preceding gene: 119870986

Following gene: 119870988

Centisome position: 90.63

GC content: 71.64

Gene sequence:

>663_bases
GTGAGCAACCCATTCACCCCACCAGGCCCCTTCGGTTTCGGTCCCGTCGACCGGCGCAGGCAGGCCCGCCGCGAATTCCG
AGACCACTTGCGCGAGCACAGCGCCTCCGGTCCCGGTTTCGGCCGTGGCCCCGGTCGCGGTCCCGGCTTCGAGTTCGGGT
TCGACCCGCGGGGCGGTTTCGGCTTCGGCCCGGGCCCGCGCGGTCGGCGCGGCGGTGGCCGCGGACGCGGACGGCGCGGC
GACGTGCGCGCCGCGATCCTCACATTGCTGGGCGAACGGCCGATGCACGGCTACGAGATGATCCAGGAGATCGCCGAACG
CAGCGACGGCCTGTGGAAGCCGAGCCCCGGCTCGGTGTACCCGACGCTGCAACTCCTCGTCGACGAAGGGCTGATCGTCG
GCACCGAATCCGAGGGCAGCAAGAAGCTGTTCGAGCTGACCGACGACGGCCGGGCGGCCGCCGCCAAGATCGAGACCCCG
CCGTGGGAGCAGATCACCGACGACGCCGGCCCCGGTCACGCCGACCTGCGCAGTGCCGTCGGGCAGCTGGTGGGCGCCGT
CGCACAGTCGTCCTACGCCGCCAGCGAGGAGCAGCAGGCCCGCATACTCGAGATCGTCAACAACGCGCGCCGGGAGATCT
ACGGCGTCCTCGGCGAGGAATAG

Upstream 100 bases:

>100_bases
ATGCGCGGTGACAATGACCGTTGCATCGCGATAGTTTTCGATATATCGTCAACGTATCGGAAGTGCATTCGGTGCTTCTC
AGACGTTGAAGGACTTTCCC

Downstream 100 bases:

>100_bases
CGGGGATTTGGGCGTGGTTGGTTGCGCTGAGCGCGACCCACCACGCCGAAATCACGATAGGTAGGACATGCAGACTTTCT
CCCTCGGATCCCACTCGGTC

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: PadR Family Transcriptional Regulator; Transcriptional Regulator PadR-Like Family; Transcriptional Regulator; Transcriptional Regulator PadR Family Protein; Transcriptional Regulator Protein; Transcriptional Regulator PadR Family; Transcriptional Regulator PadR-Like; Padr Family Transcriptional Regulator; Transcriptional Regulator-Like Protein; PadR-Like Transcriptional Regulatory Protein; ParR Family Transcriptional Regulator; PadR Transcriptional Regulator PadR-Like Family

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSNPFTPPGPFGFGPVDRRRQARREFRDHLREHSASGPGFGRGPGRGPGFEFGFDPRGGFGFGPGPRGRRGGGRGRGRRG
DVRAAILTLLGERPMHGYEMIQEIAERSDGLWKPSPGSVYPTLQLLVDEGLIVGTESEGSKKLFELTDDGRAAAAKIETP
PWEQITDDAGPGHADLRSAVGQLVGAVAQSSYAASEEQQARILEIVNNARREIYGVLGEE

Sequences:

>Translated_220_residues
MSNPFTPPGPFGFGPVDRRRQARREFRDHLREHSASGPGFGRGPGRGPGFEFGFDPRGGFGFGPGPRGRRGGGRGRGRRG
DVRAAILTLLGERPMHGYEMIQEIAERSDGLWKPSPGSVYPTLQLLVDEGLIVGTESEGSKKLFELTDDGRAAAAKIETP
PWEQITDDAGPGHADLRSAVGQLVGAVAQSSYAASEEQQARILEIVNNARREIYGVLGEE
>Mature_219_residues
SNPFTPPGPFGFGPVDRRRQARREFRDHLREHSASGPGFGRGPGRGPGFEFGFDPRGGFGFGPGPRGRRGGGRGRGRRGD
VRAAILTLLGERPMHGYEMIQEIAERSDGLWKPSPGSVYPTLQLLVDEGLIVGTESEGSKKLFELTDDGRAAAAKIETPP
WEQITDDAGPGHADLRSAVGQLVGAVAQSSYAASEEQQARILEIVNNARREIYGVLGEE

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789452, Length=72, Percent_Identity=43.0555555555556, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23707; Mature: 23576

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNPFTPPGPFGFGPVDRRRQARREFRDHLREHSASGPGFGRGPGRGPGFEFGFDPRGGF
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
GFGPGPRGRRGGGRGRGRRGDVRAAILTLLGERPMHGYEMIQEIAERSDGLWKPSPGSVY
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHH
PTLQLLVDEGLIVGTESEGSKKLFELTDDGRAAAAKIETPPWEQITDDAGPGHADLRSAV
HHHHHHHHCCEEEECCCCCCCHHEEECCCCCCCEEECCCCCHHHHCCCCCCCHHHHHHHH
GQLVGAVAQSSYAASEEQQARILEIVNNARREIYGVLGEE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SNPFTPPGPFGFGPVDRRRQARREFRDHLREHSASGPGFGRGPGRGPGFEFGFDPRGGF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
GFGPGPRGRRGGGRGRGRRGDVRAAILTLLGERPMHGYEMIQEIAERSDGLWKPSPGSVY
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHH
PTLQLLVDEGLIVGTESEGSKKLFELTDDGRAAAAKIETPPWEQITDDAGPGHADLRSAV
HHHHHHHHCCEEEECCCCCCCHHEEECCCCCCCEEECCCCCHHHHCCCCCCCHHHHHHHH
GQLVGAVAQSSYAASEEQQARILEIVNNARREIYGVLGEE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA