| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119870062
Identifier: 119870062
GI number: 119870062
Start: 4251456
End: 4252712
Strand: Direct
Name: 119870062
Synonym: Mkms_4032
Alternate gene names: NA
Gene position: 4251456-4252712 (Clockwise)
Preceding gene: 119870059
Following gene: 119870064
Centisome position: 74.1
GC content: 70.88
Gene sequence:
>1257_bases ATGATCGCCAGCAAGCGCGTCCCGCTGTACCTCATCTACTTCTCGGCCTTGACCGCCGGAGCGGGTAACGGCATCTCGCT GGTCGCCTTCCCCTGGCTGGTGTTGCAGCGCAACGGCTCAGCGGTCGACGCGTCGATCGTCGCGATGGCCGGAACGCTGC CACTGCTGGTCGCCACGCTGATCGCCGGCGCCGCGGTCGACTACCTGGGCCGGCGCCGGGTGTCGATGATCGCTGATGGT TTGTCTGCCCTGTCCGTCGCGGCGGTGCCCGTGCTGGCGTGGACGTTCGGCGTGCAGGCGGTCAATGTGGCGGTGCTGGC CGGACTCGCGGCCCTGGGTGCGTTCTTCGATCCCGCCGGGATGACCGCCCGCGAGACGATGCTGCCCGAGGCCGCGCACC GGGCCGGGTGGACGCTCGACCACGCCAACAGCGTGTACGAGGCCGTGTTCAACCTGGCCTACATCGTCGGGCCGGGCATC GGTGGTCTGCTGATCGCGACGATGGGCGGCGTCAACACCATGTGGGTCACGGCCGCGGCGTTCGTCCTGTCGATCGGCGC CATCGCCGCGCTGCAGCTCGAGGGTGCGGGACGACCCGACCGCGACCAGCTGCCCGAGCGGGTGTGGTCGGGCATCGTGG AGGGTCTCGGATTCGTCTGGCGCACACCGGTGTTGCGCACCCTGGCGGTGGTGGACCTGGTCGCCACCGGGCTGTACATG CCGATGGAGAGCGTGCTGTTCCCGAAGTACTTCACCGACCGCGACGAACCCGCGCAGCTGGGCTGGGTCCTGATGGCGCT GTCGATCGGGGGGCTGGTGGGCGCCCTCGGCTATGCCGCGCTGTCGCGATACGTCAACCGCCGCACGGTGATGCTGGCCG CCGTGCTCACCCTCGGCGTCGCGATGACCGTCATCGCGTTCCTTCCGCCGCTGCCGGTGATCCTGGTCCTCTCGGCGCTC GTCGGACTGGTCTACGGGCCGATCGCGCCGATCTACAACTACGTCATGCAGACGCGCGCGCCGGCCCACCTGCGCGGCCG CGTGGTCGGGGTGATGGGGTCGCTGGCGTATGCAGCGGGCCCGCTCGGCCTGGTGGTGGCGGGTCCACTGGCCGACGGCG CCGGCCTGTCCGTGACGTTCCTCGCGCTCGCACTGCCGATGCTCGCCCTCGGTGTGGCGGCCGTCTTCCTGCCCGCCCTG CGCGAACTCGACCGGGAACCGGCCCGACCCCTCAGAGGCGAACCCGGGGCGGGGTGA
Upstream 100 bases:
>100_bases GCCCGGCGGCACGGGTGAAGAGAAGGGGACGCCGGTGCGCGGGTGAGGTGATTGCACGCCTCCACTGTGCCGCCCGCTGC TACATTCGGCCGCGATACCC
Downstream 100 bases:
>100_bases ACACCTCGGCGAGTTGTCGAACCGCTTCGGGGGCGCCGGCGACGTGCAACCTGCCCGCCGCGACCAGTTCGTCGACGCGG GCGGGGTCGGTGGCGGCGGC
Product: H+ antiporter protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MIASKRVPLYLIYFSALTAGAGNGISLVAFPWLVLQRNGSAVDASIVAMAGTLPLLVATLIAGAAVDYLGRRRVSMIADG LSALSVAAVPVLAWTFGVQAVNVAVLAGLAALGAFFDPAGMTARETMLPEAAHRAGWTLDHANSVYEAVFNLAYIVGPGI GGLLIATMGGVNTMWVTAAAFVLSIGAIAALQLEGAGRPDRDQLPERVWSGIVEGLGFVWRTPVLRTLAVVDLVATGLYM PMESVLFPKYFTDRDEPAQLGWVLMALSIGGLVGALGYAALSRYVNRRTVMLAAVLTLGVAMTVIAFLPPLPVILVLSAL VGLVYGPIAPIYNYVMQTRAPAHLRGRVVGVMGSLAYAAGPLGLVVAGPLADGAGLSVTFLALALPMLALGVAAVFLPAL RELDREPARPLRGEPGAG
Sequences:
>Translated_418_residues MIASKRVPLYLIYFSALTAGAGNGISLVAFPWLVLQRNGSAVDASIVAMAGTLPLLVATLIAGAAVDYLGRRRVSMIADG LSALSVAAVPVLAWTFGVQAVNVAVLAGLAALGAFFDPAGMTARETMLPEAAHRAGWTLDHANSVYEAVFNLAYIVGPGI GGLLIATMGGVNTMWVTAAAFVLSIGAIAALQLEGAGRPDRDQLPERVWSGIVEGLGFVWRTPVLRTLAVVDLVATGLYM PMESVLFPKYFTDRDEPAQLGWVLMALSIGGLVGALGYAALSRYVNRRTVMLAAVLTLGVAMTVIAFLPPLPVILVLSAL VGLVYGPIAPIYNYVMQTRAPAHLRGRVVGVMGSLAYAAGPLGLVVAGPLADGAGLSVTFLALALPMLALGVAAVFLPAL RELDREPARPLRGEPGAG >Mature_418_residues MIASKRVPLYLIYFSALTAGAGNGISLVAFPWLVLQRNGSAVDASIVAMAGTLPLLVATLIAGAAVDYLGRRRVSMIADG LSALSVAAVPVLAWTFGVQAVNVAVLAGLAALGAFFDPAGMTARETMLPEAAHRAGWTLDHANSVYEAVFNLAYIVGPGI GGLLIATMGGVNTMWVTAAAFVLSIGAIAALQLEGAGRPDRDQLPERVWSGIVEGLGFVWRTPVLRTLAVVDLVATGLYM PMESVLFPKYFTDRDEPAQLGWVLMALSIGGLVGALGYAALSRYVNRRTVMLAAVLTLGVAMTVIAFLPPLPVILVLSAL VGLVYGPIAPIYNYVMQTRAPAHLRGRVVGVMGSLAYAAGPLGLVVAGPLADGAGLSVTFLALALPMLALGVAAVFLPAL RELDREPARPLRGEPGAG
Specific function: Could be involved in tetracycline efflux [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43320; Mature: 43320
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIASKRVPLYLIYFSALTAGAGNGISLVAFPWLVLQRNGSAVDASIVAMAGTLPLLVATL CCCCCCCCEEEHHHHHHHCCCCCCCCHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHH IAGAAVDYLGRRRVSMIADGLSALSVAAVPVLAWTFGVQAVNVAVLAGLAALGAFFDPAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC MTARETMLPEAAHRAGWTLDHANSVYEAVFNLAYIVGPGIGGLLIATMGGVNTMWVTAAA CCHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHH FVLSIGAIAALQLEGAGRPDRDQLPERVWSGIVEGLGFVWRTPVLRTLAVVDLVATGLYM HHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PMESVLFPKYFTDRDEPAQLGWVLMALSIGGLVGALGYAALSRYVNRRTVMLAAVLTLGV HHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMTVIAFLPPLPVILVLSALVGLVYGPIAPIYNYVMQTRAPAHLRGRVVGVMGSLAYAAG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC PLGLVVAGPLADGAGLSVTFLALALPMLALGVAAVFLPALRELDREPARPLRGEPGAG CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MIASKRVPLYLIYFSALTAGAGNGISLVAFPWLVLQRNGSAVDASIVAMAGTLPLLVATL CCCCCCCCEEEHHHHHHHCCCCCCCCHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHH IAGAAVDYLGRRRVSMIADGLSALSVAAVPVLAWTFGVQAVNVAVLAGLAALGAFFDPAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC MTARETMLPEAAHRAGWTLDHANSVYEAVFNLAYIVGPGIGGLLIATMGGVNTMWVTAAA CCHHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHH FVLSIGAIAALQLEGAGRPDRDQLPERVWSGIVEGLGFVWRTPVLRTLAVVDLVATGLYM HHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PMESVLFPKYFTDRDEPAQLGWVLMALSIGGLVGALGYAALSRYVNRRTVMLAAVLTLGV HHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMTVIAFLPPLPVILVLSALVGLVYGPIAPIYNYVMQTRAPAHLRGRVVGVMGSLAYAAG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC PLGLVVAGPLADGAGLSVTFLALALPMLALGVAAVFLPALRELDREPARPLRGEPGAG CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]