Click here to switch to the map view.

The map label for this gene is 119870496

Identifier: 119870496

GI number: 119870496

Start: 4697720

End: 4698169

Strand: Direct

Name: 119870496

Synonym: Mkms_4467

Alternate gene names: NA

Gene position: 4697720-4698169 (Clockwise)

Preceding gene: 119870494

Following gene: 119870498

Centisome position: 81.88

GC content: 65.11

Gene sequence:

>450_bases
GTGCTTCGCTTTGATCCGTTCAGTGACTTGGACACCTGGACCCGCGGTTTGCTGAGCAGTCAGACCGGATCGGATCGCAC
ACCCCGGTTCATGCCGATGGACCTCTGCAAGATCGACGACCACTACGTGCTGACCGCCGACCTTCCCGGCGTCGACCCCG
GCTCGGTCGACGTCAACGTCGACAACGGCACGCTCACCATCTCGGCGCGTCGCACCGCCCGATCCGAGGAATCCGCGCAG
TGGCTCGCCAACGAGCGGTTCTTCGGCAGCTACCGGCGGCAGCTGTCGCTCGGTGAGGGCGTCGATTCGGCGGCGATCTC
GGCGACCTACGAGAACGGTGTCCTGACCGTCACCATCCCGATGGCCGAACGCGCGAAACCACGCAAGATCGAAGTCGCCC
ACGGCGGCGGGCAGAAGTCCATTCAGCCGACCACCGTCGACGCCGAATAA

Upstream 100 bases:

>100_bases
ACTAGCACTCGCATGTGTCGAGTGCTAATCTGATGATGCACAGTGATTTGGCTGCCCGCCAGGGTGGCGGGCTTTCGGAT
CGACGAGGAGGTGAATTGCT

Downstream 100 bases:

>100_bases
CGGTTACCCGATTCGAGGCCGCGGGCAGTGCGCCCGCGGCCTCGCCATATCAGCGGGAGCCTCGCGACATCGCCGCGACG
AACGACCACACTGAGCACAG

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: Clone MAVC83 [H]

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MLRFDPFSDLDTWTRGLLSSQTGSDRTPRFMPMDLCKIDDHYVLTADLPGVDPGSVDVNVDNGTLTISARRTARSEESAQ
WLANERFFGSYRRQLSLGEGVDSAAISATYENGVLTVTIPMAERAKPRKIEVAHGGGQKSIQPTTVDAE

Sequences:

>Translated_149_residues
MLRFDPFSDLDTWTRGLLSSQTGSDRTPRFMPMDLCKIDDHYVLTADLPGVDPGSVDVNVDNGTLTISARRTARSEESAQ
WLANERFFGSYRRQLSLGEGVDSAAISATYENGVLTVTIPMAERAKPRKIEVAHGGGQKSIQPTTVDAE
>Mature_149_residues
MLRFDPFSDLDTWTRGLLSSQTGSDRTPRFMPMDLCKIDDHYVLTADLPGVDPGSVDVNVDNGTLTISARRTARSEESAQ
WLANERFFGSYRRQLSLGEGVDSAAISATYENGVLTVTIPMAERAKPRKIEVAHGGGQKSIQPTTVDAE

Specific function: Not known. This protein is one of the major immune reactive proteins in mycobacteria [H]

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 16320; Mature: 16320

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRFDPFSDLDTWTRGLLSSQTGSDRTPRFMPMDLCKIDDHYVLTADLPGVDPGSVDVNV
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCEEEEEE
DNGTLTISARRTARSEESAQWLANERFFGSYRRQLSLGEGVDSAAISATYENGVLTVTIP
CCCEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEC
MAERAKPRKIEVAHGGGQKSIQPTTVDAE
CCCCCCCCEEEEEECCCCCCCCCEEECCC
>Mature Secondary Structure
MLRFDPFSDLDTWTRGLLSSQTGSDRTPRFMPMDLCKIDDHYVLTADLPGVDPGSVDVNV
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCEEEEEE
DNGTLTISARRTARSEESAQWLANERFFGSYRRQLSLGEGVDSAAISATYENGVLTVTIP
CCCEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEC
MAERAKPRKIEVAHGGGQKSIQPTTVDAE
CCCCCCCCEEEEEECCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8454357 [H]