| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119869765
Identifier: 119869765
GI number: 119869765
Start: 3951953
End: 3953095
Strand: Direct
Name: 119869765
Synonym: Mkms_3733
Alternate gene names: NA
Gene position: 3951953-3953095 (Clockwise)
Preceding gene: 119869764
Following gene: 119869766
Centisome position: 68.88
GC content: 66.58
Gene sequence:
>1143_bases ATGAACGACGTAGCCATCATCGGCGTCGGCCTGCATCCCTTCGGCCGGTTCGACAAGACCGCGATGGAGATGGGCGCCGA GGCGATCCAGTTCGCGCTGGCCGACGCGAAACTGGAGTGGAAGGACATTCAGTTCGGCTTCGGCGGCAGCTACGAGGTGT CCAACCCCGATGCCGTCACCCGGCTGGTCGGCCTCACCGGAATCACGTTCACCAACGTGTTCAACGCCTGCGCCACGGCG GCCAGCGCGATCCAGCAGACCGCTGACACGATCCGCCTGGGCAAGTACGACATCGGCATCGCCATCGGACTCGACAAACA CCCCCGCGGTGCGTTCACCGACGATCCGGCCAAACTCGCCCTGCCACAGTGGTATGCCGAGAACGGTCAGTTCGTCACCA CGAAGTTCTTCGGCATGAAGGCCAATCACTACCTCCACAAGCACGGCATCTCCGAGGAGACGCTGGCGCGGGTGGCCAAC AAGAACTTCCGCAACGGCGAACGGAATCCGAATGCGTTCCGCCGCAAGGAGATCTCGGTCGACGAGATCATGGCGTCACC GGTTCTGAACTACCCGTTGCGGCAGTACATGTTCTGCGCACCCGACGAGGGCGCCGCCGCGGTGATCATGTGCCGCGGTG ACATCGCCCACCGCTACACCGACAAGCCGGTATTCCTGCGCGCCAGCGAGATCCGCACACGGACGTTCGGCGCCTACGAG GTGCACGCCACCTCGGCGCCGCTGGACGAGGACGCCTCCCCCACCGTCTACGCCGCGCGCGCCGCCTACGAGATCGCCGG AATCGGACCCGAGGATGTCGACATCGCCCAGCTGCAGGACACCGACGCCGGCGCGGAGGTCATCCACATGGCCGAGACCG GATTGTGCGCCGACGGTGAGCAGGAGAAGTTGCTCGCCGACGGGGCCACCGAGATCGGTGGCAGCATCCCGGTCAACACC GACGGCGGCCTGATCGCCAACGGGGAGCCCATCGGCGCATCCGGTCTGCGCCAGGTGCACGAACTCGTCCGCCAACTGCG CGGGGAGGCCGGCGACCGCCAGGTACCCGGCGAGCCGAAAGTCGGTCTGGCACAGGTGTACGGCGCGCCCGGCACCGCCT CGGCGACCATCCTGACGGTCTGA
Upstream 100 bases:
>100_bases GAGCTGACCATGATTCCGTTCACCAAGGACGAGGACGGCGAGGACATCGTCACATTCGCCTTCCAACCGGTCTGAGGCCG ACGAGAGGAACAGTCGAGAT
Downstream 100 bases:
>100_bases CGTCGGTGACGAATCGGAACCCGGCGCGAGACTATCGTTCTAGGATTCGCAAATGAAGCTTTCGCAGACGAACGGGCGGA CGCGGCGGTCCGTTTTGCCG
Product: thiolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MNDVAIIGVGLHPFGRFDKTAMEMGAEAIQFALADAKLEWKDIQFGFGGSYEVSNPDAVTRLVGLTGITFTNVFNACATA ASAIQQTADTIRLGKYDIGIAIGLDKHPRGAFTDDPAKLALPQWYAENGQFVTTKFFGMKANHYLHKHGISEETLARVAN KNFRNGERNPNAFRRKEISVDEIMASPVLNYPLRQYMFCAPDEGAAAVIMCRGDIAHRYTDKPVFLRASEIRTRTFGAYE VHATSAPLDEDASPTVYAARAAYEIAGIGPEDVDIAQLQDTDAGAEVIHMAETGLCADGEQEKLLADGATEIGGSIPVNT DGGLIANGEPIGASGLRQVHELVRQLRGEAGDRQVPGEPKVGLAQVYGAPGTASATILTV
Sequences:
>Translated_380_residues MNDVAIIGVGLHPFGRFDKTAMEMGAEAIQFALADAKLEWKDIQFGFGGSYEVSNPDAVTRLVGLTGITFTNVFNACATA ASAIQQTADTIRLGKYDIGIAIGLDKHPRGAFTDDPAKLALPQWYAENGQFVTTKFFGMKANHYLHKHGISEETLARVAN KNFRNGERNPNAFRRKEISVDEIMASPVLNYPLRQYMFCAPDEGAAAVIMCRGDIAHRYTDKPVFLRASEIRTRTFGAYE VHATSAPLDEDASPTVYAARAAYEIAGIGPEDVDIAQLQDTDAGAEVIHMAETGLCADGEQEKLLADGATEIGGSIPVNT DGGLIANGEPIGASGLRQVHELVRQLRGEAGDRQVPGEPKVGLAQVYGAPGTASATILTV >Mature_380_residues MNDVAIIGVGLHPFGRFDKTAMEMGAEAIQFALADAKLEWKDIQFGFGGSYEVSNPDAVTRLVGLTGITFTNVFNACATA ASAIQQTADTIRLGKYDIGIAIGLDKHPRGAFTDDPAKLALPQWYAENGQFVTTKFFGMKANHYLHKHGISEETLARVAN KNFRNGERNPNAFRRKEISVDEIMASPVLNYPLRQYMFCAPDEGAAAVIMCRGDIAHRYTDKPVFLRASEIRTRTFGAYE VHATSAPLDEDASPTVYAARAAYEIAGIGPEDVDIAQLQDTDAGAEVIHMAETGLCADGEQEKLLADGATEIGGSIPVNT DGGLIANGEPIGASGLRQVHELVRQLRGEAGDRQVPGEPKVGLAQVYGAPGTASATILTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI19923233, Length=398, Percent_Identity=30.9045226130653, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI302344760, Length=332, Percent_Identity=32.5301204819277, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI302344767, Length=325, Percent_Identity=32.6153846153846, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI302344762, Length=308, Percent_Identity=31.8181818181818, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI55956775, Length=266, Percent_Identity=28.5714285714286, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17537653, Length=391, Percent_Identity=28.6445012787724, Blast_Score=139, Evalue=3e-33, Organism=Drosophila melanogaster, GI24585051, Length=372, Percent_Identity=29.3010752688172, Blast_Score=142, Evalue=4e-34, Organism=Drosophila melanogaster, GI19921506, Length=372, Percent_Identity=28.7634408602151, Blast_Score=140, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020617 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: NA
Molecular weight: Translated: 40686; Mature: 40686
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDVAIIGVGLHPFGRFDKTAMEMGAEAIQFALADAKLEWKDIQFGFGGSYEVSNPDAVT CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCHHHHH RLVGLTGITFTNVFNACATAASAIQQTADTIRLGKYDIGIAIGLDKHPRGAFTDDPAKLA HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEEEECCCCCCCCCCCCCHHHC LPQWYAENGQFVTTKFFGMKANHYLHKHGISEETLARVANKNFRNGERNPNAFRRKEISV CCHHHCCCCCEEEEEEECCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHCCCH DEIMASPVLNYPLRQYMFCAPDEGAAAVIMCRGDIAHRYTDKPVFLRASEIRTRTFGAYE HHHHHHHHHCCCHHHCEEECCCCCCEEEEEECCCHHHHCCCCCEEEEHHHHHHEECCEEE VHATSAPLDEDASPTVYAARAAYEIAGIGPEDVDIAQLQDTDAGAEVIHMAETGLCADGE EEECCCCCCCCCCCCEEEEEHEEEEECCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCC QEKLLADGATEIGGSIPVNTDGGLIANGEPIGASGLRQVHELVRQLRGEAGDRQVPGEPK HHHHHHCCHHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC VGLAQVYGAPGTASATILTV CCCEEEECCCCCCCEEEEEC >Mature Secondary Structure MNDVAIIGVGLHPFGRFDKTAMEMGAEAIQFALADAKLEWKDIQFGFGGSYEVSNPDAVT CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCHHHHH RLVGLTGITFTNVFNACATAASAIQQTADTIRLGKYDIGIAIGLDKHPRGAFTDDPAKLA HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEEEECCCCCCCCCCCCCHHHC LPQWYAENGQFVTTKFFGMKANHYLHKHGISEETLARVANKNFRNGERNPNAFRRKEISV CCHHHCCCCCEEEEEEECCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHCCCH DEIMASPVLNYPLRQYMFCAPDEGAAAVIMCRGDIAHRYTDKPVFLRASEIRTRTFGAYE HHHHHHHHHCCCHHHCEEECCCCCCEEEEEECCCHHHHCCCCCEEEEHHHHHHEECCEEE VHATSAPLDEDASPTVYAARAAYEIAGIGPEDVDIAQLQDTDAGAEVIHMAETGLCADGE EEECCCCCCCCCCCCEEEEEHEEEEECCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCC QEKLLADGATEIGGSIPVNTDGGLIANGEPIGASGLRQVHELVRQLRGEAGDRQVPGEPK HHHHHHCCHHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC VGLAQVYGAPGTASATILTV CCCEEEECCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]