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The map label for this gene is ychK [C]

Identifier: 119870266

GI number: 119870266

Start: 4462511

End: 4463545

Strand: Direct

Name: ychK [C]

Synonym: Mkms_4236

Alternate gene names: 119870266

Gene position: 4462511-4463545 (Clockwise)

Preceding gene: 119870265

Following gene: 119870268

Centisome position: 77.78

GC content: 68.99

Gene sequence:

>1035_bases
ATGACCAAACGCGTCGCTCTCGTGCTCGGAAGCGGCGGGGCGCGTGGGTATGCGCATGTCGGCGTCATCCACGAACTGCG
GGACCGCGGTTATGAGGTCGTGGGCATCTCGGGCTCCTCGATGGGCGCACTGGTCGGCGGGTTGCAGGCCGCGGGCAAGC
TCGACGAGTACGCCGAGTGGGCGAAGTCGCTGACTCAGCGCGCAGTCCTGCGCCTGCTGGATCCGTCACTCACCGCGCCG
GGCGTACTGCGTGCGGAGAAGATCATCGACGCGGTCCGCGAGCTGCTCGGCGACGTGTGCATCGAGGACCTGCCGGTGCC
GTATACGGCCGTCACGACGGACCTGATCGCCGGCCGGTCGGTGTGGCTGCAGCGCGGGCCGGTGGACGCGGCGATCCGCG
CGTCGATCGCGATCCCCGGCGTCATCACACCCCATGTGCTCGACGGGCGGTTGCTCGCCGACGGTGGCATCCTCGATCCG
TTGCCGATGGCGCCCGTCGCCGCGGTGAACGCCGACGTGACGATCGCGGTGAGCCTCGGTGGTAGCGAGTCCGGTGGCGG
CGAACCCGACGACGACGCGGCACATTCGACGGCCGACTGGCTGAACCGCTTGCTGCGCAGCACTTCTGCGCTACTGGACT
CGAAGTCCGCGCGCGCGGTCCTCGACACCCCGGCGGTGCGGTCCATGATCAGCCGCTTCGGCACCACCCCCGAGGACGAG
GACGGGGAGAGCACCGGCGAGCCCGAAACAGAAACCAGCGCCGACCAACTCGTCGACTCCGCCAAGGAGTTGGCGCTGCC
GAGACTGGGCAGTTTCGCCGTGATGAACCGCACCATCGACATCGCCCAGGCGGCGCTGGCCCGCCACACCCTCGCGGCCT
ATCCGCCCGACCTGCTCATCGAGATTCCCCGATCAGCTTGTCGCAGTTTGGATTTCCACCGCGCAGCCGAGGTCATCGAG
CTGGGCAGGCAGTTGGCCGTCGAGGCGCTCGACCAGTTCGAGCAGCCGCAGGCGGCCTCGCTGCTTCAGACCTGA

Upstream 100 bases:

>100_bases
GGACGTCAGTCAGCGGTGATCGTGGCCGCGGAGGCCGCCGCCGACGAACTATGCGGCTGACTTCGAATCACGGTGCACGA
AAAGGGCGGAGAATGGCGCC

Downstream 100 bases:

>100_bases
CCCGCCAGGAAGTCGGTGACGCCGGCGGCCACCCGGCGGCCCTGCGCCCGGCCGGCCTGCGCGGACGGTATCCGGCACGC
CGGGTCGAGCGGGTTCGCGC

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MTKRVALVLGSGGARGYAHVGVIHELRDRGYEVVGISGSSMGALVGGLQAAGKLDEYAEWAKSLTQRAVLRLLDPSLTAP
GVLRAEKIIDAVRELLGDVCIEDLPVPYTAVTTDLIAGRSVWLQRGPVDAAIRASIAIPGVITPHVLDGRLLADGGILDP
LPMAPVAAVNADVTIAVSLGGSESGGGEPDDDAAHSTADWLNRLLRSTSALLDSKSARAVLDTPAVRSMISRFGTTPEDE
DGESTGEPETETSADQLVDSAKELALPRLGSFAVMNRTIDIAQAALARHTLAAYPPDLLIEIPRSACRSLDFHRAAEVIE
LGRQLAVEALDQFEQPQAASLLQT

Sequences:

>Translated_344_residues
MTKRVALVLGSGGARGYAHVGVIHELRDRGYEVVGISGSSMGALVGGLQAAGKLDEYAEWAKSLTQRAVLRLLDPSLTAP
GVLRAEKIIDAVRELLGDVCIEDLPVPYTAVTTDLIAGRSVWLQRGPVDAAIRASIAIPGVITPHVLDGRLLADGGILDP
LPMAPVAAVNADVTIAVSLGGSESGGGEPDDDAAHSTADWLNRLLRSTSALLDSKSARAVLDTPAVRSMISRFGTTPEDE
DGESTGEPETETSADQLVDSAKELALPRLGSFAVMNRTIDIAQAALARHTLAAYPPDLLIEIPRSACRSLDFHRAAEVIE
LGRQLAVEALDQFEQPQAASLLQT
>Mature_343_residues
TKRVALVLGSGGARGYAHVGVIHELRDRGYEVVGISGSSMGALVGGLQAAGKLDEYAEWAKSLTQRAVLRLLDPSLTAPG
VLRAEKIIDAVRELLGDVCIEDLPVPYTAVTTDLIAGRSVWLQRGPVDAAIRASIAIPGVITPHVLDGRLLADGGILDPL
PMAPVAAVNADVTIAVSLGGSESGGGEPDDDAAHSTADWLNRLLRSTSALLDSKSARAVLDTPAVRSMISRFGTTPEDED
GESTGEPETETSADQLVDSAKELALPRLGSFAVMNRTIDIAQAALARHTLAAYPPDLLIEIPRSACRSLDFHRAAEVIEL
GRQLAVEALDQFEQPQAASLLQT

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656041, Length=187, Percent_Identity=34.7593582887701, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI116256487, Length=187, Percent_Identity=34.7593582887701, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI260656039, Length=187, Percent_Identity=34.7593582887701, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI260656037, Length=187, Percent_Identity=34.7593582887701, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI260656043, Length=187, Percent_Identity=34.7593582887701, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI148727335, Length=186, Percent_Identity=34.4086021505376, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI148727290, Length=186, Percent_Identity=34.4086021505376, Blast_Score=87, Evalue=2e-17,
Organism=Escherichia coli, GI226510936, Length=326, Percent_Identity=31.9018404907975, Blast_Score=154, Evalue=5e-39,
Organism=Caenorhabditis elegans, GI193204778, Length=173, Percent_Identity=29.4797687861272, Blast_Score=68, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI71997299, Length=169, Percent_Identity=28.4023668639053, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71997289, Length=169, Percent_Identity=28.4023668639053, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323581, Length=206, Percent_Identity=29.126213592233, Blast_Score=80, Evalue=3e-16,
Organism=Drosophila melanogaster, GI28571388, Length=186, Percent_Identity=32.258064516129, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI281376913, Length=186, Percent_Identity=32.7956989247312, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 36157; Mature: 36026

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRVALVLGSGGARGYAHVGVIHELRDRGYEVVGISGSSMGALVGGLQAAGKLDEYAEW
CCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHH
AKSLTQRAVLRLLDPSLTAPGVLRAEKIIDAVRELLGDVCIEDLPVPYTAVTTDLIAGRS
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCH
VWLQRGPVDAAIRASIAIPGVITPHVLDGRLLADGGILDPLPMAPVAAVNADVTIAVSLG
HHHCCCCCCHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCEEEEEEEC
GSESGGGEPDDDAAHSTADWLNRLLRSTSALLDSKSARAVLDTPAVRSMISRFGTTPEDE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHCCCCCCC
DGESTGEPETETSADQLVDSAKELALPRLGSFAVMNRTIDIAQAALARHTLAAYPPDLLI
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
EIPRSACRSLDFHRAAEVIELGRQLAVEALDQFEQPQAASLLQT
HCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
>Mature Secondary Structure 
TKRVALVLGSGGARGYAHVGVIHELRDRGYEVVGISGSSMGALVGGLQAAGKLDEYAEW
CCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHH
AKSLTQRAVLRLLDPSLTAPGVLRAEKIIDAVRELLGDVCIEDLPVPYTAVTTDLIAGRS
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCH
VWLQRGPVDAAIRASIAIPGVITPHVLDGRLLADGGILDPLPMAPVAAVNADVTIAVSLG
HHHCCCCCCHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCEEEEEEEC
GSESGGGEPDDDAAHSTADWLNRLLRSTSALLDSKSARAVLDTPAVRSMISRFGTTPEDE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHCCCCCCC
DGESTGEPETETSADQLVDSAKELALPRLGSFAVMNRTIDIAQAALARHTLAAYPPDLLI
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
EIPRSACRSLDFHRAAEVIELGRQLAVEALDQFEQPQAASLLQT
HCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]