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The map label for this gene is ycfF [C]

Identifier: 119870058

GI number: 119870058

Start: 4248566

End: 4248997

Strand: Direct

Name: ycfF [C]

Synonym: Mkms_4028

Alternate gene names: 119870058

Gene position: 4248566-4248997 (Clockwise)

Preceding gene: 119870057

Following gene: 119870059

Centisome position: 74.05

GC content: 68.29

Gene sequence:

>432_bases
ATGTCCTGTGTGTTCTGCGACATCGTCGCCGGCGACGCCCCCGCCATCCGCGTCTACGAGGATGCGGACTTCCTGGGCAT
CCTCGACATCCGCCCGTTCGCCCGCGGCCACACGCTGGTGATCCCCAAACGCCACACCGTGAACCTCACCGACACCCCGG
CCGACACGGTCGCGGGGATGGCCCGCATCGGACAGCGCATCGCGAAGGCGGCACGTCGCTCGGGGTTGCACGCCGACGGC
AACAACGTCGTCATCAACGACGGGAAGGCGGCCTTTCAGACCGTGTTCCACATCCACCTGCATGTGCTCCCCCGCCGCAG
CGGCGACAAGCTCTCGTTCGCCAAGAACATGGTGCTGCGGCGCGATCCGGACCGGGAGGAGTCGGGCCGGCTGCTGCGCG
AGGCGATCGCCGAACTCGACAACGCGCCGTAG

Upstream 100 bases:

>100_bases
GTGATGACCCGGGTCGAGGACGTCTCGGCCGCAGAGCGCGATCGCAGGTTGGCCGACTGGGCCCGCGAGAACGTCTGACC
CGTCCGGCTACCGTGGCGGG

Downstream 100 bases:

>100_bases
ACGTCACCACGCGGGTCCGTGCAGGCCGACACCCTATGGGCGCGCAGGCTGACACACTGGGGCAATGAGCCACCTCACCT
CGCTCGAACAGGTCGGCGCG

Product: histidine triad (HIT) protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MSCVFCDIVAGDAPAIRVYEDADFLGILDIRPFARGHTLVIPKRHTVNLTDTPADTVAGMARIGQRIAKAARRSGLHADG
NNVVINDGKAAFQTVFHIHLHVLPRRSGDKLSFAKNMVLRRDPDREESGRLLREAIAELDNAP

Sequences:

>Translated_143_residues
MSCVFCDIVAGDAPAIRVYEDADFLGILDIRPFARGHTLVIPKRHTVNLTDTPADTVAGMARIGQRIAKAARRSGLHADG
NNVVINDGKAAFQTVFHIHLHVLPRRSGDKLSFAKNMVLRRDPDREESGRLLREAIAELDNAP
>Mature_142_residues
SCVFCDIVAGDAPAIRVYEDADFLGILDIRPFARGHTLVIPKRHTVNLTDTPADTVAGMARIGQRIAKAARRSGLHADGN
NVVINDGKAAFQTVFHIHLHVLPRRSGDKLSFAKNMVLRRDPDREESGRLLREAIAELDNAP

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17506713, Length=105, Percent_Identity=37.1428571428571, Blast_Score=66, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6320078, Length=141, Percent_Identity=34.0425531914894, Blast_Score=90, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24581222, Length=107, Percent_Identity=36.4485981308411, Blast_Score=63, Evalue=7e-11,
Organism=Drosophila melanogaster, GI28574010, Length=107, Percent_Identity=36.4485981308411, Blast_Score=63, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 15705; Mature: 15574

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCVFCDIVAGDAPAIRVYEDADFLGILDIRPFARGHTLVIPKRHTVNLTDTPADTVAGM
CCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCEEEECCCCEEECCCCCHHHHHHH
ARIGQRIAKAARRSGLHADGNNVVINDGKAAFQTVFHIHLHVLPRRSGDKLSFAKNMVLR
HHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHC
RDPDREESGRLLREAIAELDNAP
CCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SCVFCDIVAGDAPAIRVYEDADFLGILDIRPFARGHTLVIPKRHTVNLTDTPADTVAGM
CEEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCEEEECCCCEEECCCCCHHHHHHH
ARIGQRIAKAARRSGLHADGNNVVINDGKAAFQTVFHIHLHVLPRRSGDKLSFAKNMVLR
HHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHC
RDPDREESGRLLREAIAELDNAP
CCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]