| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119870132
Identifier: 119870132
GI number: 119870132
Start: 4327284
End: 4328948
Strand: Direct
Name: 119870132
Synonym: Mkms_4102
Alternate gene names: NA
Gene position: 4327284-4328948 (Clockwise)
Preceding gene: 119870129
Following gene: 119870140
Centisome position: 75.42
GC content: 73.21
Gene sequence:
>1665_bases ATGCGCGCCGCCCGGATCCGGCTCGGCGAGCTGCTGCTGGCGCTGGATCGCACCATGGTCACGCTGCAGCAGGCGCCGCG GGGTCTCGACCTGCCGGTGGCCTCGGTCGCGCTCGTCGACGCCGACGACGTGCGGCTCGGCATCGCCCCATCGGCGGGTA ACGCCGACCTGTTCTTCCTCCTCGGCGTCCCGTCGGACGACGCCGTGCGCTGGCTGGCCGCGCAACCACGCCCCCCGGTG GCGGTGTTCGTCAAGGACCCGGCGCCCGAACTCGTGCGGCACGCGATAGCGCGCGGCGCGGCCGTCGTCGCGGTCGACCC GCATGCCCGCTGGGAACGGCTGTACCGCCTGGTCAACCAGTTCTTCGACCACCGCGGCGACCACGGCGATCCGCCGCTGC CCGGCGGCACCGACCTGTTCGGTCTCGCGCAGTCCATCGCCGACCGGGCCCGCGGCATGGTCAGCATCGAGGACGCACAG TCGCACGTCCTCGCGTACTCGGCGTCCAGCGAGGAGGCCGACGAGCTGCGCCGGCTGTCGATCCTCGGCCGCGCGGGACC GCCCGAGCACCTGGCCTGGATCGGGCAGTGGGGCATCTTCGACGCGCTGCGAGCCGGTCGCGACGTGGTGCGGGTGGCCG AACGGCCCGAGCTCGGGCTGCGCCCGCGTATGGCGGTCGGCATCCACCTGCGATCGGGGGCCCGTCGCACACCCACGTTC GCCGGCACCATCTGGCTGCAGCAGGGTTCGGCACCGTTCGCCGACGACGCCGAGGAGGTGTTGCGCGGCGGGGCGGTGCT GGCGGCGCGGGTGCTCGGCAGGATGGCGGCGACCCCGTCCACGCACACCCTGCGGGTGCGGGAGTTGCTCGGGCTGTCCG ACACCGACACCGACATCGGCGCCATCGCCCGCGAGCTGGGCGTCGACGCCGACAGCCGCGCCGCGCTGATCGGCTTCGGC ACAGCGGCGCCCACTCCTCCCGCCGATGTCATCGCGCTGAGCGCCACGGCATTTCGCGCCGACGCCCAGGTCGCCTCGGC CGGTGACCGGGTGTACGTGGTGCTCCCCGAGATCGGCGCGCCGTCGGTGACGTCATGGGTGCGCGGCGTCGTGGGTACGC TGCGCCGTGAGGCCGGGTTGACGCTACACGCGGTGATCGCCGCGCCGCTGCCCGGGCTGGCCGACGTCGCGGCCTCGCGA GCCGAGATCGACCGCGTATTCGACAGTGCCGCACGCCATCCCGGCGCCATCGGACAGATCACCTCGCTGGCGGACGCCCG TGCCACGGTGCTGCTGGACGAGATCGTCGCGCATGTCGCCGGCCGTCCCGGGCTCGTCGACCCGCGGGTGCGGACCCTCC GTGAAAAGGATCCGCTGCTGGCCGAGACGCTGCACGCCTACCTCGACGGCTTCGGCGACATCGCGGCCGTCGCAAGTCGG ATGCACGTGCACCCCAACACGATTCGCTACCGGGTCCGGCGCATCGAGACGCTGCTCGGCACCTCGCTCGACGACCCCGA CGACCGGCTGGTGCTCGCCCTGGGTCTTCGCGCCACCGAAAGTGCTCAGCCGCTGAACGCGCCGTCGACCAGCTCGTCGA ACCGCTCCAACGCCTCGTCGCGATCGTCGTCGATACCGCGCAGCGGGCCGGGATCGTCGAGGTAG
Upstream 100 bases:
>100_bases TCGGTGATCGCGTCCATGGCTCAAGAATCCCCGAGACGAGACCTGCGTCACTTAGCCGATCGGCCAAAGAAACACCGCCA GGCCATTACGATCGGACAAT
Downstream 100 bases:
>100_bases CGCCGGGCATACAGCCGGGCGACCAACGCTTTCCGCTCACCGCCGCGTTCCGCGCGTTCCCACGCCGCCTGCTCGGTCAG CAGAGCGCCCGCATACACGT
Product: hypothetical protein
Products: NA
Alternate protein names: CdaR Family Transcriptional Regulator; Transcriptional Regulator CdaR; Transcriptional Regulator; PucR Family Transcriptional Regulator; Regulator Of Polyketide Synthase Expression- Like Protein
Number of amino acids: Translated: 554; Mature: 554
Protein sequence:
>554_residues MRAARIRLGELLLALDRTMVTLQQAPRGLDLPVASVALVDADDVRLGIAPSAGNADLFFLLGVPSDDAVRWLAAQPRPPV AVFVKDPAPELVRHAIARGAAVVAVDPHARWERLYRLVNQFFDHRGDHGDPPLPGGTDLFGLAQSIADRARGMVSIEDAQ SHVLAYSASSEEADELRRLSILGRAGPPEHLAWIGQWGIFDALRAGRDVVRVAERPELGLRPRMAVGIHLRSGARRTPTF AGTIWLQQGSAPFADDAEEVLRGGAVLAARVLGRMAATPSTHTLRVRELLGLSDTDTDIGAIARELGVDADSRAALIGFG TAAPTPPADVIALSATAFRADAQVASAGDRVYVVLPEIGAPSVTSWVRGVVGTLRREAGLTLHAVIAAPLPGLADVAASR AEIDRVFDSAARHPGAIGQITSLADARATVLLDEIVAHVAGRPGLVDPRVRTLREKDPLLAETLHAYLDGFGDIAAVASR MHVHPNTIRYRVRRIETLLGTSLDDPDDRLVLALGLRATESAQPLNAPSTSSSNRSNASSRSSSIPRSGPGSSR
Sequences:
>Translated_554_residues MRAARIRLGELLLALDRTMVTLQQAPRGLDLPVASVALVDADDVRLGIAPSAGNADLFFLLGVPSDDAVRWLAAQPRPPV AVFVKDPAPELVRHAIARGAAVVAVDPHARWERLYRLVNQFFDHRGDHGDPPLPGGTDLFGLAQSIADRARGMVSIEDAQ SHVLAYSASSEEADELRRLSILGRAGPPEHLAWIGQWGIFDALRAGRDVVRVAERPELGLRPRMAVGIHLRSGARRTPTF AGTIWLQQGSAPFADDAEEVLRGGAVLAARVLGRMAATPSTHTLRVRELLGLSDTDTDIGAIARELGVDADSRAALIGFG TAAPTPPADVIALSATAFRADAQVASAGDRVYVVLPEIGAPSVTSWVRGVVGTLRREAGLTLHAVIAAPLPGLADVAASR AEIDRVFDSAARHPGAIGQITSLADARATVLLDEIVAHVAGRPGLVDPRVRTLREKDPLLAETLHAYLDGFGDIAAVASR MHVHPNTIRYRVRRIETLLGTSLDDPDDRLVLALGLRATESAQPLNAPSTSSSNRSNASSRSSSIPRSGPGSSR >Mature_554_residues MRAARIRLGELLLALDRTMVTLQQAPRGLDLPVASVALVDADDVRLGIAPSAGNADLFFLLGVPSDDAVRWLAAQPRPPV AVFVKDPAPELVRHAIARGAAVVAVDPHARWERLYRLVNQFFDHRGDHGDPPLPGGTDLFGLAQSIADRARGMVSIEDAQ SHVLAYSASSEEADELRRLSILGRAGPPEHLAWIGQWGIFDALRAGRDVVRVAERPELGLRPRMAVGIHLRSGARRTPTF AGTIWLQQGSAPFADDAEEVLRGGAVLAARVLGRMAATPSTHTLRVRELLGLSDTDTDIGAIARELGVDADSRAALIGFG TAAPTPPADVIALSATAFRADAQVASAGDRVYVVLPEIGAPSVTSWVRGVVGTLRREAGLTLHAVIAAPLPGLADVAASR AEIDRVFDSAARHPGAIGQITSLADARATVLLDEIVAHVAGRPGLVDPRVRTLREKDPLLAETLHAYLDGFGDIAAVASR MHVHPNTIRYRVRRIETLLGTSLDDPDDRLVLALGLRATESAQPLNAPSTSSSNRSNASSRSSSIPRSGPGSSR
Specific function: Unknown
COG id: COG2508
COG function: function code TQ; Regulator of polyketide synthase expression
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58712; Mature: 58712
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAARIRLGELLLALDRTMVTLQQAPRGLDLPVASVALVDADDVRLGIAPSAGNADLFFL CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEECCCCEEEECCCCCCCCEEEE LGVPSDDAVRWLAAQPRPPVAVFVKDPAPELVRHAIARGAAVVAVDPHARWERLYRLVNQ EECCCCHHHHHEECCCCCCEEEEECCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHH FFDHRGDHGDPPLPGGTDLFGLAQSIADRARGMVSIEDAQSHVLAYSASSEEADELRRLS HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCHHHHHHHHHH ILGRAGPPEHLAWIGQWGIFDALRAGRDVVRVAERPELGLRPRMAVGIHLRSGARRTPTF HHCCCCCHHHHHHHHCHHHHHHHHCCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCE AGTIWLQQGSAPFADDAEEVLRGGAVLAARVLGRMAATPSTHTLRVRELLGLSDTDTDIG EEEEEEECCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHH AIARELGVDADSRAALIGFGTAAPTPPADVIALSATAFRADAQVASAGDRVYVVLPEIGA HHHHHHCCCCCCCEEEEEECCCCCCCCHHEEEEEHHHHHCCCHHHCCCCEEEEEECCCCC PSVTSWVRGVVGTLRREAGLTLHAVIAAPLPGLADVAASRAEIDRVFDSAARHPGAIGQI CHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH TSLADARATVLLDEIVAHVAGRPGLVDPRVRTLREKDPLLAETLHAYLDGFGDIAAVASR HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHH MHVHPNTIRYRVRRIETLLGTSLDDPDDRLVLALGLRATESAQPLNAPSTSSSNRSNASS HCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCH RSSSIPRSGPGSSR HHCCCCCCCCCCCC >Mature Secondary Structure MRAARIRLGELLLALDRTMVTLQQAPRGLDLPVASVALVDADDVRLGIAPSAGNADLFFL CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEECCCCEEEECCCCCCCCEEEE LGVPSDDAVRWLAAQPRPPVAVFVKDPAPELVRHAIARGAAVVAVDPHARWERLYRLVNQ EECCCCHHHHHEECCCCCCEEEEECCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHH FFDHRGDHGDPPLPGGTDLFGLAQSIADRARGMVSIEDAQSHVLAYSASSEEADELRRLS HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCHHHHHHHHHH ILGRAGPPEHLAWIGQWGIFDALRAGRDVVRVAERPELGLRPRMAVGIHLRSGARRTPTF HHCCCCCHHHHHHHHCHHHHHHHHCCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCE AGTIWLQQGSAPFADDAEEVLRGGAVLAARVLGRMAATPSTHTLRVRELLGLSDTDTDIG EEEEEEECCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHH AIARELGVDADSRAALIGFGTAAPTPPADVIALSATAFRADAQVASAGDRVYVVLPEIGA HHHHHHCCCCCCCEEEEEECCCCCCCCHHEEEEEHHHHHCCCHHHCCCCEEEEEECCCCC PSVTSWVRGVVGTLRREAGLTLHAVIAAPLPGLADVAASRAEIDRVFDSAARHPGAIGQI CHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH TSLADARATVLLDEIVAHVAGRPGLVDPRVRTLREKDPLLAETLHAYLDGFGDIAAVASR HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHH MHVHPNTIRYRVRRIETLLGTSLDDPDDRLVLALGLRATESAQPLNAPSTSSSNRSNASS HCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCH RSSSIPRSGPGSSR HHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA