| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119870977
Identifier: 119870977
GI number: 119870977
Start: 5185403
End: 5186752
Strand: Direct
Name: 119870977
Synonym: Mkms_4950
Alternate gene names: NA
Gene position: 5185403-5186752 (Clockwise)
Preceding gene: 119870976
Following gene: 119870979
Centisome position: 90.38
GC content: 74.37
Gene sequence:
>1350_bases GTGGTCCTCACCGGACGTGCGGCGCTGATCGCACTGCTGTGCGTGCTCCCGATCGCCGTGGCGCCCGCCCCGGGAGTGGC GTTCGTGGCGCTGTTCGGGGCGCTCGTCCTCGCGATCGTGGCGGACATCGCGCTCGCCGCGAGTCCCCGCCGGTTGCAGG TGACCCGCTCCGGGGACACCGCGGCCCGGCTCGGCCAGTCCGTCGATTCGGTGCTCGATGTGCACAACCCGGTCCGACGC CGGATCCGCGGCTCACTGCGCGACGCCTGGCCGCCGAGCGCGCACGGTGCGCCGCGCACGCACGAGCTCGATGTTCCTGC GGGACAACGGGTGACGCTGCGCACCTCGCTGCGCCCGACCCGCCGTGGTGACCTGCGGTCCGCGCTCGTCACGGCCCGCT CGATCGGTCCGCTCGGCCTGGCCGGCAGGCAGGCGTCCCACCGGGTGTCGGGTCAGATCCGGGTGCTGCCACCGTTCCTG TCGCGCAAGCACTTACCGTCACGGTTGGCGCGGTTGCGGGAACTCGACGGCTCGACACCCGCGCTGATCCGCGGCCAGGG CACCGAATTCGACTCGCTGCGCGAGTACGTCGTCGGCGACGACGTCCGCTCGATCGACTGGCGGGCGACGGCCCGGCGGG CCGACGTCGTCGTTCGCACGTGGCGGCCGGAACGCGATCAGCGCATCGTCATCGTCCTGGACACCGGCCGCACGTCGGCC GGGCGCGTCGGGGTCGACCCGACGGCAGCCCGATCGCCGGCTCCGCCGGCGGCCCAACACCCGGGCGGCTGGCCGCGCCT GGACTGGTCCATGGACGCCGCGCTGCTGCTGGCGGCGCTCGCCGCGCGCGCCGGCGACCACGTCGACTTCCTCGCCCACG ACCGGGTCACCCGCGCCGGGGTGTTCAACGCCTCGCGCAGCGAGCTACTCGCCCAGTTGGTGTCGGCGATGGCGCCGCTG CAGCCCGCGCTGGTCGAATCCGACCCCGCCGCGATGGCATCGGCGATCCAGCGCCGCGTGCGCCGTCGCGCGCTGGTGGT GCTGCTCACCGACCTCAACGCCTCGGCGCTCGAAGAAGGCCTGATAACGGTGCTGCCGCGACTCGCCGCCCGCCACCACG TGCTGATCGCGGCGGTCACCGACCCCCGCGTTGACCTGCTCGCCGCGGGCCGCGACGACGCCGCCGCCGTGTACGACGCG GCCGCCGCGGAACGGTCGCGCAATGACCGCAACCGCATCGCGGGCACGCTGCGCCAGGCGGGTGTGGACGTGGTGGACGC GCCACCCGAGGAACTCGCACCGGCACTCGCCGACCGCTACCTGCACATGAAGGCCACCGGCCGCCTCTGA
Upstream 100 bases:
>100_bases TGCGCCACCGCATCGCGCTGCGCCCGGAAGCCGAACTCGAAGGCGCCAGCCCCGACGCCGTACTCGACGGCATCCTCACG GCCGTCCCGGTCCCGCGCTA
Downstream 100 bases:
>100_bases TCAGCCGGTGGGCACCACGTCGGGCGCGTCTTCGAGGTCCCCCGATTCGCCCGCCCGGACGGCCTTGCGGCCGAAGTGCA CGACATAGGCCAGGAACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Protein
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MVLTGRAALIALLCVLPIAVAPAPGVAFVALFGALVLAIVADIALAASPRRLQVTRSGDTAARLGQSVDSVLDVHNPVRR RIRGSLRDAWPPSAHGAPRTHELDVPAGQRVTLRTSLRPTRRGDLRSALVTARSIGPLGLAGRQASHRVSGQIRVLPPFL SRKHLPSRLARLRELDGSTPALIRGQGTEFDSLREYVVGDDVRSIDWRATARRADVVVRTWRPERDQRIVIVLDTGRTSA GRVGVDPTAARSPAPPAAQHPGGWPRLDWSMDAALLLAALAARAGDHVDFLAHDRVTRAGVFNASRSELLAQLVSAMAPL QPALVESDPAAMASAIQRRVRRRALVVLLTDLNASALEEGLITVLPRLAARHHVLIAAVTDPRVDLLAAGRDDAAAVYDA AAAERSRNDRNRIAGTLRQAGVDVVDAPPEELAPALADRYLHMKATGRL
Sequences:
>Translated_449_residues MVLTGRAALIALLCVLPIAVAPAPGVAFVALFGALVLAIVADIALAASPRRLQVTRSGDTAARLGQSVDSVLDVHNPVRR RIRGSLRDAWPPSAHGAPRTHELDVPAGQRVTLRTSLRPTRRGDLRSALVTARSIGPLGLAGRQASHRVSGQIRVLPPFL SRKHLPSRLARLRELDGSTPALIRGQGTEFDSLREYVVGDDVRSIDWRATARRADVVVRTWRPERDQRIVIVLDTGRTSA GRVGVDPTAARSPAPPAAQHPGGWPRLDWSMDAALLLAALAARAGDHVDFLAHDRVTRAGVFNASRSELLAQLVSAMAPL QPALVESDPAAMASAIQRRVRRRALVVLLTDLNASALEEGLITVLPRLAARHHVLIAAVTDPRVDLLAAGRDDAAAVYDA AAAERSRNDRNRIAGTLRQAGVDVVDAPPEELAPALADRYLHMKATGRL >Mature_449_residues MVLTGRAALIALLCVLPIAVAPAPGVAFVALFGALVLAIVADIALAASPRRLQVTRSGDTAARLGQSVDSVLDVHNPVRR RIRGSLRDAWPPSAHGAPRTHELDVPAGQRVTLRTSLRPTRRGDLRSALVTARSIGPLGLAGRQASHRVSGQIRVLPPFL SRKHLPSRLARLRELDGSTPALIRGQGTEFDSLREYVVGDDVRSIDWRATARRADVVVRTWRPERDQRIVIVLDTGRTSA GRVGVDPTAARSPAPPAAQHPGGWPRLDWSMDAALLLAALAARAGDHVDFLAHDRVTRAGVFNASRSELLAQLVSAMAPL QPALVESDPAAMASAIQRRVRRRALVVLLTDLNASALEEGLITVLPRLAARHHVLIAAVTDPRVDLLAAGRDDAAAVYDA AAAERSRNDRNRIAGTLRQAGVDVVDAPPEELAPALADRYLHMKATGRL
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48056; Mature: 48056
Theoretical pI: Translated: 11.82; Mature: 11.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLTGRAALIALLCVLPIAVAPAPGVAFVALFGALVLAIVADIALAASPRRLQVTRSGDT CEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCH AARLGQSVDSVLDVHNPVRRRIRGSLRDAWPPSAHGAPRTHELDVPAGQRVTLRTSLRPT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCEEEEEECCCCC RRGDLRSALVTARSIGPLGLAGRQASHRVSGQIRVLPPFLSRKHLPSRLARLRELDGSTP CCHHHHHHHHHHHCCCCCCCCCCCCCHHCCCEEEEECCHHHHCCHHHHHHHHHHCCCCCC ALIRGQGTEFDSLREYVVGDDVRSIDWRATARRADVVVRTWRPERDQRIVIVLDTGRTSA EEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEECCCCCC GRVGVDPTAARSPAPPAAQHPGGWPRLDWSMDAALLLAALAARAGDHVDFLAHDRVTRAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCHHHHH VFNASRSELLAQLVSAMAPLQPALVESDPAAMASAIQRRVRRRALVVLLTDLNASALEEG CCCCHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHH LITVLPRLAARHHVLIAAVTDPRVDLLAAGRDDAAAVYDAAAAERSRNDRNRIAGTLRQA HHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHC GVDVVDAPPEELAPALADRYLHMKATGRL CCCCCCCCHHHHHHHHHHHEEEEEECCCC >Mature Secondary Structure MVLTGRAALIALLCVLPIAVAPAPGVAFVALFGALVLAIVADIALAASPRRLQVTRSGDT CEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCH AARLGQSVDSVLDVHNPVRRRIRGSLRDAWPPSAHGAPRTHELDVPAGQRVTLRTSLRPT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCEEEEEECCCCC RRGDLRSALVTARSIGPLGLAGRQASHRVSGQIRVLPPFLSRKHLPSRLARLRELDGSTP CCHHHHHHHHHHHCCCCCCCCCCCCCHHCCCEEEEECCHHHHCCHHHHHHHHHHCCCCCC ALIRGQGTEFDSLREYVVGDDVRSIDWRATARRADVVVRTWRPERDQRIVIVLDTGRTSA EEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEECCCCCC GRVGVDPTAARSPAPPAAQHPGGWPRLDWSMDAALLLAALAARAGDHVDFLAHDRVTRAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCHHHHH VFNASRSELLAQLVSAMAPLQPALVESDPAAMASAIQRRVRRRALVVLLTDLNASALEEG CCCCHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHH LITVLPRLAARHHVLIAAVTDPRVDLLAAGRDDAAAVYDAAAAERSRNDRNRIAGTLRQA HHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHC GVDVVDAPPEELAPALADRYLHMKATGRL CCCCCCCCHHHHHHHHHHHEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA