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The map label for this gene is 119870979

Identifier: 119870979

GI number: 119870979

Start: 5187772

End: 5188560

Strand: Direct

Name: 119870979

Synonym: Mkms_4952

Alternate gene names: NA

Gene position: 5187772-5188560 (Clockwise)

Preceding gene: 119870977

Following gene: 119870984

Centisome position: 90.42

GC content: 70.6

Gene sequence:

>789_bases
ATGGTCTCGCAGCCCGAACCGGTGGTGACCGGTGACGCGGTGGTGCTCGACGTACAGATCGCCCAGCTGCCGATCCGGGC
GCTGTCGGCGATGGTCGACATCCTCGTCATCTTCGTCGGGTACACGCTGGGCCTGGTGCTGTGGGCGCTCACCCTCAGCG
ATTTCGACACCGCGCTGTCGGCGGCGGTCCTGATCATCTTCACCGTGCTCACGCTGGTGGGCTATCCGCTGGTGTTCGAG
ACCGCGACCCGTGGCCGGACGCTGGGCAAGATGGCGCTCGGGTTGCGCGTGGTGTCCGACGACGGTGGTCCGGAACGGTT
CCGGCAGGCCCTGTTCCGCGCGCTGGCCGGGTTCATCGAACTGTGGATGCTCGCCGGCGGGCCCGCCGCGGTGTGCAGCC
TGCTCTCGCCCAAGGGCAAGCGGATCGGCGACATCTTCGCCGGAACCGTCGTGATCAGCGAGCGCGCACCGCGGATGAGC
CCACCGCCGGTGATGCCGCCTGCGCTGGCGTGGTGGGCAGGCACGCTCGAACTGTCCGGCCTCAACGGGGAACAGGCCGA
GCGGGCCCGCCAATTCCTCTCGCGGGCACACCAACTGGAGCCCCGGCTGCGCGACGAGATGGCCTACCGCATCGCCGGCG
AAGTCGTCTCACGGATCTCGCCGCCACCGCCGCCCGGTACTCCACCGCAGTACGTGCTGGCCGCTGTGCTGGCCGAACGG
CACCGGCGCGCGCTGGCGCGTCTGGTGCCCACACCCCCGGCGTACCCGGGTCTCACTCCGCCGCGCTGA

Upstream 100 bases:

>100_bases
CGGCGCCGCTTGACGAGCTCGTCGAGCCGGTCCCAGGTGGGACGGTGGGCCAGCACGAACGCGTCGACATCCACACCGGC
CACCCTAGTAGCGTTGCCGT

Downstream 100 bases:

>100_bases
CCGTCCCGGGCGCGCCGGTGTTGGCCTGCCACAGTGCGCCGACATAGTCGGCGCGTTCGCGAGCCGTCTCGTCCACGCCG
AACGGCACGGCGAGCTTCCC

Product: RDD domain-containing protein

Products: NA

Alternate protein names: Integral Membrane Protein; RDD Domain-Containing Protein; RDD Family Protein; Transmembrane Protein; RDD Family Domain-Containing Protein; TransRDD Family Protein; Conserved Membrane Protein

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MVSQPEPVVTGDAVVLDVQIAQLPIRALSAMVDILVIFVGYTLGLVLWALTLSDFDTALSAAVLIIFTVLTLVGYPLVFE
TATRGRTLGKMALGLRVVSDDGGPERFRQALFRALAGFIELWMLAGGPAAVCSLLSPKGKRIGDIFAGTVVISERAPRMS
PPPVMPPALAWWAGTLELSGLNGEQAERARQFLSRAHQLEPRLRDEMAYRIAGEVVSRISPPPPPGTPPQYVLAAVLAER
HRRALARLVPTPPAYPGLTPPR

Sequences:

>Translated_262_residues
MVSQPEPVVTGDAVVLDVQIAQLPIRALSAMVDILVIFVGYTLGLVLWALTLSDFDTALSAAVLIIFTVLTLVGYPLVFE
TATRGRTLGKMALGLRVVSDDGGPERFRQALFRALAGFIELWMLAGGPAAVCSLLSPKGKRIGDIFAGTVVISERAPRMS
PPPVMPPALAWWAGTLELSGLNGEQAERARQFLSRAHQLEPRLRDEMAYRIAGEVVSRISPPPPPGTPPQYVLAAVLAER
HRRALARLVPTPPAYPGLTPPR
>Mature_262_residues
MVSQPEPVVTGDAVVLDVQIAQLPIRALSAMVDILVIFVGYTLGLVLWALTLSDFDTALSAAVLIIFTVLTLVGYPLVFE
TATRGRTLGKMALGLRVVSDDGGPERFRQALFRALAGFIELWMLAGGPAAVCSLLSPKGKRIGDIFAGTVVISERAPRMS
PPPVMPPALAWWAGTLELSGLNGEQAERARQFLSRAHQLEPRLRDEMAYRIAGEVVSRISPPPPPGTPPQYVLAAVLAER
HRRALARLVPTPPAYPGLTPPR

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28184; Mature: 28184

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSQPEPVVTGDAVVLDVQIAQLPIRALSAMVDILVIFVGYTLGLVLWALTLSDFDTALS
CCCCCCCCEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVLIIFTVLTLVGYPLVFETATRGRTLGKMALGLRVVSDDGGPERFRQALFRALAGFIE
HHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHH
LWMLAGGPAAVCSLLSPKGKRIGDIFAGTVVISERAPRMSPPPVMPPALAWWAGTLELSG
HHHHCCCHHHHHHHHCCCCCHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHEEECC
LNGEQAERARQFLSRAHQLEPRLRDEMAYRIAGEVVSRISPPPPPGTPPQYVLAAVLAER
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
HRRALARLVPTPPAYPGLTPPR
HHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MVSQPEPVVTGDAVVLDVQIAQLPIRALSAMVDILVIFVGYTLGLVLWALTLSDFDTALS
CCCCCCCCEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVLIIFTVLTLVGYPLVFETATRGRTLGKMALGLRVVSDDGGPERFRQALFRALAGFIE
HHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHH
LWMLAGGPAAVCSLLSPKGKRIGDIFAGTVVISERAPRMSPPPVMPPALAWWAGTLELSG
HHHHCCCHHHHHHHHCCCCCHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHEEECC
LNGEQAERARQFLSRAHQLEPRLRDEMAYRIAGEVVSRISPPPPPGTPPQYVLAAVLAER
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
HRRALARLVPTPPAYPGLTPPR
HHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA