| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
Click here to switch to the map view.
The map label for this gene is 119869692
Identifier: 119869692
GI number: 119869692
Start: 3857146
End: 3858732
Strand: Direct
Name: 119869692
Synonym: Mkms_3660
Alternate gene names: NA
Gene position: 3857146-3858732 (Clockwise)
Preceding gene: 119869691
Following gene: 119869697
Centisome position: 67.23
GC content: 69.88
Gene sequence:
>1587_bases GTGACGTTGTCGAGGCGGGAACTGCTGGCACGCACGTCCGCCGCGGCCGCCTCGGCCCTGCTCGCGGGCTGCTCGACGAA CGGCCCGCGCACCGTCGTCGACGTCCGCGCCCACGGCGCCACCGGTGACGGGATCACCGATGACTCCCGGGCGGTCCAGG CGGCTGCAGCCGCACTGCGCCCGGGGAGCACCCTTCGGTTCTCCAGGGGGACATACCGATTCGCACAGCGTTGGCCGCCC GGCGGGGCCGCGGTCGTCATCTCGGGTTTGGCCGATGTCCGCGTCGAATTCGATCCGGGCGCGGAGCTGTACATGGACAA CCTGCATCCGACGAAGCACACCGGGAGCAGTCACGGCCTGCTCGTCCGCGGTCCGGCGTCCCGAATCCACCTGCGGGGAC TGAACATCCGGTGGGCAGACGGCGCACGGCGCTCACTCGGTGACGGCATCCGGGTGGAGGGCTTTCCCGATCTGGACGGC GCACAACCGAAGGGCTGGTCCGGGCAGTCCAGGCCGGTCACCGAGGTGACCGTCTCCGACTGCACCGTGAGGTCGAGCCC GCAGACCGGGGTGGTCATGATGGGTGTCTCCGACATCGAGGTGACGGGGCTGCGGGTGACCGACAGCGGCGCGGACGGAC TCCACTTCAACGCCTGCCGGCGCGCGACGGTGACCGAGTACAGCGCGGTGAACACCGGCGACGACGGGCTCGCGCTGGTG ACGTACTTCGAAGCCGAGCCGACTTTCGATCCTGCCGCGCACACCTTTTCGTTGCCGGAGCTGACCGACTGGTCGAACGC GGACTTCACCGTCGAGAACGTCAACGTGTTCGGCTGCCGGGCGAACGGGGTACGGCTCGCGGGTGCCCACCGCGTCACCG TCGAGGGTCTCGACGTCGTCGGCGTCCATGCCGGTTCGGCGTTTCTCATCGACTCCGCGGAACCGGGCACCGACGTCGGG TGGCACTACGTCGCCAGCCGTGCGGTCCGCCTCGACGACGTCACCGCGACCGACTGCGACATGGGGATCCATCTGCTGGC CCGGCCTGGCACGTCCGGGGACCCGCGCTTCACCGACTTCGACATCCACGTCGGCGACGCGACGATCGACGATTGCCCCA CCTGGGCGGTCCGCGCCGAGTCGCTGACGGACACGCGGGTCAACGGCATGCGCATCGACAACTGCAGCGTCACGACCGCC TCCACGACGGGCGGCAACGGCGGCGTGGGCGTCGGCGATGCGAACGGAATCACGTTCGGCATCATGACGATACGCCACGC CGAACCGGTCATCGCATTTCAGACCGTGAACGCCGGAGCGCTCACCGTCGAGAAGCTCGGCGTGGCGATCACGCGACGGG ACCGGCCCGAGGGGAAGCTCGATCCCTGTGTCCGGCTCGACAATTCCGACGGCGTCATCGATCAGCTGACCATCGGCTGG CCGGCCGCCGGCGACGGGTGGGTGCCAGTCCGTCTCTCCGAACCCGGGCCGTGCGAGGACGACATCGGCGAAACGCCGCT CGCCATCCGCGGCCTGACGGTCACGCCGCCGGTCGAGCGTCCTTCGGCGGTCGTATGCGGGCGGTGA
Upstream 100 bases:
>100_bases TGGCCAGGCGCGGCCACGCGCACGTGCTGGCACGCCAGCAGCAGATCCGCCCGACCGCGGCGGCCGATGCGATCTTCGGC GAACTCGTCGGCAGCCGCAC
Downstream 100 bases:
>100_bases CCAGTGCGCTGCCCGCGGTCAGCAGCAGCAGGAAGATGACGATGCCGTACACCAGGATCTGCACCCGCCAGACCTCGAGG AAGCAGTACGCCACCACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 528; Mature: 527
Protein sequence:
>528_residues MTLSRRELLARTSAAAASALLAGCSTNGPRTVVDVRAHGATGDGITDDSRAVQAAAAALRPGSTLRFSRGTYRFAQRWPP GGAAVVISGLADVRVEFDPGAELYMDNLHPTKHTGSSHGLLVRGPASRIHLRGLNIRWADGARRSLGDGIRVEGFPDLDG AQPKGWSGQSRPVTEVTVSDCTVRSSPQTGVVMMGVSDIEVTGLRVTDSGADGLHFNACRRATVTEYSAVNTGDDGLALV TYFEAEPTFDPAAHTFSLPELTDWSNADFTVENVNVFGCRANGVRLAGAHRVTVEGLDVVGVHAGSAFLIDSAEPGTDVG WHYVASRAVRLDDVTATDCDMGIHLLARPGTSGDPRFTDFDIHVGDATIDDCPTWAVRAESLTDTRVNGMRIDNCSVTTA STTGGNGGVGVGDANGITFGIMTIRHAEPVIAFQTVNAGALTVEKLGVAITRRDRPEGKLDPCVRLDNSDGVIDQLTIGW PAAGDGWVPVRLSEPGPCEDDIGETPLAIRGLTVTPPVERPSAVVCGR
Sequences:
>Translated_528_residues MTLSRRELLARTSAAAASALLAGCSTNGPRTVVDVRAHGATGDGITDDSRAVQAAAAALRPGSTLRFSRGTYRFAQRWPP GGAAVVISGLADVRVEFDPGAELYMDNLHPTKHTGSSHGLLVRGPASRIHLRGLNIRWADGARRSLGDGIRVEGFPDLDG AQPKGWSGQSRPVTEVTVSDCTVRSSPQTGVVMMGVSDIEVTGLRVTDSGADGLHFNACRRATVTEYSAVNTGDDGLALV TYFEAEPTFDPAAHTFSLPELTDWSNADFTVENVNVFGCRANGVRLAGAHRVTVEGLDVVGVHAGSAFLIDSAEPGTDVG WHYVASRAVRLDDVTATDCDMGIHLLARPGTSGDPRFTDFDIHVGDATIDDCPTWAVRAESLTDTRVNGMRIDNCSVTTA STTGGNGGVGVGDANGITFGIMTIRHAEPVIAFQTVNAGALTVEKLGVAITRRDRPEGKLDPCVRLDNSDGVIDQLTIGW PAAGDGWVPVRLSEPGPCEDDIGETPLAIRGLTVTPPVERPSAVVCGR >Mature_527_residues TLSRRELLARTSAAAASALLAGCSTNGPRTVVDVRAHGATGDGITDDSRAVQAAAAALRPGSTLRFSRGTYRFAQRWPPG GAAVVISGLADVRVEFDPGAELYMDNLHPTKHTGSSHGLLVRGPASRIHLRGLNIRWADGARRSLGDGIRVEGFPDLDGA QPKGWSGQSRPVTEVTVSDCTVRSSPQTGVVMMGVSDIEVTGLRVTDSGADGLHFNACRRATVTEYSAVNTGDDGLALVT YFEAEPTFDPAAHTFSLPELTDWSNADFTVENVNVFGCRANGVRLAGAHRVTVEGLDVVGVHAGSAFLIDSAEPGTDVGW HYVASRAVRLDDVTATDCDMGIHLLARPGTSGDPRFTDFDIHVGDATIDDCPTWAVRAESLTDTRVNGMRIDNCSVTTAS TTGGNGGVGVGDANGITFGIMTIRHAEPVIAFQTVNAGALTVEKLGVAITRRDRPEGKLDPCVRLDNSDGVIDQLTIGWP AAGDGWVPVRLSEPGPCEDDIGETPLAIRGLTVTPPVERPSAVVCGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55467; Mature: 55336
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSRRELLARTSAAAASALLAGCSTNGPRTVVDVRAHGATGDGITDDSRAVQAAAAALR CCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCC PGSTLRFSRGTYRFAQRWPPGGAAVVISGLADVRVEFDPGAELYMDNLHPTKHTGSSHGL CCCEEEECCCCEEHHHHCCCCCCEEEEECCEEEEEEECCCCEEEECCCCCCCCCCCCCCE LVRGPASRIHLRGLNIRWADGARRSLGDGIRVEGFPDLDGAQPKGWSGQSRPVTEVTVSD EEECCCCEEEEEEEEEEECCCCHHHHCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECC CTVRSSPQTGVVMMGVSDIEVTGLRVTDSGADGLHFNACRRATVTEYSAVNTGDDGLALV EEECCCCCCCEEEEECCCEEEEEEEEECCCCCCEEEHHHCCCEEEEEEECCCCCCCEEEE TYFEAEPTFDPAAHTFSLPELTDWSNADFTVENVNVFGCRANGVRLAGAHRVTVEGLDVV EEEECCCCCCCCCCEECCCCCCCCCCCCEEEEEEEEEEEECCCEEEECCEEEEEECCEEE GVHAGSAFLIDSAEPGTDVGWHYVASRAVRLDDVTATDCDMGIHLLARPGTSGDPRFTDF EEECCCEEEEECCCCCCCCCHHHHHHCEEEECCCEECCCCCCEEEEECCCCCCCCCEEEE DIHVGDATIDDCPTWAVRAESLTDTRVNGMRIDNCSVTTASTTGGNGGVGVGDANGITFG EEEECCCCCCCCCCEEEEECCCCCCCCCCEEECCCEEEEECCCCCCCCCCCCCCCCEEEE IMTIRHAEPVIAFQTVNAGALTVEKLGVAITRRDRPEGKLDPCVRLDNSDGVIDQLTIGW EEEEECCCCEEEEEECCCCEEEEEHHCEEEEECCCCCCCCCCEEEECCCCCCEEEEEECC PAAGDGWVPVRLSEPGPCEDDIGETPLAIRGLTVTPPVERPSAVVCGR CCCCCCEEEEEECCCCCCCHHCCCCCEEEEEEEECCCCCCCCEEECCC >Mature Secondary Structure TLSRRELLARTSAAAASALLAGCSTNGPRTVVDVRAHGATGDGITDDSRAVQAAAAALR CCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCC PGSTLRFSRGTYRFAQRWPPGGAAVVISGLADVRVEFDPGAELYMDNLHPTKHTGSSHGL CCCEEEECCCCEEHHHHCCCCCCEEEEECCEEEEEEECCCCEEEECCCCCCCCCCCCCCE LVRGPASRIHLRGLNIRWADGARRSLGDGIRVEGFPDLDGAQPKGWSGQSRPVTEVTVSD EEECCCCEEEEEEEEEEECCCCHHHHCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECC CTVRSSPQTGVVMMGVSDIEVTGLRVTDSGADGLHFNACRRATVTEYSAVNTGDDGLALV EEECCCCCCCEEEEECCCEEEEEEEEECCCCCCEEEHHHCCCEEEEEEECCCCCCCEEEE TYFEAEPTFDPAAHTFSLPELTDWSNADFTVENVNVFGCRANGVRLAGAHRVTVEGLDVV EEEECCCCCCCCCCEECCCCCCCCCCCCEEEEEEEEEEEECCCEEEECCEEEEEECCEEE GVHAGSAFLIDSAEPGTDVGWHYVASRAVRLDDVTATDCDMGIHLLARPGTSGDPRFTDF EEECCCEEEEECCCCCCCCCHHHHHHCEEEECCCEECCCCCCEEEEECCCCCCCCCEEEE DIHVGDATIDDCPTWAVRAESLTDTRVNGMRIDNCSVTTASTTGGNGGVGVGDANGITFG EEEECCCCCCCCCCEEEEECCCCCCCCCCEEECCCEEEEECCCCCCCCCCCCCCCCEEEE IMTIRHAEPVIAFQTVNAGALTVEKLGVAITRRDRPEGKLDPCVRLDNSDGVIDQLTIGW EEEEECCCCEEEEEECCCCEEEEEHHCEEEEECCCCCCCCCCEEEECCCCCCEEEEEECC PAAGDGWVPVRLSEPGPCEDDIGETPLAIRGLTVTPPVERPSAVVCGR CCCCCCEEEEEECCCCCCCHHCCCCCEEEEEEEECCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA