| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119869579
Identifier: 119869579
GI number: 119869579
Start: 3739755
End: 3741788
Strand: Direct
Name: 119869579
Synonym: Mkms_3547
Alternate gene names: NA
Gene position: 3739755-3741788 (Clockwise)
Preceding gene: 119869573
Following gene: 119869580
Centisome position: 65.18
GC content: 68.58
Gene sequence:
>2034_bases ATGATGGCGGGCATGGTTCTGGAACACACCGAGCCCACCGACGGAGCCGCGACGATCGGGCAGCCGGCCTATCTGCCCGA CACTCCGTTGACGGTGACGGCGCCGGTCCCCTACGCGCCGACCGGTGGGCTGCGGAACCCGTTCCCGCCCATCGCCGACT ACGGCTTCCTGTCCGACTGCGAGAACACGTGCCTGATCTCCTCGGCCGGCTCCGTCGAGTGGCTGTGCGTGCCCCGCCCG GATTCGCCGAGCGTGTTCGGCGCGATCCTCGACCGCGGTGCAGGTCACTTCCGGCTCGGCCCGTACGGCGTGACGGTGCC CGCGGCGCGGCGTTACCTGCCGGGCAGCCTGATCCTCGAGACCACGTGGCAGACCCACACCGGCTGGCTGATCGTGCGCG ACACCCTGGTGATGGGTCCCTGGCACGACCTCGAGGCGCGGTCGCGCACCCACCGGCGCACGCCGATGGACTGGGATGCC GAGCACATCCTGTTGCGCACCGTGCGGTGTGTCAGCGGCACCGTCGAGCTGGTGATGAACTGTGAGCCGTCGTTCGACTA CCACCGGGTGAGCGCCGAGTGGGAGTACTCCGGCCCGGCCTACGGTGAGGCGATCGCGCGGGCCAACCGCAACGCCGACT CCCATCCGACACTGCGGCTCACCACGAACCTGCGGATCGGGTTGGAGGGCCGCGAGGCCAGGGCCCGCACCCGGCTCAAG GAGGGCGACAACGTCTTCGTGGCGCTGTCCTGGTCGAAGCATCCGGCGCCGCAGAACTACGAAGAGGCCGCCGACAAGAT GTGGCAGACCAGCGAGGCGTGGCGGCAGTGGATCAACGTCGGCGACTTCCCCGACCACCCGTGGCGGGCGTACCTGCAGC GCAGCGCGCTCACCCTCAAGGGCCTGACCTACTCCCCGACCGGCGCGCTGTTGGCCGCGAGCACCACGTCGTTGCCGGAA ACACCTCAGGGCGAACGCAATTGGGACTACCGCTACGCGTGGGTGCGGGATTCGACGTTCGCGCTGTGGGGTCTCTACAC ACTGGGCCTGGACCGCGAGGCCGACGACTTCTTCGCGTTCATCGCCGACGTGTCCGGCGCCAACAACGGGGAGCGCCACC CGCTGCAGGTGATGTACGGCGTCGGGGGTGAGCGCAGCCTGGTCGAGGAGGAACTGCACCACCTGTCGGGGTACGACGGC GCCCGCCCGGTGCGGATCGGCAACGGTGCCTACAACCAGATGCAGCACGACATCTGGGGCACCATGCTCGATTCGGTCTA CCTGCACACCAAGTCGCGTGAGCAGATCCCCGAGGCGTTGTGGCCGGTGCTCAAGCACCAGGTCGAGGAGGCCATCAAGC ACTGGAAGGAACCCGACCGCGGCATCTGGGAGGTCCGCGGCGAACCGCAGCACTTCACCAGTTCGAAGGTGATGTGCTGG GTGGCGCTCGACCGTGGCGCGAAGCTCGCCGAACTCGAGGGCGAGAAGAGCTACGCCCAGGAGTGGCGCACCATCGCCGA GCAGATCAAGGCCGACATCCTCGCCAACGGCGTCGACTCGCGGGGCGTGTTCACCCAGCGTTACGGCGACGACGCGCTGG ACGCCTCCCTGCTGCTGGTGCCGCTGGTCCGGTTCCTGCCGCCGGACGACCCGCGGGTGCGGGCCACGGTGCTGGCGATC GCCGACGAGCTGACCGAGGAGGGTCTGGTCCTGCGCTACCGCGTCGAGGAGACCGACGACGGGTTGGCCGGCGAGGAGGG CACGTTCACGATCTGCTCGTTCTGGCTGGTGTCGGCGCTCGTGGAGATCGGTGAGATCAGCCGTGCCAAGCACCTGTGTG AACGGTTGTTGTCGTTCTCCAGTCCGCTGCACCTCTACGCCGAGGAAATCGAACCCCGCACCGGCCGCCACCTGGGCAAC TTCCCGCAGGCGTTCACCCACCTGGCGTTGATCAACGCGGTCGTGCACGTCATCCGCGCCGAGGAGGAAGCCGACAGCTC GGGGGTCTTCGTCCCGGCCAACGCGCCGTCGTAA
Upstream 100 bases:
>100_bases ATGCGATGGCCCGGTCCGCGACGGCGGGCCGTCGGCGCTGTCACCGCTCAGCAACGGCCGGACATGGGGTTTGAGTAGAC GCCGAGCACGTCGGCAGTCG
Downstream 100 bases:
>100_bases GGAGACGTTCAGCGGGAAGTCAGGATCACGGTGTATCCATGTCTTGCCAGACGCAGCACCGACTCATCACGATGGTGTTG TCAGTGAGGGGGAAGTATGG
Product: glycoside hydrolase 15-like protein
Products: NA
Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase Family; Glucoamylase; Glycoside Hydrolase Family Protein; Trehalose-Phosphatase; Glucoamylase-Like Glycosyl Hydrolase; Glycosyl Hydrolase Glucoamylase; Trehalose Phosphatase; Glucoamylase Or Related Glycosyl Hydrolase Protein; Glucoamylase Or Related Glycosyl Hydrolase; Six-Hairpin Glycosidase-Like Protein; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Glycosyl Hydrolase Protein; Glycosyl Hydrolase Family Protein; Trehalose-Phosphatase/Glycoside Hydrolase
Number of amino acids: Translated: 677; Mature: 677
Protein sequence:
>677_residues MMAGMVLEHTEPTDGAATIGQPAYLPDTPLTVTAPVPYAPTGGLRNPFPPIADYGFLSDCENTCLISSAGSVEWLCVPRP DSPSVFGAILDRGAGHFRLGPYGVTVPAARRYLPGSLILETTWQTHTGWLIVRDTLVMGPWHDLEARSRTHRRTPMDWDA EHILLRTVRCVSGTVELVMNCEPSFDYHRVSAEWEYSGPAYGEAIARANRNADSHPTLRLTTNLRIGLEGREARARTRLK EGDNVFVALSWSKHPAPQNYEEAADKMWQTSEAWRQWINVGDFPDHPWRAYLQRSALTLKGLTYSPTGALLAASTTSLPE TPQGERNWDYRYAWVRDSTFALWGLYTLGLDREADDFFAFIADVSGANNGERHPLQVMYGVGGERSLVEEELHHLSGYDG ARPVRIGNGAYNQMQHDIWGTMLDSVYLHTKSREQIPEALWPVLKHQVEEAIKHWKEPDRGIWEVRGEPQHFTSSKVMCW VALDRGAKLAELEGEKSYAQEWRTIAEQIKADILANGVDSRGVFTQRYGDDALDASLLLVPLVRFLPPDDPRVRATVLAI ADELTEEGLVLRYRVEETDDGLAGEEGTFTICSFWLVSALVEIGEISRAKHLCERLLSFSSPLHLYAEEIEPRTGRHLGN FPQAFTHLALINAVVHVIRAEEEADSSGVFVPANAPS
Sequences:
>Translated_677_residues MMAGMVLEHTEPTDGAATIGQPAYLPDTPLTVTAPVPYAPTGGLRNPFPPIADYGFLSDCENTCLISSAGSVEWLCVPRP DSPSVFGAILDRGAGHFRLGPYGVTVPAARRYLPGSLILETTWQTHTGWLIVRDTLVMGPWHDLEARSRTHRRTPMDWDA EHILLRTVRCVSGTVELVMNCEPSFDYHRVSAEWEYSGPAYGEAIARANRNADSHPTLRLTTNLRIGLEGREARARTRLK EGDNVFVALSWSKHPAPQNYEEAADKMWQTSEAWRQWINVGDFPDHPWRAYLQRSALTLKGLTYSPTGALLAASTTSLPE TPQGERNWDYRYAWVRDSTFALWGLYTLGLDREADDFFAFIADVSGANNGERHPLQVMYGVGGERSLVEEELHHLSGYDG ARPVRIGNGAYNQMQHDIWGTMLDSVYLHTKSREQIPEALWPVLKHQVEEAIKHWKEPDRGIWEVRGEPQHFTSSKVMCW VALDRGAKLAELEGEKSYAQEWRTIAEQIKADILANGVDSRGVFTQRYGDDALDASLLLVPLVRFLPPDDPRVRATVLAI ADELTEEGLVLRYRVEETDDGLAGEEGTFTICSFWLVSALVEIGEISRAKHLCERLLSFSSPLHLYAEEIEPRTGRHLGN FPQAFTHLALINAVVHVIRAEEEADSSGVFVPANAPS >Mature_677_residues MMAGMVLEHTEPTDGAATIGQPAYLPDTPLTVTAPVPYAPTGGLRNPFPPIADYGFLSDCENTCLISSAGSVEWLCVPRP DSPSVFGAILDRGAGHFRLGPYGVTVPAARRYLPGSLILETTWQTHTGWLIVRDTLVMGPWHDLEARSRTHRRTPMDWDA EHILLRTVRCVSGTVELVMNCEPSFDYHRVSAEWEYSGPAYGEAIARANRNADSHPTLRLTTNLRIGLEGREARARTRLK EGDNVFVALSWSKHPAPQNYEEAADKMWQTSEAWRQWINVGDFPDHPWRAYLQRSALTLKGLTYSPTGALLAASTTSLPE TPQGERNWDYRYAWVRDSTFALWGLYTLGLDREADDFFAFIADVSGANNGERHPLQVMYGVGGERSLVEEELHHLSGYDG ARPVRIGNGAYNQMQHDIWGTMLDSVYLHTKSREQIPEALWPVLKHQVEEAIKHWKEPDRGIWEVRGEPQHFTSSKVMCW VALDRGAKLAELEGEKSYAQEWRTIAEQIKADILANGVDSRGVFTQRYGDDALDASLLLVPLVRFLPPDDPRVRATVLAI ADELTEEGLVLRYRVEETDDGLAGEEGTFTICSFWLVSALVEIGEISRAKHLCERLLSFSSPLHLYAEEIEPRTGRHLGN FPQAFTHLALINAVVHVIRAEEEADSSGVFVPANAPS
Specific function: Unknown
COG id: COG3387
COG function: function code G; Glucoamylase and related glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75630; Mature: 75630
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAGMVLEHTEPTDGAATIGQPAYLPDTPLTVTAPVPYAPTGGLRNPFPPIADYGFLSDC CCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHCC ENTCLISSAGSVEWLCVPRPDSPSVFGAILDRGAGHFRLGPYGVTVPAARRYLPGSLILE CCCEEEECCCCEEEEEECCCCCCHHHHHHHHCCCCCEEECCCCCCCHHHHHHCCCCEEEE TTWQTHTGWLIVRDTLVMGPWHDLEARSRTHRRTPMDWDAEHILLRTVRCVSGTVELVMN ECCCCCCCEEEEEEEEEECCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEE CEPSFDYHRVSAEWEYSGPAYGEAIARANRNADSHPTLRLTTNLRIGLEGREARARTRLK CCCCCCEEEECCEECCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHC EGDNVFVALSWSKHPAPQNYEEAADKMWQTSEAWRQWINVGDFPDHPWRAYLQRSALTLK CCCCEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHCCEEEE GLTYSPTGALLAASTTSLPETPQGERNWDYRYAWVRDSTFALWGLYTLGLDREADDFFAF CCEECCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEEHHEECCCCCHHHHHHH IADVSGANNGERHPLQVMYGVGGERSLVEEELHHLSGYDGARPVRIGNGAYNQMQHDIWG HHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHH TMLDSVYLHTKSREQIPEALWPVLKHQVEEAIKHWKEPDRGIWEVRGEPQHFTSSKVMCW HHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEE VALDRGAKLAELEGEKSYAQEWRTIAEQIKADILANGVDSRGVFTQRYGDDALDASLLLV EEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHH PLVRFLPPDDPRVRATVLAIADELTEEGLVLRYRVEETDDGLAGEEGTFTICSFWLVSAL HHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH VEIGEISRAKHLCERLLSFSSPLHLYAEEIEPRTGRHLGNFPQAFTHLALINAVVHVIRA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH EEEADSSGVFVPANAPS HCCCCCCCEEEECCCCC >Mature Secondary Structure MMAGMVLEHTEPTDGAATIGQPAYLPDTPLTVTAPVPYAPTGGLRNPFPPIADYGFLSDC CCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHCC ENTCLISSAGSVEWLCVPRPDSPSVFGAILDRGAGHFRLGPYGVTVPAARRYLPGSLILE CCCEEEECCCCEEEEEECCCCCCHHHHHHHHCCCCCEEECCCCCCCHHHHHHCCCCEEEE TTWQTHTGWLIVRDTLVMGPWHDLEARSRTHRRTPMDWDAEHILLRTVRCVSGTVELVMN ECCCCCCCEEEEEEEEEECCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEE CEPSFDYHRVSAEWEYSGPAYGEAIARANRNADSHPTLRLTTNLRIGLEGREARARTRLK CCCCCCEEEECCEECCCCCHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHC EGDNVFVALSWSKHPAPQNYEEAADKMWQTSEAWRQWINVGDFPDHPWRAYLQRSALTLK CCCCEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHCCEEEE GLTYSPTGALLAASTTSLPETPQGERNWDYRYAWVRDSTFALWGLYTLGLDREADDFFAF CCEECCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEEHHEECCCCCHHHHHHH IADVSGANNGERHPLQVMYGVGGERSLVEEELHHLSGYDGARPVRIGNGAYNQMQHDIWG HHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHH TMLDSVYLHTKSREQIPEALWPVLKHQVEEAIKHWKEPDRGIWEVRGEPQHFTSSKVMCW HHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEE VALDRGAKLAELEGEKSYAQEWRTIAEQIKADILANGVDSRGVFTQRYGDDALDASLLLV EEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHH PLVRFLPPDDPRVRATVLAIADELTEEGLVLRYRVEETDDGLAGEEGTFTICSFWLVSAL HHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH VEIGEISRAKHLCERLLSFSSPLHLYAEEIEPRTGRHLGNFPQAFTHLALINAVVHVIRA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH EEEADSSGVFVPANAPS HCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA