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The map label for this gene is ycjC [C]

Identifier: 119869435

GI number: 119869435

Start: 3569732

End: 3570313

Strand: Direct

Name: ycjC [C]

Synonym: Mkms_3403

Alternate gene names: 119869435

Gene position: 3569732-3570313 (Clockwise)

Preceding gene: 119869432

Following gene: 119869440

Centisome position: 62.22

GC content: 69.59

Gene sequence:

>582_bases
ATGCAGGCAAACGAGGCGTCCGAGGACAGCGTGGACCAACGGGTACGCAAGCGGTTGCGGGAACTGCGCCGCCAGCGTGG
GTTCACCCTCGAGGAGGTGGCGGCCAGGTCGGCCATCGACGTGTCGACGCTGAGCCGCCTGGAGTCCGGTAAGCGACGCT
TGGCCCTCGACCATCTCCCCCGGTTGGCCGCCGCGCTGGCGGTCACCACCGACGAACTGCTGCGCAGCCCGGAGGCGGAG
GACCCGCGGGTGCGTTCGGATTCGCACACCCGCCACGGGGTCACGTACTGGCCGCTGACCCGTCAGGGGTCGCCGAGCGG
TCTGCACGCGTTCAAGCTCCGGGTCAGCGCCCGCAGGCGCAAACCACCCGAAGACCTACCCGTGCACGAGGGTCAGGACT
GGATGTACGTGCTGTCCGGACGGCTGCGGCTGATCCTCGGCGACCGCGACTTCATCGTCGAACCCGGTGAGGCCGTTGAG
TTCTCGACGTGGACACCGCACTGGTTCGGGGTGGTCGACGGCCCGGTGGAGGCGATCGGGATCTTCGGCCCGCACGGCGA
GCGCCTCCACCTGCACACCTAG

Upstream 100 bases:

>100_bases
CTCAGTCCGGCGGCGCCGCCGCCGATGATCACGCAATCCCAGATGTCGTCCATGTCCCGAGGTTGCCGTGTAGCCGCTAC
AGGTGGCAAGCTTATTTGCC

Downstream 100 bases:

>100_bases
AGGTGGGCGGTCTGGTTGACCAGCCGCACCGACGATCCACCGTCGGGGTAGAACTCCGCGATGCTCAGCGAGGCGAGATC
CAGGTGCAGCCGGTACAGGA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator XRE Family; Regulatory Protein; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Domain-Containing Protein; Cupin 2 Conserved Barrel Domain Protein; Cro/CI Family Transcriptional Regulator

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MQANEASEDSVDQRVRKRLRELRRQRGFTLEEVAARSAIDVSTLSRLESGKRRLALDHLPRLAAALAVTTDELLRSPEAE
DPRVRSDSHTRHGVTYWPLTRQGSPSGLHAFKLRVSARRRKPPEDLPVHEGQDWMYVLSGRLRLILGDRDFIVEPGEAVE
FSTWTPHWFGVVDGPVEAIGIFGPHGERLHLHT

Sequences:

>Translated_193_residues
MQANEASEDSVDQRVRKRLRELRRQRGFTLEEVAARSAIDVSTLSRLESGKRRLALDHLPRLAAALAVTTDELLRSPEAE
DPRVRSDSHTRHGVTYWPLTRQGSPSGLHAFKLRVSARRRKPPEDLPVHEGQDWMYVLSGRLRLILGDRDFIVEPGEAVE
FSTWTPHWFGVVDGPVEAIGIFGPHGERLHLHT
>Mature_193_residues
MQANEASEDSVDQRVRKRLRELRRQRGFTLEEVAARSAIDVSTLSRLESGKRRLALDHLPRLAAALAVTTDELLRSPEAE
DPRVRSDSHTRHGVTYWPLTRQGSPSGLHAFKLRVSARRRKPPEDLPVHEGQDWMYVLSGRLRLILGDRDFIVEPGEAVE
FSTWTPHWFGVVDGPVEAIGIFGPHGERLHLHT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21891; Mature: 21891

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQANEASEDSVDQRVRKRLRELRRQRGFTLEEVAARSAIDVSTLSRLESGKRRLALDHLP
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHH
RLAAALAVTTDELLRSPEAEDPRVRSDSHTRHGVTYWPLTRQGSPSGLHAFKLRVSARRR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEHHHHC
KPPEDLPVHEGQDWMYVLSGRLRLILGDRDFIVEPGEAVEFSTWTPHWFGVVDGPVEAIG
CCCCCCCCCCCCCEEEEECCCEEEEECCCCEEECCCCCEEECCCCCCEEEEECCCEEEEE
IFGPHGERLHLHT
EECCCCCEEEECC
>Mature Secondary Structure
MQANEASEDSVDQRVRKRLRELRRQRGFTLEEVAARSAIDVSTLSRLESGKRRLALDHLP
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHH
RLAAALAVTTDELLRSPEAEDPRVRSDSHTRHGVTYWPLTRQGSPSGLHAFKLRVSARRR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEHHHHC
KPPEDLPVHEGQDWMYVLSGRLRLILGDRDFIVEPGEAVEFSTWTPHWFGVVDGPVEAIG
CCCCCCCCCCCCCEEEEECCCEEEEECCCCEEECCCCCEEECCCCCCEEEEECCCEEEEE
IFGPHGERLHLHT
EECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA