| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119870024
Identifier: 119870024
GI number: 119870024
Start: 4208652
End: 4210178
Strand: Direct
Name: 119870024
Synonym: Mkms_3994
Alternate gene names: NA
Gene position: 4208652-4210178 (Clockwise)
Preceding gene: 119870016
Following gene: 119870031
Centisome position: 73.36
GC content: 69.29
Gene sequence:
>1527_bases ATGTTCGATACGGTGTTTGCGGGGCTGGAGGAGTCCGCGCTTCTTGCTGCGATCGAGCAGGCCGCGCGTGAGGAGGCGCA GGCCGGGGCGCGGAGGTTGGCCGCGATCGCGCAGCTGGTGCATTTGACGGTGACCTGTGACGAGGAGTGCGACGGGTGGG TGTATGACTCGTGGGCTGCGGCCGCCTCCGAGGTCGGGGCGGTGTTGAACATCGGCCACAAGCGGGCGTCGGGGCAGATG CGGATCGCGGTCGCGCTGCGTGACCGGTTGCCCAAGGTCGCGGCGCTGTACCTGCAGGGGCGGTTGAGTGCCCGGTTGAT CTCCGAGATCAGCTGGCGCACCCGCCTGGTCGACGGCGAGCAGGTGCTGGGGCTGGTGGATGCGGCGCTGGCTGAGGCGG CGTTGCGGTGGGGGCCGTTGTCGGAGGCGCGGTTGGCCCGGGCCCTCGATGCGGTGATCCACCGGTATGACCGGGATGCG GTGATCCGAGCCAAAGACACCGTCAAGACCCGCGACTTCCATATCGGATCCGGTGATGATCCCGACGAGTTGGTGTTGGT CTGGGGTCAGCTGCTGGGCTGTGACGCCGCGGCGTTGTCGGCGCGGATCGCCGCGTTGCTCAAAGGGATCTGCGACAACG ATCCGCGCAGCGTGGGTGAGCGGCGCTCGTGTGCGGTGGGCGCCATCGTCCAGGGCCACGACCATCTGCCGTGCCGCTGC GGATCACCGGCATGCGCGGCAGCAGCGCCGGAGAAGTCGAATGTGGTGATCTCGGTGATCGCCGATCCGGCCGCGGTCGA GGCGGCCCAGATGCTGATCGCCGCCGAGGACGAACACCACGCCGAGCAGGACGAGCCCGAACCCGTCCCGTGCCAAAAGG ATTCGGGGGTGGCGTTGCTGCCCGGGGTGAAGCTCCTGCCGATCGTGGCGTTGGCCGAGGCGATCCGCGGTGGAGCGGCG ATCAAACCGTTGTGGCTGCCCGGCCCGGATCCCGAACCGCACTACCGGCCCTCGGCCAAGCTGGCCGCGTTCGTGCGCGC CCGTGACCTGTTCTGCCGATTCCCCGGCTGCGACGTGCCCGCCGAGCGCTGCGATATCGACCATGTCGTGCCGTGGCCGT ATGGACCCACCCACGCGTCGAACCTGAACTGCAAATGCCGCACCCACCACCTGGGAAAGACGTTCTGGGACGGCTGGCGT GACGAACAATCACCTGACGGCACGGTGACCTGGACAACGCCGACCGGCAAGCGCCACACCACGGTGCCGGGCAGCCGGCT GTTCTTCCCCGAATGGGACAACACCACAGCGCCGTTACCGCCGCTGGAACAACCTCCCCCGGACCCCGGGCGCACCGCCA AGATGCCCAAGCGACGACGCACCCGCGCCGCCGACAACGCCGCCCGCGTCAAAGCCGAACGCGAACACAACGCCGCCGCA CGAGCGATGGCCGACCACGCAGCCAACGCGGACCCACCGCCACCCGCGCCGCACCCCGACTACGGCGACGACCCGCCACC GTTCTGA
Upstream 100 bases:
>100_bases ACCGAAAAATTACCGGCGAGACGATGGCGGTGTCAAGGCGGCCCGAGCGCCCGCCCCAGCAACGCGGAGATTGTCACCCC GTCGCGGTAGAATCGAACAC
Downstream 100 bases:
>100_bases CAGAACTCCGATGACATCGTCGGGGCGCCGCGGTCTAGACCGTCACCTCGGTCAGCCGTCCCGTCGCGACGTCGAAGACA AAGCCGCGCAACGACTCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues MFDTVFAGLEESALLAAIEQAAREEAQAGARRLAAIAQLVHLTVTCDEECDGWVYDSWAAAASEVGAVLNIGHKRASGQM RIAVALRDRLPKVAALYLQGRLSARLISEISWRTRLVDGEQVLGLVDAALAEAALRWGPLSEARLARALDAVIHRYDRDA VIRAKDTVKTRDFHIGSGDDPDELVLVWGQLLGCDAAALSARIAALLKGICDNDPRSVGERRSCAVGAIVQGHDHLPCRC GSPACAAAAPEKSNVVISVIADPAAVEAAQMLIAAEDEHHAEQDEPEPVPCQKDSGVALLPGVKLLPIVALAEAIRGGAA IKPLWLPGPDPEPHYRPSAKLAAFVRARDLFCRFPGCDVPAERCDIDHVVPWPYGPTHASNLNCKCRTHHLGKTFWDGWR DEQSPDGTVTWTTPTGKRHTTVPGSRLFFPEWDNTTAPLPPLEQPPPDPGRTAKMPKRRRTRAADNAARVKAEREHNAAA RAMADHAANADPPPPAPHPDYGDDPPPF
Sequences:
>Translated_508_residues MFDTVFAGLEESALLAAIEQAAREEAQAGARRLAAIAQLVHLTVTCDEECDGWVYDSWAAAASEVGAVLNIGHKRASGQM RIAVALRDRLPKVAALYLQGRLSARLISEISWRTRLVDGEQVLGLVDAALAEAALRWGPLSEARLARALDAVIHRYDRDA VIRAKDTVKTRDFHIGSGDDPDELVLVWGQLLGCDAAALSARIAALLKGICDNDPRSVGERRSCAVGAIVQGHDHLPCRC GSPACAAAAPEKSNVVISVIADPAAVEAAQMLIAAEDEHHAEQDEPEPVPCQKDSGVALLPGVKLLPIVALAEAIRGGAA IKPLWLPGPDPEPHYRPSAKLAAFVRARDLFCRFPGCDVPAERCDIDHVVPWPYGPTHASNLNCKCRTHHLGKTFWDGWR DEQSPDGTVTWTTPTGKRHTTVPGSRLFFPEWDNTTAPLPPLEQPPPDPGRTAKMPKRRRTRAADNAARVKAEREHNAAA RAMADHAANADPPPPAPHPDYGDDPPPF >Mature_508_residues MFDTVFAGLEESALLAAIEQAAREEAQAGARRLAAIAQLVHLTVTCDEECDGWVYDSWAAAASEVGAVLNIGHKRASGQM RIAVALRDRLPKVAALYLQGRLSARLISEISWRTRLVDGEQVLGLVDAALAEAALRWGPLSEARLARALDAVIHRYDRDA VIRAKDTVKTRDFHIGSGDDPDELVLVWGQLLGCDAAALSARIAALLKGICDNDPRSVGERRSCAVGAIVQGHDHLPCRC GSPACAAAAPEKSNVVISVIADPAAVEAAQMLIAAEDEHHAEQDEPEPVPCQKDSGVALLPGVKLLPIVALAEAIRGGAA IKPLWLPGPDPEPHYRPSAKLAAFVRARDLFCRFPGCDVPAERCDIDHVVPWPYGPTHASNLNCKCRTHHLGKTFWDGWR DEQSPDGTVTWTTPTGKRHTTVPGSRLFFPEWDNTTAPLPPLEQPPPDPGRTAKMPKRRRTRAADNAARVKAEREHNAAA RAMADHAANADPPPPAPHPDYGDDPPPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv3776 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003870 - InterPro: IPR003615 [H]
Pfam domain/function: PF02720 DUF222 [H]
EC number: NA
Molecular weight: Translated: 54744; Mature: 54744
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDTVFAGLEESALLAAIEQAAREEAQAGARRLAAIAQLVHLTVTCDEECDGWVYDSWAA CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEHHHHH AASEVGAVLNIGHKRASGQMRIAVALRDRLPKVAALYLQGRLSARLISEISWRTRLVDGE HHHHHHHHHHCCCCCCCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCHH QVLGLVDAALAEAALRWGPLSEARLARALDAVIHRYDRDAVIRAKDTVKTRDFHIGSGDD HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCEECEEECCCCCC PDELVLVWGQLLGCDAAALSARIAALLKGICDNDPRSVGERRSCAVGAIVQGHDHLPCRC HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHCCHHCCCCEEEEECCCCCCCCC GSPACAAAAPEKSNVVISVIADPAAVEAAQMLIAAEDEHHAEQDEPEPVPCQKDSGVALL CCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCEEEC PGVKLLPIVALAEAIRGGAAIKPLWLPGPDPEPHYRPSAKLAAFVRARDLFCRFPGCDVP CCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCC AERCDIDHVVPWPYGPTHASNLNCKCRTHHLGKTFWDGWRDEQSPDGTVTWTTPTGKRHT HHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCCCCCCEEEECCCCCCCCC TVPGSRLFFPEWDNTTAPLPPLEQPPPDPGRTAKMPKRRRTRAADNAARVKAEREHNAAA CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHH RAMADHAANADPPPPAPHPDYGDDPPPF HHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFDTVFAGLEESALLAAIEQAAREEAQAGARRLAAIAQLVHLTVTCDEECDGWVYDSWAA CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEHHHHH AASEVGAVLNIGHKRASGQMRIAVALRDRLPKVAALYLQGRLSARLISEISWRTRLVDGE HHHHHHHHHHCCCCCCCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCHH QVLGLVDAALAEAALRWGPLSEARLARALDAVIHRYDRDAVIRAKDTVKTRDFHIGSGDD HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCEECEEECCCCCC PDELVLVWGQLLGCDAAALSARIAALLKGICDNDPRSVGERRSCAVGAIVQGHDHLPCRC HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHCCHHCCCCEEEEECCCCCCCCC GSPACAAAAPEKSNVVISVIADPAAVEAAQMLIAAEDEHHAEQDEPEPVPCQKDSGVALL CCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCEEEC PGVKLLPIVALAEAIRGGAAIKPLWLPGPDPEPHYRPSAKLAAFVRARDLFCRFPGCDVP CCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCC AERCDIDHVVPWPYGPTHASNLNCKCRTHHLGKTFWDGWRDEQSPDGTVTWTTPTGKRHT HHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCCCCCCEEEECCCCCCCCC TVPGSRLFFPEWDNTTAPLPPLEQPPPDPGRTAKMPKRRRTRAADNAARVKAEREHNAAA CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHH RAMADHAANADPPPPAPHPDYGDDPPPF HHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]