| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119870595
Identifier: 119870595
GI number: 119870595
Start: 4796893
End: 4798194
Strand: Direct
Name: 119870595
Synonym: Mkms_4566
Alternate gene names: NA
Gene position: 4796893-4798194 (Clockwise)
Preceding gene: 119870594
Following gene: 119870600
Centisome position: 83.61
GC content: 76.73
Gene sequence:
>1302_bases ATGAGTGGACGGCATCGCAAGCCCACGAATTCAACCGTCAGTGTCGCCAAGATCGCCTTCACCGGTGCTGTGATCGGTGG CGGGAGCATCGCCCTTGCCGGCCATGCCGGCGCCGCCACCGACAGCGAATGGGATCAGGTCGCCGCGTGTGAATCCAGCG GCAACTGGGCGATCAACACCGGCAACGGCTACCACGGCGGCCTTCAGTTCTCGCCCAGCACCTGGGCCGGACACGGCGGC GGCGAATTCGCCCCCGCCGCCTACATGGCCACCAAGGAAGAGCAGATCGCCGTCGCCGAGCGCGTGCTCGCCAGCCAGGG CAAGGGCGCATGGCCCTCCTGCGGCGGCCCGCTGTCCGGCGCGACGCCGCGCAACGTCGTCGACCAGCCGATCGATCCGG CCCCGCTGAACGGCATCCTGCCGCCTCCGCCGCCGATCGATCCGTTCGCACCGCCTCCGCCGCCGCCCGCACCGTTCGAC GCGCTGGCCGCACCCGCACCCGCGCCGCTGCCTCCCGAGGCCATGCCGCCGGCACCGGTGCCGCCGCCACCCGCACCGAT CGATGCGATGGCCGCACCCGCACCGGTTCCGCCGCCCGCCGCTCCGCTGGACGCGCCGCTGCCGCCTCCGCCCGCCCCGG TGGATCCCGCGGCGTGGGCCGCCCCGGCCCCGGCGCCGGTGGGCGCACCGCTGCCCCCGCCCGCCGACGTCCCCCTGCCG CCGGCCCCGCCGGTCGACAGTGCCGTCGCCGCGGCCGCCGCGAACTGGGACACCATCGCCGCTCCGGCACCGGATCAGCC GCAGCCGCAGAACTGGTCGCTCGGCGTGCCCGCGCCACTGCAGCCCGCTCCCGCGCCCCCGGCGCCGGCTCCCGCGCCCG CCCCGGCCCCCGCGCCCGTCGCCGCCCCGGCGCCGGATCCGCTGGCCCCGCTCAACGCGGTCGACATCCCGCAGCCGGTG TTCGACGCCGCCAACCAGGCCGCCAGCGGTCAGATCCCGGCGGTGCCCGCGGGCCTGCCCGCCGAGATGCCGCACCTGGC CAGCCCGCAGAACCTGCCTCCGGGTACGACGGTCGATCCCGCGCAGGTGCCCGGGCAGAGCCCGAACGTCACCTACCTCA AGGAGATCTGGCACGCGATCCAGACCCAGGAGATCTCGGGTGCGGATGCGCTGCTGGCGCTGACCCAGCGGCCGCTGACC ACCCCCGACACCCCGGGTGGGCCGCCGCCGAACCTTCCTGTCGCCCCGGCCCCGGCCCCGGCCCCGGCGCCCGCGCCGGC TCCGGTCCTGCCGCCCGCCTGA
Upstream 100 bases:
>100_bases GTGAAGCCGAGACCGGGCAACCGGAATCGGCCGGGTGACCTCTCCCACCCGAACCCGACAGCTGACCTCGCGGGCGCCGA CGAGAGGACCTATCGCACTT
Downstream 100 bases:
>100_bases GTCGGGTCAGGCCGAGTTCACCCACTCGTCGGAGCCGTCACCGAAGAACTGGTGCTTCCACACCGGTATCCGGTCCTTGA CGGCGTCGACGAGCCGGGAA
Product: transglycosylase domain-containing protein
Products: NA
Alternate protein names: Transglycosylase Domain-Containing Protein; Resuscitation-Promoting Factor RpfA; Resuscitation-Promoting Factor; Transglycosylase Domain Protein; Resuscitation-Promoting Factor RpfB; Transglycosylase-Like Protein; Peptidase; Transglycosylase Family Protein; Transglycosylase-Like Domain Protein; M23 Family Secreted Peptidase; M23 Peptidase Domain-Containing Protein; Resuscitation-Promoting Factor RpfC; Resuscitation-Promoting Factor RpfE; Resuscitation-Promoting Factor-Like Protein; Transglycosylase; Resuscitation-Promoting Factor Rpfe; Resuscitation-Promoting Factor RpfD; N-Acetylmuramoyl-L-Alanine Amidase; FG-GAP Repeat Domain-Containing Protein; Secreted Esterase; Resuscitation-Promoting Factor Rpfd; LOW QUALITY PROTEIN Lipoprotein; Resuscitation-Promoting Factor Rpfb; Secreted Transglycosydase; G5 Domain Transglycosylase; Resuscitation-Promoting Factor Rpfa; Vegetative Cell Wall; Cell Wall Catabolism Protein; FHA Domain-Containing Protein; Cell Wall Function Protein; Transglycosylase-Like Domain-Containing Protein; Resuscitation-Promoting Factor Rpfc; Lipoprotein; M24/M37 Family Peptidase
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MSGRHRKPTNSTVSVAKIAFTGAVIGGGSIALAGHAGAATDSEWDQVAACESSGNWAINTGNGYHGGLQFSPSTWAGHGG GEFAPAAYMATKEEQIAVAERVLASQGKGAWPSCGGPLSGATPRNVVDQPIDPAPLNGILPPPPPIDPFAPPPPPPAPFD ALAAPAPAPLPPEAMPPAPVPPPPAPIDAMAAPAPVPPPAAPLDAPLPPPPAPVDPAAWAAPAPAPVGAPLPPPADVPLP PAPPVDSAVAAAAANWDTIAAPAPDQPQPQNWSLGVPAPLQPAPAPPAPAPAPAPAPAPVAAPAPDPLAPLNAVDIPQPV FDAANQAASGQIPAVPAGLPAEMPHLASPQNLPPGTTVDPAQVPGQSPNVTYLKEIWHAIQTQEISGADALLALTQRPLT TPDTPGGPPPNLPVAPAPAPAPAPAPAPVLPPA
Sequences:
>Translated_433_residues MSGRHRKPTNSTVSVAKIAFTGAVIGGGSIALAGHAGAATDSEWDQVAACESSGNWAINTGNGYHGGLQFSPSTWAGHGG GEFAPAAYMATKEEQIAVAERVLASQGKGAWPSCGGPLSGATPRNVVDQPIDPAPLNGILPPPPPIDPFAPPPPPPAPFD ALAAPAPAPLPPEAMPPAPVPPPPAPIDAMAAPAPVPPPAAPLDAPLPPPPAPVDPAAWAAPAPAPVGAPLPPPADVPLP PAPPVDSAVAAAAANWDTIAAPAPDQPQPQNWSLGVPAPLQPAPAPPAPAPAPAPAPAPVAAPAPDPLAPLNAVDIPQPV FDAANQAASGQIPAVPAGLPAEMPHLASPQNLPPGTTVDPAQVPGQSPNVTYLKEIWHAIQTQEISGADALLALTQRPLT TPDTPGGPPPNLPVAPAPAPAPAPAPAPVLPPA >Mature_432_residues SGRHRKPTNSTVSVAKIAFTGAVIGGGSIALAGHAGAATDSEWDQVAACESSGNWAINTGNGYHGGLQFSPSTWAGHGGG EFAPAAYMATKEEQIAVAERVLASQGKGAWPSCGGPLSGATPRNVVDQPIDPAPLNGILPPPPPIDPFAPPPPPPAPFDA LAAPAPAPLPPEAMPPAPVPPPPAPIDAMAAPAPVPPPAAPLDAPLPPPPAPVDPAAWAAPAPAPVGAPLPPPADVPLPP APPVDSAVAAAAANWDTIAAPAPDQPQPQNWSLGVPAPLQPAPAPPAPAPAPAPAPAPVAAPAPDPLAPLNAVDIPQPVF DAANQAASGQIPAVPAGLPAEMPHLASPQNLPPGTTVDPAQVPGQSPNVTYLKEIWHAIQTQEISGADALLALTQRPLTT PDTPGGPPPNLPVAPAPAPAPAPAPAPVLPPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42526; Mature: 42395
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRHRKPTNSTVSVAKIAFTGAVIGGGSIALAGHAGAATDSEWDQVAACESSGNWAINT CCCCCCCCCCCCEEEEEEEEEEEEECCCCEEEECCCCCCCCCCHHHHHHCCCCCCEEEEC GNGYHGGLQFSPSTWAGHGGGEFAPAAYMATKEEQIAVAERVLASQGKGAWPSCGGPLSG CCCCCCCEEECCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC ATPRNVVDQPIDPAPLNGILPPPPPIDPFAPPPPPPAPFDALAAPAPAPLPPEAMPPAPV CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC PPPPAPIDAMAAPAPVPPPAAPLDAPLPPPPAPVDPAAWAAPAPAPVGAPLPPPADVPLP CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAPPVDSAVAAAAANWDTIAAPAPDQPQPQNWSLGVPAPLQPAPAPPAPAPAPAPAPAPV CCCCCHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AAPAPDPLAPLNAVDIPQPVFDAANQAASGQIPAVPAGLPAEMPHLASPQNLPPGTTVDP CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH AQVPGQSPNVTYLKEIWHAIQTQEISGADALLALTQRPLTTPDTPGGPPPNLPVAPAPAP HHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC APAPAPAPVLPPA CCCCCCCCCCCCC >Mature Secondary Structure SGRHRKPTNSTVSVAKIAFTGAVIGGGSIALAGHAGAATDSEWDQVAACESSGNWAINT CCCCCCCCCCCEEEEEEEEEEEEECCCCEEEECCCCCCCCCCHHHHHHCCCCCCEEEEC GNGYHGGLQFSPSTWAGHGGGEFAPAAYMATKEEQIAVAERVLASQGKGAWPSCGGPLSG CCCCCCCEEECCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC ATPRNVVDQPIDPAPLNGILPPPPPIDPFAPPPPPPAPFDALAAPAPAPLPPEAMPPAPV CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCC PPPPAPIDAMAAPAPVPPPAAPLDAPLPPPPAPVDPAAWAAPAPAPVGAPLPPPADVPLP CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAPPVDSAVAAAAANWDTIAAPAPDQPQPQNWSLGVPAPLQPAPAPPAPAPAPAPAPAPV CCCCCHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AAPAPDPLAPLNAVDIPQPVFDAANQAASGQIPAVPAGLPAEMPHLASPQNLPPGTTVDP CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH AQVPGQSPNVTYLKEIWHAIQTQEISGADALLALTQRPLTTPDTPGGPPPNLPVAPAPAP HHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC APAPAPAPVLPPA CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA