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The map label for this gene is uidR [C]

Identifier: 119870067

GI number: 119870067

Start: 4256533

End: 4257114

Strand: Direct

Name: uidR [C]

Synonym: Mkms_4037

Alternate gene names: 119870067

Gene position: 4256533-4257114 (Clockwise)

Preceding gene: 119870066

Following gene: 119870072

Centisome position: 74.19

GC content: 69.76

Gene sequence:

>582_bases
ATGCTTGCCGACCGTATTCTCGACGCGGCCGAACGGCTGTTCACCGAACGCGACGCCGCGAGCGTGGGCATGAAGGACGT
CGCCGAGGCGGCCGGGTGTTCCCGCGCGACGCTATACCGCCACTTCGACAGCCGCGACACCCTGCACACCGCCTACGTGC
ACCGCGAGGCGCAACGGCTCTACCGCACGCTCACCGAACACCTGGACGGAGTGTCCGACCCGGCCGAACGGCTCATCGAG
GGCACGCTGCTCACCCTGCGCAGTGTCCGCGAAAAGCCCGCGCTCGCATCGTGGTTCGCGCCGACCGCGCGGCCGATCGG
CGGTGAGTGGGCCGAACGGTCCGAGGTCGTCAGGGCGATGGTCGAGGCGTTCGTGCGGTCGCTGGGCGACTCCGGCGACG
TCGAACGACGGGCCCGCTGGCTGGTCCGGGTGCTCACGTCGCTGCTGCTGTTCCCCGGCGGCGACGAGGGCGAGGAACGC
GCGATGCTCTCAGAGTTCCTGGTACCGGCCATGATCGGAGTCGCAGCCGGCGGGCTGATCACTGCCGCGACATCGCGATG
TTCAGCTTGTCCTCCGCGGTGA

Upstream 100 bases:

>100_bases
GCTCGCCCGCTGCCCTGACTTCACCGTCGACGAGGCCGGAATCGTCTGGGCCGGCGGCAGTTACGTGCGGCGTCCGCTGT
CGGTACCGTTCGCGCTGTAG

Downstream 100 bases:

>100_bases
TCAGGTGGTCGTGGTCGGCGGCGCCGATATCGATCTTCACCCAGTCGATTCGGCCGGTGAAAGCGTTGTCGTGCGGCCCG
TAGTCGGGTGACGTCGGCGA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MLADRILDAAERLFTERDAASVGMKDVAEAAGCSRATLYRHFDSRDTLHTAYVHREAQRLYRTLTEHLDGVSDPAERLIE
GTLLTLRSVREKPALASWFAPTARPIGGEWAERSEVVRAMVEAFVRSLGDSGDVERRARWLVRVLTSLLLFPGGDEGEER
AMLSEFLVPAMIGVAAGGLITAATSRCSACPPR

Sequences:

>Translated_193_residues
MLADRILDAAERLFTERDAASVGMKDVAEAAGCSRATLYRHFDSRDTLHTAYVHREAQRLYRTLTEHLDGVSDPAERLIE
GTLLTLRSVREKPALASWFAPTARPIGGEWAERSEVVRAMVEAFVRSLGDSGDVERRARWLVRVLTSLLLFPGGDEGEER
AMLSEFLVPAMIGVAAGGLITAATSRCSACPPR
>Mature_193_residues
MLADRILDAAERLFTERDAASVGMKDVAEAAGCSRATLYRHFDSRDTLHTAYVHREAQRLYRTLTEHLDGVSDPAERLIE
GTLLTLRSVREKPALASWFAPTARPIGGEWAERSEVVRAMVEAFVRSLGDSGDVERRARWLVRVLTSLLLFPGGDEGEER
AMLSEFLVPAMIGVAAGGLITAATSRCSACPPR

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 21184; Mature: 21184

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLADRILDAAERLFTERDAASVGMKDVAEAAGCSRATLYRHFDSRDTLHTAYVHREAQRL
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
YRTLTEHLDGVSDPAERLIEGTLLTLRSVREKPALASWFAPTARPIGGEWAERSEVVRAM
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHH
VEAFVRSLGDSGDVERRARWLVRVLTSLLLFPGGDEGEERAMLSEFLVPAMIGVAAGGLI
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TAATSRCSACPPR
HHHHHHCCCCCCC
>Mature Secondary Structure
MLADRILDAAERLFTERDAASVGMKDVAEAAGCSRATLYRHFDSRDTLHTAYVHREAQRL
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
YRTLTEHLDGVSDPAERLIEGTLLTLRSVREKPALASWFAPTARPIGGEWAERSEVVRAM
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHH
VEAFVRSLGDSGDVERRARWLVRVLTSLLLFPGGDEGEERAMLSEFLVPAMIGVAAGGLI
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TAATSRCSACPPR
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]