| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119870390
Identifier: 119870390
GI number: 119870390
Start: 4582555
End: 4583424
Strand: Direct
Name: 119870390
Synonym: Mkms_4361
Alternate gene names: NA
Gene position: 4582555-4583424 (Clockwise)
Preceding gene: 119870389
Following gene: 119870392
Centisome position: 79.87
GC content: 65.4
Gene sequence:
>870_bases ATGGGAACGATAATTCTGGGCAGTGAAGCAATCGATCGCGGCGAAGTCTCGCGCCAGGGCCTGCGGTCGGCCTACCGGAC GATTTTCCCGGATGTGTACATACCCGCAGTCGCGGAGCCGTCGCTGTACGCCAACACCGTCGGCGCCTGGCTGTGGTCGA AACGCCGCGCCGTGATCACCGGTAAGGCTGCAGCGGCACTGCACGGCGCTGAGTGGGTCGACGAGAACTCCCCGGTCGAG TTGATATGGCGAAACAACCGCCCACCGCACGGAATCGTCACCCGCAACGACCGATTCACGTGTGACGAGGTGGTCGAGAT CTACGGCCTGGCAGTCGCGTCGATCCAGCGAACCGCTTTCGACCTCGGGCGGTTCCTCCCACGCGGCGAGGCCGTCGCGC ATCTCGATGCGCTCGCACGGGCTACTGGTCTTGCGGTCGACCACGTGCTCCCCTTGGCCGAACAGTACCGTGGCGCGCGC GGGGTTCGGCGCTGCCGAGAGGCGCTCGGACTGATGGACGGCGGCGCCCAGTCTCCGAGAGAGACGTGGCTGCGGTTGTT GCTGATCGACGCCGGATTCCCGCGGCCGACCACGCAGATCCCGGTGCTGGACGATTACGGCGACCCGTTCGCCCACCTCG ACATGGGCTGGGAGAGGCTCATGATCGCCGTGGAATACGACGGCAAGCAGCACCAGATCGACCGCTCACGTTATGTGTGG GACCACAAGCGGTTGACCATGTTGCGACGCCGCGGATGGTTGCACATTCGGGTGATCAGCGAGGATCGCCCCTACGACAT CCTGCGGCGGGTGCGCGAGGCGTGGACCCAACGCGAGACAGCACAGAGGGTGGTCAACCGTTCGGCTTGA
Upstream 100 bases:
>100_bases GTCTCGGCCGCGAAACAGCATTCCCTGTCGTCAAGCGCGCCTGTTGACAACCCAGGTTACTGCCTCGCGGTCTGTCAGTA GGGCTGAGCATCATCTGCGC
Downstream 100 bases:
>100_bases CGACCGGGAATGCTGTTTCGCGCTTTCGCGCCCCCGCACCCCCGCAGGCTACAGCGGGTCGCGGGCGGCCGGGCAGGACA TACACCGCGGCCCGCCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MGTIILGSEAIDRGEVSRQGLRSAYRTIFPDVYIPAVAEPSLYANTVGAWLWSKRRAVITGKAAAALHGAEWVDENSPVE LIWRNNRPPHGIVTRNDRFTCDEVVEIYGLAVASIQRTAFDLGRFLPRGEAVAHLDALARATGLAVDHVLPLAEQYRGAR GVRRCREALGLMDGGAQSPRETWLRLLLIDAGFPRPTTQIPVLDDYGDPFAHLDMGWERLMIAVEYDGKQHQIDRSRYVW DHKRLTMLRRRGWLHIRVISEDRPYDILRRVREAWTQRETAQRVVNRSA
Sequences:
>Translated_289_residues MGTIILGSEAIDRGEVSRQGLRSAYRTIFPDVYIPAVAEPSLYANTVGAWLWSKRRAVITGKAAAALHGAEWVDENSPVE LIWRNNRPPHGIVTRNDRFTCDEVVEIYGLAVASIQRTAFDLGRFLPRGEAVAHLDALARATGLAVDHVLPLAEQYRGAR GVRRCREALGLMDGGAQSPRETWLRLLLIDAGFPRPTTQIPVLDDYGDPFAHLDMGWERLMIAVEYDGKQHQIDRSRYVW DHKRLTMLRRRGWLHIRVISEDRPYDILRRVREAWTQRETAQRVVNRSA >Mature_288_residues GTIILGSEAIDRGEVSRQGLRSAYRTIFPDVYIPAVAEPSLYANTVGAWLWSKRRAVITGKAAAALHGAEWVDENSPVEL IWRNNRPPHGIVTRNDRFTCDEVVEIYGLAVASIQRTAFDLGRFLPRGEAVAHLDALARATGLAVDHVLPLAEQYRGARG VRRCREALGLMDGGAQSPRETWLRLLLIDAGFPRPTTQIPVLDDYGDPFAHLDMGWERLMIAVEYDGKQHQIDRSRYVWD HKRLTMLRRRGWLHIRVISEDRPYDILRRVREAWTQRETAQRVVNRSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011335 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32868; Mature: 32737
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTIILGSEAIDRGEVSRQGLRSAYRTIFPDVYIPAVAEPSLYANTVGAWLWSKRRAVIT CCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCCEEEE GKAAAALHGAEWVDENSPVELIWRNNRPPHGIVTRNDRFTCDEVVEIYGLAVASIQRTAF CCHHHHHHCHHHCCCCCCEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHH DLGRFLPRGEAVAHLDALARATGLAVDHVLPLAEQYRGARGVRRCREALGLMDGGAQSPR HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHH ETWLRLLLIDAGFPRPTTQIPVLDDYGDPFAHLDMGWERLMIAVEYDGKQHQIDRSRYVW HHHHHHHEEECCCCCCCCCCCEECCCCCCHHHHHCCHHHEEEEEEECCCHHHCHHHHHHH DHKRLTMLRRRGWLHIRVISEDRPYDILRRVREAWTQRETAQRVVNRSA HHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GTIILGSEAIDRGEVSRQGLRSAYRTIFPDVYIPAVAEPSLYANTVGAWLWSKRRAVIT CEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCCEEEE GKAAAALHGAEWVDENSPVELIWRNNRPPHGIVTRNDRFTCDEVVEIYGLAVASIQRTAF CCHHHHHHCHHHCCCCCCEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHH DLGRFLPRGEAVAHLDALARATGLAVDHVLPLAEQYRGARGVRRCREALGLMDGGAQSPR HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHH ETWLRLLLIDAGFPRPTTQIPVLDDYGDPFAHLDMGWERLMIAVEYDGKQHQIDRSRYVW HHHHHHHEEECCCCCCCCCCCEECCCCCCHHHHHCCHHHEEEEEEECCCHHHCHHHHHHH DHKRLTMLRRRGWLHIRVISEDRPYDILRRVREAWTQRETAQRVVNRSA HHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]