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The map label for this gene is yebA [C]

Identifier: 119870443

GI number: 119870443

Start: 4641466

End: 4642548

Strand: Direct

Name: yebA [C]

Synonym: Mkms_4414

Alternate gene names: 119870443

Gene position: 4641466-4642548 (Clockwise)

Preceding gene: 119870439

Following gene: 119870444

Centisome position: 80.9

GC content: 68.79

Gene sequence:

>1083_bases
TTGGCAGCGCATCGTTCGTCCCGGTCCCGCGAGGGAGCCTCGACGAATGCTCGCCAGCGGCAAGGCGTTTCGATCCCCGC
TGAACGCCCCGCAGAAGTCACCGACATCATCCCGTTCAACGAGTTCGGCGATCTGGACGACATCGACTTCCGGGACAGCA
CCGCCTTCGACCGGGACTCGCAAATAATCCGCGCCCCTGAACTCGACGATCTGCACGACACCGACGACCTGATTCCGCTG
CGGCTGGCGATCCCCGCGCAGTTCCGCGCCGAGGGTGACCCCGATACTCCGCGCAGGTCCCGCGCGTACCGCGAAAGCCA
CACCGACGTCAGCGACGGCGCCGCCGCCACCGACATCATCGACCTCCGTGGCCGCCGCGCCGCCCACCGCAAGGAGGCCG
AGGGCCCGATCAAGAGCCGTCTTGTGATCGCCGCGATGGCCGCAGGCGCGACCGCCGCGGGCGCCTACTCGATGACGCAG
AACACCGCTCCGGCCACCACCGACACGGTGCTGGCGTCGGGTGAGACCACCGTCGAGGGCGCGTCCATCACCGGATCCGT
CGACGGTATGCAGATCGTGTCGGTGGCCTCGACCGCCAACACCGCCGTGCACCACGAGGAGATCCAGAAGGCAGCCGCCT
TCGCCCAGGAGCGCGCCGAACGCGAGGCGCGCCAGATGAGGCCCCTCTACGTGATGCCGACGAAGGGTGTCTGGACGTCC
GGCTTCGGCTACCGCTGGGGTGTGCTGCACGGCGGGATCGACATCGCCGGGCCGATCGGCACGCCGATCCTCGCCGCCGC
CGACGGTGTCGTGATCGACGTCGGCCCGACCGCCGGTTACGGCGCCTGGGTCAAGCTGCGCCACGCCGACGGCACGGTGA
CGCTCTACGGTCACCTCAACACGTGGTCGGTGAGCATGGGCGAGCAGGTCATGGCCGGTGACCAGATCGCGACGATGGGC
AACCGCGGTAACTCGACCGGCCCGCACCTGCACTTCGAGGTGATGGTCGGCGGTTCGAACCGCATCGATCCGGTGGGGTG
GCTGTCCAAGCGGGGCATCTCCACCGGCAGCTATGTTGGCTGA

Upstream 100 bases:

>100_bases
CTGGTTCGCTCCCCTGGGTTGCCACGCTCATTGGGATTTGGTTAACGTGCCATCTGGTCTTGATAGGTAACGGTCAGATC
ACGACAAAGGATTCTTCAGG

Downstream 100 bases:

>100_bases
GTGAGTTCAGCTGACTCGACTGGCCGACCAGACGACTCGCCTCCTCAGCACGACCCCGAGACGCGCATCATCCGCCGTCA
CCCGACCGGCGCCCAGCCCG

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MAAHRSSRSREGASTNARQRQGVSIPAERPAEVTDIIPFNEFGDLDDIDFRDSTAFDRDSQIIRAPELDDLHDTDDLIPL
RLAIPAQFRAEGDPDTPRRSRAYRESHTDVSDGAAATDIIDLRGRRAAHRKEAEGPIKSRLVIAAMAAGATAAGAYSMTQ
NTAPATTDTVLASGETTVEGASITGSVDGMQIVSVASTANTAVHHEEIQKAAAFAQERAEREARQMRPLYVMPTKGVWTS
GFGYRWGVLHGGIDIAGPIGTPILAAADGVVIDVGPTAGYGAWVKLRHADGTVTLYGHLNTWSVSMGEQVMAGDQIATMG
NRGNSTGPHLHFEVMVGGSNRIDPVGWLSKRGISTGSYVG

Sequences:

>Translated_360_residues
MAAHRSSRSREGASTNARQRQGVSIPAERPAEVTDIIPFNEFGDLDDIDFRDSTAFDRDSQIIRAPELDDLHDTDDLIPL
RLAIPAQFRAEGDPDTPRRSRAYRESHTDVSDGAAATDIIDLRGRRAAHRKEAEGPIKSRLVIAAMAAGATAAGAYSMTQ
NTAPATTDTVLASGETTVEGASITGSVDGMQIVSVASTANTAVHHEEIQKAAAFAQERAEREARQMRPLYVMPTKGVWTS
GFGYRWGVLHGGIDIAGPIGTPILAAADGVVIDVGPTAGYGAWVKLRHADGTVTLYGHLNTWSVSMGEQVMAGDQIATMG
NRGNSTGPHLHFEVMVGGSNRIDPVGWLSKRGISTGSYVG
>Mature_359_residues
AAHRSSRSREGASTNARQRQGVSIPAERPAEVTDIIPFNEFGDLDDIDFRDSTAFDRDSQIIRAPELDDLHDTDDLIPLR
LAIPAQFRAEGDPDTPRRSRAYRESHTDVSDGAAATDIIDLRGRRAAHRKEAEGPIKSRLVIAAMAAGATAAGAYSMTQN
TAPATTDTVLASGETTVEGASITGSVDGMQIVSVASTANTAVHHEEIQKAAAFAQERAEREARQMRPLYVMPTKGVWTSG
FGYRWGVLHGGIDIAGPIGTPILAAADGVVIDVGPTAGYGAWVKLRHADGTVTLYGHLNTWSVSMGEQVMAGDQIATMGN
RGNSTGPHLHFEVMVGGSNRIDPVGWLSKRGISTGSYVG

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=87, Percent_Identity=44.8275862068966, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1789099, Length=120, Percent_Identity=39.1666666666667, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87082174, Length=102, Percent_Identity=40.1960784313725, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI87082297, Length=106, Percent_Identity=37.7358490566038, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 38286; Mature: 38155

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAHRSSRSREGASTNARQRQGVSIPAERPAEVTDIIPFNEFGDLDDIDFRDSTAFDRDS
CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC
QIIRAPELDDLHDTDDLIPLRLAIPAQFRAEGDPDTPRRSRAYRESHTDVSDGAAATDII
CEEECCCCCCCCCCCCEEEEEEECCCCEECCCCCCCCHHHHHHHHCCCCCCCCCCHHHHH
DLRGRRAAHRKEAEGPIKSRLVIAAMAAGATAAGAYSMTQNTAPATTDTVLASGETTVEG
HHCCCHHHHHHHCCCCHHHHEEEEEECCCCCCCCCEEECCCCCCCCCCEEEECCCCEECC
ASITGSVDGMQIVSVASTANTAVHHEEIQKAAAFAQERAEREARQMRPLYVMPTKGVWTS
CEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEC
GFGYRWGVLHGGIDIAGPIGTPILAAADGVVIDVGPTAGYGAWVKLRHADGTVTLYGHLN
CCCEEEEEEECCEEECCCCCCCCEEECCCEEEECCCCCCCCEEEEEEECCCEEEEEEECC
TWSVSMGEQVMAGDQIATMGNRGNSTGPHLHFEVMVGGSNRIDPVGWLSKRGISTGSYVG
EEEECCCCHHHCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AAHRSSRSREGASTNARQRQGVSIPAERPAEVTDIIPFNEFGDLDDIDFRDSTAFDRDS
CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC
QIIRAPELDDLHDTDDLIPLRLAIPAQFRAEGDPDTPRRSRAYRESHTDVSDGAAATDII
CEEECCCCCCCCCCCCEEEEEEECCCCEECCCCCCCCHHHHHHHHCCCCCCCCCCHHHHH
DLRGRRAAHRKEAEGPIKSRLVIAAMAAGATAAGAYSMTQNTAPATTDTVLASGETTVEG
HHCCCHHHHHHHCCCCHHHHEEEEEECCCCCCCCCEEECCCCCCCCCCEEEECCCCEECC
ASITGSVDGMQIVSVASTANTAVHHEEIQKAAAFAQERAEREARQMRPLYVMPTKGVWTS
CEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEC
GFGYRWGVLHGGIDIAGPIGTPILAAADGVVIDVGPTAGYGAWVKLRHADGTVTLYGHLN
CCCEEEEEEECCEEECCCCCCCCEEECCCEEEECCCCCCCCEEEEEEECCCEEEEEEECC
TWSVSMGEQVMAGDQIATMGNRGNSTGPHLHFEVMVGGSNRIDPVGWLSKRGISTGSYVG
EEEECCCCHHHCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]