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The map label for this gene is 119870054

Identifier: 119870054

GI number: 119870054

Start: 4246173

End: 4246670

Strand: Direct

Name: 119870054

Synonym: Mkms_4024

Alternate gene names: NA

Gene position: 4246173-4246670 (Clockwise)

Preceding gene: 119870052

Following gene: 119870055

Centisome position: 74.01

GC content: 68.88

Gene sequence:

>498_bases
ATGTCCACACCGGACCTGGTGCAGGGTTTCGCACCCATCGTCGGCGGTGCACCCCGGACGCTGGTACTCGGCAATGCGCC
GAGCGTGCTGGCCCTGGCGAAGCACCAGTACTACGGCAACCCGCGAAACGCCTTCTGGCGGATCGCCGGTGCACTCTACG
GATTCGACGCCGATGACCCGTACGCCGTACGCACCGCCGCGTTGATCGCCCACGGCGTGGCGGTCTGGGACGTGCTGCGC
GAGTGTCGCCGCACCGGCAGCCTCGACTCGGCGGTGCAGCCGGACAGCATGGTGGCCAACGACTTCGGCTCGTTCTTCGG
TGAGCACCCGACCATTCGGCGGGTGCTGTTCAACGGCGCCGCCGCCGAGCGGAACTTCCGGCGGTTGGTTCCGGGGGCCT
TCGAGGTGGAGTTCTCGCGGCTGCCGTCGACCAGTCCCGCGCAGACCATGCGCTACGAGCTGAAGCTGGCCGCGTGGCGC
GAGGCGTTGGCGGATTAG

Upstream 100 bases:

>100_bases
CCGGTCAACCCGACGAGGAGCCCCTCGATGTCTTCGGTGTCGCGCGCTTCGGTCACGCCACAACGTATACCCAGCCGCGC
GTCGGGCATCATGGTCGGCG

Downstream 100 bases:

>100_bases
TTGTGATGTCCAGGCCGTCGCCGAGACTGCTGCCAGATCAAGGAAATCGGCGAAACGGTGATCTCCGCGCAGTTTCGGCG
CAGGTGGGGAACGTCCGACC

Product: hypothetical protein

Products: NA

Alternate protein names: Uracil-DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily; T/U Mismatch-Specific DNA Glycosylase; GT/U Mismatch-Specific DNA Glycosylase-Like Protein; Mug GT/U Mismatch-Specific DNA Glycosylase; G/U Mismatch-Specific DNA Glycosylase; DNA Glycosylase; G/U Mismatch-Specific Uracil-DNA Glycosylase; Uracil DNA Glycosylase Superfamily; G-T/U Mismatch-Specific DNA Glycosylase-Like; YjeF-Like Protein; GT/U Mismatch-Specific Uracil/Thymine DNA-Glycosylase

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MSTPDLVQGFAPIVGGAPRTLVLGNAPSVLALAKHQYYGNPRNAFWRIAGALYGFDADDPYAVRTAALIAHGVAVWDVLR
ECRRTGSLDSAVQPDSMVANDFGSFFGEHPTIRRVLFNGAAAERNFRRLVPGAFEVEFSRLPSTSPAQTMRYELKLAAWR
EALAD

Sequences:

>Translated_165_residues
MSTPDLVQGFAPIVGGAPRTLVLGNAPSVLALAKHQYYGNPRNAFWRIAGALYGFDADDPYAVRTAALIAHGVAVWDVLR
ECRRTGSLDSAVQPDSMVANDFGSFFGEHPTIRRVLFNGAAAERNFRRLVPGAFEVEFSRLPSTSPAQTMRYELKLAAWR
EALAD
>Mature_164_residues
STPDLVQGFAPIVGGAPRTLVLGNAPSVLALAKHQYYGNPRNAFWRIAGALYGFDADDPYAVRTAALIAHGVAVWDVLRE
CRRTGSLDSAVQPDSMVANDFGSFFGEHPTIRRVLFNGAAAERNFRRLVPGAFEVEFSRLPSTSPAQTMRYELKLAAWRE
ALAD

Specific function: Unknown

COG id: COG3663

COG function: function code L; G:T/U mismatch-specific DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18026; Mature: 17894

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPDLVQGFAPIVGGAPRTLVLGNAPSVLALAKHQYYGNPRNAFWRIAGALYGFDADDP
CCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
YAVRTAALIAHGVAVWDVLRECRRTGSLDSAVQPDSMVANDFGSFFGEHPTIRRVLFNGA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCH
AAERNFRRLVPGAFEVEFSRLPSTSPAQTMRYELKLAAWREALAD
HHHHHHHHHCCCCCEEEHHHCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STPDLVQGFAPIVGGAPRTLVLGNAPSVLALAKHQYYGNPRNAFWRIAGALYGFDADDP
CCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
YAVRTAALIAHGVAVWDVLRECRRTGSLDSAVQPDSMVANDFGSFFGEHPTIRRVLFNGA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCH
AAERNFRRLVPGAFEVEFSRLPSTSPAQTMRYELKLAAWREALAD
HHHHHHHHHCCCCCEEEHHHCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA