| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119870117
Identifier: 119870117
GI number: 119870117
Start: 4313664
End: 4314611
Strand: Direct
Name: 119870117
Synonym: Mkms_4087
Alternate gene names: NA
Gene position: 4313664-4314611 (Clockwise)
Preceding gene: 119870114
Following gene: 119870122
Centisome position: 75.19
GC content: 70.04
Gene sequence:
>948_bases GTGACTTCTGCTGCAGGAATCGGCCTGGCCACCATCGCCGCCGACGGAACCGTCCTCGACACCTGGTACCCGGCGCCCGA ACTGGGCGCCGACCTCGGCGAGTCCGGGACCGTCCGCCTGTCGGTCGCCGAGGTTCCGGCCGAACTCGGTGAGCTCACCG GCCGCGACGAGGACCGCGACGTCGACATCGTCGTCGTGCGCACGGTCATCTCCTCGCTGGAGGACAAGCCGGCCGACGGC TATGACGCCTACCTGCGGTTGCACCTGCTGTCCCACCGGCTGATCCAGCCGCGCGGCGCCAACCTGGACGGCGTCTTCGG GGTGCTGGCCAACGTGGTGTGGACCAACTTCGGGCCGTGTGCGGTCGAGGGCTTCGAGACCGTGCGCGCCCGGTTGCGGC GCCGCGGGACCGTGACCGTGTTCGGGATCGACAAGTTCCCGCGGATGGTCGACTACGTGACGCCGACCGGTGTGCGGATC GCCGACGCCGACCGGGTGCGCCTGGGTGCGCACCTCGCGCCGGGGACGACGGTGATGCACGAGGGTTTCGTGAACTACAA CGCGGGCACGTTGGGCTCGTCGATGGTGGAGGGCCGGATCTCGGCGGGCGTGGTGGTCGACGACGGATCCGACGTCGGTG GCGGCGCGTCGATCATGGGCACCCTGTCCGGGGGCGGCAAAGAGGTCATCTCCGTCGGCAAGCGCTGCCTGCTCGGCGCG AACGCCGGGCTGGGCATCTCGCTGGGTGACGACTGCGTGGTGGAGGCGGGGCTGTACGTCACCGCGGGCACCAAGGTGCA GACGTCAGACGGGCAGACGGTGAAGGCGCGTGACCTCTCCGGTGCGAACAACCTGCTGTTCCGCCGTAACTCCGTCTCCG GTGCCGTCGAAGTGGTCCGGCGCGACGGCACCGGTGTCACGCTCAACGAGGCGCTGCACGCGAACTGA
Upstream 100 bases:
>100_bases GGCCGTCAGCTCGACCGGGTCACCACGGAGATCCAGCGATGAGCCGCTTGCGCGAAGAGCCGATGATGGGGCCATGAGGT CAACGGTAATCTCTAGCTCC
Downstream 100 bases:
>100_bases GCGGCAACTGACCGGCGTTGCCGAAGTCGTCGTCGATCAGCACGACATCGTGGCCGGCGCGGTCGAGGTACGACGCCGCG ATGGACGACCGGTAACCCGA
Product: putative transferase
Products: CoA; (R)-2-(succinylamino)-6-oxoheptanedioate
Alternate protein names: Transferase; Tetrahydrodipicolinate Succinylase; Tetrahydropicolinate Succinylase; Tetrahydrodipicolinate N- Succinyltransferase; Succinyltransferase; Transferase Hexapeptide Repeat Containing Protein; Succinyl-Transferase; Lysine Biosynthesis-Like Protein; Transferase Tetrahydrodipicolinate N-Succinyltransferase; Tranferase; Tetrahydrodipicolinate N-Succinyltransferase-Like Protein
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MTSAAGIGLATIAADGTVLDTWYPAPELGADLGESGTVRLSVAEVPAELGELTGRDEDRDVDIVVVRTVISSLEDKPADG YDAYLRLHLLSHRLIQPRGANLDGVFGVLANVVWTNFGPCAVEGFETVRARLRRRGTVTVFGIDKFPRMVDYVTPTGVRI ADADRVRLGAHLAPGTTVMHEGFVNYNAGTLGSSMVEGRISAGVVVDDGSDVGGGASIMGTLSGGGKEVISVGKRCLLGA NAGLGISLGDDCVVEAGLYVTAGTKVQTSDGQTVKARDLSGANNLLFRRNSVSGAVEVVRRDGTGVTLNEALHAN
Sequences:
>Translated_315_residues MTSAAGIGLATIAADGTVLDTWYPAPELGADLGESGTVRLSVAEVPAELGELTGRDEDRDVDIVVVRTVISSLEDKPADG YDAYLRLHLLSHRLIQPRGANLDGVFGVLANVVWTNFGPCAVEGFETVRARLRRRGTVTVFGIDKFPRMVDYVTPTGVRI ADADRVRLGAHLAPGTTVMHEGFVNYNAGTLGSSMVEGRISAGVVVDDGSDVGGGASIMGTLSGGGKEVISVGKRCLLGA NAGLGISLGDDCVVEAGLYVTAGTKVQTSDGQTVKARDLSGANNLLFRRNSVSGAVEVVRRDGTGVTLNEALHAN >Mature_314_residues TSAAGIGLATIAADGTVLDTWYPAPELGADLGESGTVRLSVAEVPAELGELTGRDEDRDVDIVVVRTVISSLEDKPADGY DAYLRLHLLSHRLIQPRGANLDGVFGVLANVVWTNFGPCAVEGFETVRARLRRRGTVTVFGIDKFPRMVDYVTPTGVRIA DADRVRLGAHLAPGTTVMHEGFVNYNAGTLGSSMVEGRISAGVVVDDGSDVGGGASIMGTLSGGGKEVISVGKRCLLGAN AGLGISLGDDCVVEAGLYVTAGTKVQTSDGQTVKARDLSGANNLLFRRNSVSGAVEVVRRDGTGVTLNEALHAN
Specific function: Unknown
COG id: COG2171
COG function: function code E; Tetrahydrodipicolinate N-succinyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.117
Molecular weight: Translated: 32721; Mature: 32590
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAAGIGLATIAADGTVLDTWYPAPELGADLGESGTVRLSVAEVPAELGELTGRDEDRD CCCCCCCCEEEEECCCEEEECCCCCHHHCCCCCCCCEEEEEHHHCCHHHHHHCCCCCCCC VDIVVVRTVISSLEDKPADGYDAYLRLHLLSHRLIQPRGANLDGVFGVLANVVWTNFGPC EEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCH AVEGFETVRARLRRRGTVTVFGIDKFPRMVDYVTPTGVRIADADRVRLGAHLAPGTTVMH HHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCEEEECCCCEEECCEECCCCEEEE EGFVNYNAGTLGSSMVEGRISAGVVVDDGSDVGGGASIMGTLSGGGKEVISVGKRCLLGA CCCEECCCCCCCCHHHCCCCCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHCCCEEEEC NAGLGISLGDDCVVEAGLYVTAGTKVQTSDGQTVKARDLSGANNLLFRRNSVSGAVEVVR CCCCEEECCCCCEEECCEEEEECCEEECCCCCEEEEECCCCCCCEEEEECCCCCEEEEEE RDGTGVTLNEALHAN ECCCCEEECCCCCCC >Mature Secondary Structure TSAAGIGLATIAADGTVLDTWYPAPELGADLGESGTVRLSVAEVPAELGELTGRDEDRD CCCCCCCEEEEECCCEEEECCCCCHHHCCCCCCCCEEEEEHHHCCHHHHHHCCCCCCCC VDIVVVRTVISSLEDKPADGYDAYLRLHLLSHRLIQPRGANLDGVFGVLANVVWTNFGPC EEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCH AVEGFETVRARLRRRGTVTVFGIDKFPRMVDYVTPTGVRIADADRVRLGAHLAPGTTVMH HHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCEEEECCCCEEECCEECCCCEEEE EGFVNYNAGTLGSSMVEGRISAGVVVDDGSDVGGGASIMGTLSGGGKEVISVGKRCLLGA CCCEECCCCCCCCHHHCCCCCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHCCCEEEEC NAGLGISLGDDCVVEAGLYVTAGTKVQTSDGQTVKARDLSGANNLLFRRNSVSGAVEVVR CCCCEEECCCCCEEECCEEEEECCEEECCCCCEEEEECCCCCCCEEEEECCCCCEEEEEE RDGTGVTLNEALHAN ECCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: succinyl-CoA; (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate; H2O
Specific reaction: succinyl-CoA + (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate + H2O = CoA + (R)-2-(succinylamino)-6-oxoheptanedioate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA