Click here to switch to the map view.

The map label for this gene is 119870407

Identifier: 119870407

GI number: 119870407

Start: 4598891

End: 4599223

Strand: Direct

Name: 119870407

Synonym: Mkms_4378

Alternate gene names: NA

Gene position: 4598891-4599223 (Clockwise)

Preceding gene: 119870406

Following gene: 119870408

Centisome position: 80.16

GC content: 63.66

Gene sequence:

>333_bases
GTGCCTACCTATTCCTATGCGTGCACCGAATGCGCCAATCGATTCGATGCCGTGCAGGCGTTCAGCGACGATGCGCTGAC
CGAATGCCCCCAGTGCAGCGGACGGCTCCGCAAGCTCTTCGGGAAGGTCGGAGTGGTGTTCAAGGGCAGCGGCTTCTACC
GCACCGACAGCCGAGAGTCCACGAAGACGTCGACCAACGGCTCGGCCAAGAGCTCTTCGGAGTCGACGAGCTCCTCGGAG
AAGTCCAGCTCGTCGTCGTCGAGCGATTCCTCATCGAGTTCCTCATCGAGTTCGGCGTCGAGTTCCGCGCCGGCCGCGGC
CGCCTCCAGCTGA

Upstream 100 bases:

>100_bases
GTGTGGACTGGTCGCTCTGCGGGAATCACAGTGACCGCGTAGCGGTTCTAGCACTTGAGCCGGTAGAGTGCTAACAAGTT
TGACGACCTCGGAGGTTTTC

Downstream 100 bases:

>100_bases
TCCGGAAGTTATCCACAGGCCCGCGCTGACCAGGCGCGCGGGGCGGCGTCTGCCGCCTAGCGTGGCGGTGTGGGCGAATC
CCTCGATCCGACACCGATCG

Product: FmdB family regulatory protein

Products: NA

Alternate protein names: FmdB Family Regulatory Protein; Conserved Serine Rich Protein; Regulatory Protein Fmdb Family; Serine Rich Protein; FmdB Family Transcriptional Regulator; Type I Antifreeze Protein

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MPTYSYACTECANRFDAVQAFSDDALTECPQCSGRLRKLFGKVGVVFKGSGFYRTDSRESTKTSTNGSAKSSSESTSSSE
KSSSSSSSDSSSSSSSSSASSSAPAAAASS

Sequences:

>Translated_110_residues
MPTYSYACTECANRFDAVQAFSDDALTECPQCSGRLRKLFGKVGVVFKGSGFYRTDSRESTKTSTNGSAKSSSESTSSSE
KSSSSSSSDSSSSSSSSSASSSAPAAAASS
>Mature_109_residues
PTYSYACTECANRFDAVQAFSDDALTECPQCSGRLRKLFGKVGVVFKGSGFYRTDSRESTKTSTNGSAKSSSESTSSSEK
SSSSSSSDSSSSSSSSSASSSAPAAAASS

Specific function: Unknown

COG id: COG2331

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11209; Mature: 11078

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTYSYACTECANRFDAVQAFSDDALTECPQCSGRLRKLFGKVGVVFKGSGFYRTDSRES
CCCCHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHCEEECCCCCEECCCCCC
TKTSTNGSAKSSSESTSSSEKSSSSSSSDSSSSSSSSSASSSAPAAAASS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PTYSYACTECANRFDAVQAFSDDALTECPQCSGRLRKLFGKVGVVFKGSGFYRTDSRES
CCCHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHCEEECCCCCEECCCCCC
TKTSTNGSAKSSSESTSSSEKSSSSSSSDSSSSSSSSSASSSAPAAAASS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA