| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119870299
Identifier: 119870299
GI number: 119870299
Start: 4493678
End: 4494283
Strand: Direct
Name: 119870299
Synonym: Mkms_4269
Alternate gene names: NA
Gene position: 4493678-4494283 (Clockwise)
Preceding gene: 119870294
Following gene: 119870300
Centisome position: 78.32
GC content: 69.97
Gene sequence:
>606_bases ATGGCTTTCATGTCGGCGCCCGCCCCCGCCCGGGACCGTCGCGTCCGTCGGTCGCGCGCCGCGCTGATCCAGGCGGCGAT CGACGTGGTCACCGGACGCGACACCGCCTCGGTCGCGCTCAGCGATATCGCCGAGGCCGCCGGCGTCACCCGCAAGGTGG CCTATCAGCAGTTCGGCGACCGCGATGCGCTGCTGATGGAAGCGGCGCTGGATCTGATGCGCCGGGAAGTGGTGCCGCAG GTGATCAACCTGCCGCCGGGCAAGCCACGTGCCCTGGCTGCGCTCCGCCACTTCGCCGACCACCGTCGCTTCTACCGGGC GGTGCTGACCGGCCCGAACGCGGTGAGCCTGGGCGCCGGGCTGGCGGATCTGGTGCTACCGCGCACCCGGGACCGCATCC GCGACCTCCACGGCGACGACCTCGACCCCCAGTTGGTGGCCGATCTGGCCGTTCAGATCAACGGCGGCATCCTCGCGATG ATCACCGCGTGGTTGATCGAGGGCGATGACCCGTTGGACCCCGACGACTTCGCCGAACGGATGTTGCGGGTGCAGTACTT CTTGATTCCCGAGGGCAGGCGTGATGCCGACGAGGGGCGTCGTTGA
Upstream 100 bases:
>100_bases GGTACCGCGTCCGCACCGCACAAGGCCCGCGGACCGGCACTATGGAACAACCGTATCTTATGGAACACTTGTTCCCTAAC GCACAGGATATAACTGTGAG
Downstream 100 bases:
>100_bases CGAGACTGTCGACGCGACCGAGCAGTTGATTGCCCTGCCGAGTATGGAATCCGCTCGCGGCGTCTGCGCATTGGGGCCGG GCATCGAGAAGTCCCAGGTT
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Regulatory Protein TetR
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MAFMSAPAPARDRRVRRSRAALIQAAIDVVTGRDTASVALSDIAEAAGVTRKVAYQQFGDRDALLMEAALDLMRREVVPQ VINLPPGKPRALAALRHFADHRRFYRAVLTGPNAVSLGAGLADLVLPRTRDRIRDLHGDDLDPQLVADLAVQINGGILAM ITAWLIEGDDPLDPDDFAERMLRVQYFLIPEGRRDADEGRR
Sequences:
>Translated_201_residues MAFMSAPAPARDRRVRRSRAALIQAAIDVVTGRDTASVALSDIAEAAGVTRKVAYQQFGDRDALLMEAALDLMRREVVPQ VINLPPGKPRALAALRHFADHRRFYRAVLTGPNAVSLGAGLADLVLPRTRDRIRDLHGDDLDPQLVADLAVQINGGILAM ITAWLIEGDDPLDPDDFAERMLRVQYFLIPEGRRDADEGRR >Mature_200_residues AFMSAPAPARDRRVRRSRAALIQAAIDVVTGRDTASVALSDIAEAAGVTRKVAYQQFGDRDALLMEAALDLMRREVVPQV INLPPGKPRALAALRHFADHRRFYRAVLTGPNAVSLGAGLADLVLPRTRDRIRDLHGDDLDPQLVADLAVQINGGILAMI TAWLIEGDDPLDPDDFAERMLRVQYFLIPEGRRDADEGRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22142; Mature: 22011
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFMSAPAPARDRRVRRSRAALIQAAIDVVTGRDTASVALSDIAEAAGVTRKVAYQQFGD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC RDALLMEAALDLMRREVVPQVINLPPGKPRALAALRHFADHRRFYRAVLTGPNAVSLGAG HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC LADLVLPRTRDRIRDLHGDDLDPQLVADLAVQINGGILAMITAWLIEGDDPLDPDDFAER HHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHH MLRVQYFLIPEGRRDADEGRR HHHHHHEECCCCCCCCCCCCC >Mature Secondary Structure AFMSAPAPARDRRVRRSRAALIQAAIDVVTGRDTASVALSDIAEAAGVTRKVAYQQFGD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC RDALLMEAALDLMRREVVPQVINLPPGKPRALAALRHFADHRRFYRAVLTGPNAVSLGAG HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCC LADLVLPRTRDRIRDLHGDDLDPQLVADLAVQINGGILAMITAWLIEGDDPLDPDDFAER HHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHH MLRVQYFLIPEGRRDADEGRR HHHHHHEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA