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The map label for this gene is yccF [H]

Identifier: 119870592

GI number: 119870592

Start: 4794740

End: 4795144

Strand: Direct

Name: yccF [H]

Synonym: Mkms_4563

Alternate gene names: 119870592

Gene position: 4794740-4795144 (Clockwise)

Preceding gene: 119870589

Following gene: 119870593

Centisome position: 83.57

GC content: 65.19

Gene sequence:

>405_bases
ATGCGAGTCCTACTGAACATCATCTGGTTGATTTTCGGCGGCCTGTGGCTTGCGCTGGGGTACGCGGTGGCGGGAATCCT
CTGCTTCGTCCTGATCATCACCATCCCGTTCGGATTCGCCGCCTTCCGGATCGCGTCCTACGCGCTGTGGCCGTTCGGCC
GCACCATCGTCGAGAAGCCGGGCCCTCGTCCCGGCGCGCTCATCGGCAATGTCATCTGGGTGCTGTTGTTCGGCATCTGG
CTGGCCATCGGCCACCTAGTCAGCGCGGCGGCGATGGCCATCACGATCATCGGCATTCCGCTCGCGCTGGCCAACCTCAA
GCTCATCCCGGTCTCGCTGGTGCCGCTCGGCAAAGAGATCGTGCCGGTCGACCCGCCCGTACCCGCCATGCGAGCCGCCG
CATGA

Upstream 100 bases:

>100_bases
CCGGGACGCGTCGAGGCCGATCCTACTCGGACTCGCCCGGCGACTTCACACCCTTATCGGTAGGCTTTGTGCCACCGCTG
AAGGAAGAAGTGCGCCCGAT

Downstream 100 bases:

>100_bases
CGGTGACCCCACTCGGTGTCCCCACCATCTCGCGTCCGGCGGCAGGCATGCCCACCACCGGACCGCTGGTCGACACCTTC
GGCCGCATCGCCACCGACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MRVLLNIIWLIFGGLWLALGYAVAGILCFVLIITIPFGFAAFRIASYALWPFGRTIVEKPGPRPGALIGNVIWVLLFGIW
LAIGHLVSAAAMAITIIGIPLALANLKLIPVSLVPLGKEIVPVDPPVPAMRAAA

Sequences:

>Translated_134_residues
MRVLLNIIWLIFGGLWLALGYAVAGILCFVLIITIPFGFAAFRIASYALWPFGRTIVEKPGPRPGALIGNVIWVLLFGIW
LAIGHLVSAAAMAITIIGIPLALANLKLIPVSLVPLGKEIVPVDPPVPAMRAAA
>Mature_134_residues
MRVLLNIIWLIFGGLWLALGYAVAGILCFVLIITIPFGFAAFRIASYALWPFGRTIVEKPGPRPGALIGNVIWVLLFGIW
LAIGHLVSAAAMAITIIGIPLALANLKLIPVSLVPLGKEIVPVDPPVPAMRAAA

Specific function: Unknown

COG id: COG3304

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787195, Length=134, Percent_Identity=32.089552238806, Blast_Score=79, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005185 [H]

Pfam domain/function: PF03733 DUF307 [H]

EC number: NA

Molecular weight: Translated: 14246; Mature: 14246

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLLNIIWLIFGGLWLALGYAVAGILCFVLIITIPFGFAAFRIASYALWPFGRTIVEKP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
GPRPGALIGNVIWVLLFGIWLAIGHLVSAAAMAITIIGIPLALANLKLIPVSLVPLGKEI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCC
VPVDPPVPAMRAAA
CCCCCCCCCCCCCC
>Mature Secondary Structure
MRVLLNIIWLIFGGLWLALGYAVAGILCFVLIITIPFGFAAFRIASYALWPFGRTIVEKP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
GPRPGALIGNVIWVLLFGIWLAIGHLVSAAAMAITIIGIPLALANLKLIPVSLVPLGKEI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCC
VPVDPPVPAMRAAA
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 2542273; 7984428 [H]