| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
Click here to switch to the map view.
The map label for this gene is 119869791
Identifier: 119869791
GI number: 119869791
Start: 3979142
End: 3979531
Strand: Direct
Name: 119869791
Synonym: Mkms_3760
Alternate gene names: NA
Gene position: 3979142-3979531 (Clockwise)
Preceding gene: 119869790
Following gene: 119869792
Centisome position: 69.36
GC content: 67.44
Gene sequence:
>390_bases ATGGACAAGGACAAGACGCCCCGCCTGGCGCAGGGGCGTGAACACATCGTCGCCACCGTCGACGAGATCCCACCCGGCTC ACACAAGATCGTGCCGATCGGCCGCCACGGCGTCGGCGTCTACAACGTCAACGGCACCTTCTATGCGATCGCCAACTACT GCCCGCACGAAGGCGGTCCCCTGTGCCTCGGCCGCGCCCGCGGGCGCACCGTGGTCGACGACGACGTGCCCGGCGACGCG GTGATGGTGCGCGACCTCGAGTACATCTACTGCCCCTGGCACCAGTGGGGTTTCGAGTTGGCGACCGGAACCACCGCGGT CAAACCGGAGTGGAGCATCCGCACCTACCCGGTCCGCGTGGTCGGCAACGACGTGCTGGTGATGGCATGA
Upstream 100 bases:
>100_bases ACATACCCGTGAAGCAATCATGTTCCGCAACGGCATCGAGACCTACAAGCTGCCGGACACCGTGCCGGCTCTCGAGGGCC AGGTGCGGGTTTTCTGACAC
Downstream 100 bases:
>100_bases CGACAACCGACGACACCACCGAGCAGGTGGGCCCGCAACTCAAGCGCGGCGAGAAGGTCATCGAGATCAACGGCGGCAGG GTCGTCTACGAGATCCTCGG
Product: Rieske (2Fe-2S) domain-containing protein
Products: NA
Alternate protein names: Rieske Iron-Sulphur Domain Protein; Rieske Iron-Sulfur Domain Protein; Dioxygenase Ferredoxin Subunit; Nitrite Reductase Small Subunit; Ferredoxin; Rieske-Type Ferredoxin; Rieske Domain Protein; Rieske Region; 2Fe-2S Ferredoxin; Fe-S Protein; Pyruvate Dehydrogenase
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MDKDKTPRLAQGREHIVATVDEIPPGSHKIVPIGRHGVGVYNVNGTFYAIANYCPHEGGPLCLGRARGRTVVDDDVPGDA VMVRDLEYIYCPWHQWGFELATGTTAVKPEWSIRTYPVRVVGNDVLVMA
Sequences:
>Translated_129_residues MDKDKTPRLAQGREHIVATVDEIPPGSHKIVPIGRHGVGVYNVNGTFYAIANYCPHEGGPLCLGRARGRTVVDDDVPGDA VMVRDLEYIYCPWHQWGFELATGTTAVKPEWSIRTYPVRVVGNDVLVMA >Mature_129_residues MDKDKTPRLAQGREHIVATVDEIPPGSHKIVPIGRHGVGVYNVNGTFYAIANYCPHEGGPLCLGRARGRTVVDDDVPGDA VMVRDLEYIYCPWHQWGFELATGTTAVKPEWSIRTYPVRVVGNDVLVMA
Specific function: Unknown
COG id: COG2146
COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14229; Mature: 14229
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKDKTPRLAQGREHIVATVDEIPPGSHKIVPIGRHGVGVYNVNGTFYAIANYCPHEGGP CCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCEEEECCCEEEEEEECCCCCCCC LCLGRARGRTVVDDDVPGDAVMVRDLEYIYCPWHQWGFELATGTTAVKPEWSIRTYPVRV EEEECCCCCEEECCCCCCCEEEEEECEEEEECCHHCCEEEECCCEEECCCCCEEEEEEEE VGNDVLVMA ECCEEEEEC >Mature Secondary Structure MDKDKTPRLAQGREHIVATVDEIPPGSHKIVPIGRHGVGVYNVNGTFYAIANYCPHEGGP CCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCEEEECCCEEEEEEECCCCCCCC LCLGRARGRTVVDDDVPGDAVMVRDLEYIYCPWHQWGFELATGTTAVKPEWSIRTYPVRV EEEECCCCCEEECCCCCCCEEEEEECEEEEECCHHCCEEEECCCEEECCCCCEEEEEEEE VGNDVLVMA ECCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA