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The map label for this gene is 119870873

Identifier: 119870873

GI number: 119870873

Start: 5074341

End: 5075591

Strand: Direct

Name: 119870873

Synonym: Mkms_4845

Alternate gene names: NA

Gene position: 5074341-5075591 (Clockwise)

Preceding gene: 119870866

Following gene: 119870885

Centisome position: 88.45

GC content: 71.06

Gene sequence:

>1251_bases
ATGCGCAGCCCCATCGACCACGGCGCCGTCGCGGCGCTGGCCGACCAACCGCTCGACTGGCGGTACAAAGGGCTGCCGGC
CGAATGGTGGGGTGCCACTCCCGCGCAGATCTGCGGGGACTCACCGGAGTTGTTCTCGGCCGGCGTCCTCGGCCCGGTGT
GCGTGTTGCGGGCGTCCGCGCTGACACACAACCTGGTGACGATGGCGCGCTGGTGCCGCCGGCGCGGCGTGGAGTTGGCC
CCGCACGCCAAGACCCACCTGGCCCCGCAACTTCTGGCCCGCCAATTCGACGCGGGCGCCGTCGCCGTCACCGCCGCGAC
CGTGAGCCAGGTCCGGATCCTGCGCGCGTTCGGCGTTCGTGACGTGCTGCTCGCCAACGAGGTCGTCGACCGCGCGGGGC
TGGTGTGGCTGGCGCGCGAGATGGCGGCCGATCCGGAATTCCGGATGGTCTGCTGGGTGGATTCGCTGCGCGGTGTCGAG
CTGATGTCGGCGGCGTTGGCGGATGCGGGACGCCCGCTCGACGTGTGCGTGGAGGTCGGGATGGCCGGCGGGCGCACCGG
CTGCCGCACCACGGCCGATGTGGATGCGGTCGCGCGGGCGGTCACGGCGTCGCCGCGGCTGCGCCTGGTCGGCGTCGCGG
GGTACGAGGCGGCGTGCGGTCAGGACGTGAACGCGGAGGCGCTGGCCGTGGTGACCGGATACCTCACGGACGTGCGGACC
GCGGTCGAACGGTTGGCCACCGCGTTCGAGACGGACGACGTCCTGGTGACCGCAGGCGGTAGCACCTACTTCGACCTGGT
CACGGACGTGCTGACCGGCGGCTGGCCGGCCGGGCTGACGGTGCGCACCGTGCTGCGCAGCGGCTGTTACCTCACCCACG
ACGACGGCCTCTACGCGCGGACCTCACCGCTACAGCGGGCCGGTGCGGGCGGTCTCACAGCAGCGATGAGCGTGTGGGCA
CAGGTGATCTCGCGTCCGGAGGAGGAGTTGGCGCTGGTCGGGATGGGACGTCGCGACGTGTCGTTCGATCAGGGGCTGCC
GGTGCCGAGACTCCTGCCCGGCAGCGAGGTCACCCGACTCAACGACCAGCACGCCTATCTGCGGCTGGGCGCAGACGACA
CCGGTGTGCGGGTCGGCGACTGGCTGGAATTCGGTGTGTCGCATCCGTGTACGACGTTCGACAAATGGCCGATGATCCCG
GTGCTGGACGACGGCAACCGGGTCGTCGACCTGATCCGGACGTACTTCTAG

Upstream 100 bases:

>100_bases
GCCGCCGGTCGGTGTCACGGGGTGCCAGCTTAACGCTGCTCACGAGAACCCCCTGCACGCCGCGATCGCCTCCCGGTGTC
CATCCGCCTTTAATGAACGA

Downstream 100 bases:

>100_bases
CGGCGGCCGCGCTGGCCGTCGCGGTTGCGTTCGAACACCAGGCGCAGCCCGTCGAGGGTGAGGTGGCGGTCGTAATGCGC
GACCGTGTGCACGTCCGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MRSPIDHGAVAALADQPLDWRYKGLPAEWWGATPAQICGDSPELFSAGVLGPVCVLRASALTHNLVTMARWCRRRGVELA
PHAKTHLAPQLLARQFDAGAVAVTAATVSQVRILRAFGVRDVLLANEVVDRAGLVWLAREMAADPEFRMVCWVDSLRGVE
LMSAALADAGRPLDVCVEVGMAGGRTGCRTTADVDAVARAVTASPRLRLVGVAGYEAACGQDVNAEALAVVTGYLTDVRT
AVERLATAFETDDVLVTAGGSTYFDLVTDVLTGGWPAGLTVRTVLRSGCYLTHDDGLYARTSPLQRAGAGGLTAAMSVWA
QVISRPEEELALVGMGRRDVSFDQGLPVPRLLPGSEVTRLNDQHAYLRLGADDTGVRVGDWLEFGVSHPCTTFDKWPMIP
VLDDGNRVVDLIRTYF

Sequences:

>Translated_416_residues
MRSPIDHGAVAALADQPLDWRYKGLPAEWWGATPAQICGDSPELFSAGVLGPVCVLRASALTHNLVTMARWCRRRGVELA
PHAKTHLAPQLLARQFDAGAVAVTAATVSQVRILRAFGVRDVLLANEVVDRAGLVWLAREMAADPEFRMVCWVDSLRGVE
LMSAALADAGRPLDVCVEVGMAGGRTGCRTTADVDAVARAVTASPRLRLVGVAGYEAACGQDVNAEALAVVTGYLTDVRT
AVERLATAFETDDVLVTAGGSTYFDLVTDVLTGGWPAGLTVRTVLRSGCYLTHDDGLYARTSPLQRAGAGGLTAAMSVWA
QVISRPEEELALVGMGRRDVSFDQGLPVPRLLPGSEVTRLNDQHAYLRLGADDTGVRVGDWLEFGVSHPCTTFDKWPMIP
VLDDGNRVVDLIRTYF
>Mature_416_residues
MRSPIDHGAVAALADQPLDWRYKGLPAEWWGATPAQICGDSPELFSAGVLGPVCVLRASALTHNLVTMARWCRRRGVELA
PHAKTHLAPQLLARQFDAGAVAVTAATVSQVRILRAFGVRDVLLANEVVDRAGLVWLAREMAADPEFRMVCWVDSLRGVE
LMSAALADAGRPLDVCVEVGMAGGRTGCRTTADVDAVARAVTASPRLRLVGVAGYEAACGQDVNAEALAVVTGYLTDVRT
AVERLATAFETDDVLVTAGGSTYFDLVTDVLTGGWPAGLTVRTVLRSGCYLTHDDGLYARTSPLQRAGAGGLTAAMSVWA
QVISRPEEELALVGMGRRDVSFDQGLPVPRLLPGSEVTRLNDQHAYLRLGADDTGVRVGDWLEFGVSHPCTTFDKWPMIP
VLDDGNRVVDLIRTYF

Specific function: Catalyzes the reversible cleavage of D-theronine or D- allothreonine into glycine and acetaldehyde. Can also cleave D- beta-phenylserine, D-beta-hydroxy-alpha-aminovaleric acid, D-beta- 3,4-dihydroxyphenylserine and D-beta-3,4- methylenedioxyphenylserine

COG id: COG3616

COG function: function code E; Predicted amino acid aldolase or racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DSD1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: =4.1.2.42 [H]

Molecular weight: Translated: 44563; Mature: 44563

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSPIDHGAVAALADQPLDWRYKGLPAEWWGATPAQICGDSPELFSAGVLGPVCVLRASA
CCCCCCCCHHHHHHCCCCCCEECCCCHHHCCCCHHHHCCCCHHHHHCCCHHHHHHHHHHH
LTHNLVTMARWCRRRGVELAPHAKTHLAPQLLARQFDAGAVAVTAATVSQVRILRAFGVR
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCHH
DVLLANEVVDRAGLVWLAREMAADPEFRMVCWVDSLRGVELMSAALADAGRPLDVCVEVG
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHC
MAGGRTGCRTTADVDAVARAVTASPRLRLVGVAGYEAACGQDVNAEALAVVTGYLTDVRT
CCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHH
AVERLATAFETDDVLVTAGGSTYFDLVTDVLTGGWPAGLTVRTVLRSGCYLTHDDGLYAR
HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEECCCCEEC
TSPLQRAGAGGLTAAMSVWAQVISRPEEELALVGMGRRDVSFDQGLPVPRLLPGSEVTRL
CCCHHHCCCCHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCCCHHCC
NDQHAYLRLGADDTGVRVGDWLEFGVSHPCTTFDKWPMIPVLDDGNRVVDLIRTYF
CCCCEEEEECCCCCCCEEHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCC
>Mature Secondary Structure
MRSPIDHGAVAALADQPLDWRYKGLPAEWWGATPAQICGDSPELFSAGVLGPVCVLRASA
CCCCCCCCHHHHHHCCCCCCEECCCCHHHCCCCHHHHCCCCHHHHHCCCHHHHHHHHHHH
LTHNLVTMARWCRRRGVELAPHAKTHLAPQLLARQFDAGAVAVTAATVSQVRILRAFGVR
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCHH
DVLLANEVVDRAGLVWLAREMAADPEFRMVCWVDSLRGVELMSAALADAGRPLDVCVEVG
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHC
MAGGRTGCRTTADVDAVARAVTASPRLRLVGVAGYEAACGQDVNAEALAVVTGYLTDVRT
CCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHH
AVERLATAFETDDVLVTAGGSTYFDLVTDVLTGGWPAGLTVRTVLRSGCYLTHDDGLYAR
HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEECCCCEEC
TSPLQRAGAGGLTAAMSVWAQVISRPEEELALVGMGRRDVSFDQGLPVPRLLPGSEVTRL
CCCHHHCCCCHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCCCHHCC
NDQHAYLRLGADDTGVRVGDWLEFGVSHPCTTFDKWPMIPVLDDGNRVVDLIRTYF
CCCCEEEEECCCCCCCEEHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9642221 [H]