| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119869432
Identifier: 119869432
GI number: 119869432
Start: 3567256
End: 3568158
Strand: Direct
Name: 119869432
Synonym: Mkms_3400
Alternate gene names: NA
Gene position: 3567256-3568158 (Clockwise)
Preceding gene: 119869431
Following gene: 119869435
Centisome position: 62.18
GC content: 70.32
Gene sequence:
>903_bases ATGTGCCCGGCACCTGACGCAGTCCTGCAGGAGAACCATCCGACCGCGAGGGCGTGGGCCGAACCCCGCGGCGTCCGCCG ACGGGGTGTCGGCTGGTTCCTGATCCTGGCGTTCGCCGGCGCATGGATCCCCTGGTTCGGCGTCCACCTGGCGGGCGGGT CGTTGGACGATCCCGTCATCCAACTGCTCACCGCCGCCTTCGTCCCCGCCCTGGCCGCCTGCGTGGTGCGTCGATGGGTG ACCCGGCAGGGTTTTCGCGATTCCGGCATGCGGTTGCGGCTGCGGACATCGTGGCGGCATTACGCGGCGGCCGTGACGAT CCCGTGGGGTGTGCTGCTCCTGGCCGTCGGTATCGCCGCGGCGACCGGCATGTGGTCACCGCAATCGACGGATCTGAGTG CGTCCTCGTGGCTGTACCTGGCCGCAGGCCCGCTGATCTGCATCGCGCTGTCGCCGGTCTTCTGGGGTGAGGAGTACGGC TGGACGGCGTACCTGCGCGACCGCCTCGTGCCCGGCCGTCCGATCCTCACCACGTTCCTCACCGGGCTGATCTGGGGGCT GTGGCACTGGCCGCTGCCCTGGGTGGGCTACTTCGGCGGCGACGCCCCGGTGTCGGATGCGGTGTGGGGCATGCTGCTGT GGCTGCCGCTGAGCATCCTGCTCGAGTTCCTGATCGGCTGGCTGTGGTCGGAGACCGGGTCGGTGTGGCCGGGGGCGATG CTGCACGCCGGCGCCAACATGGTGGCGTCGCTGGGGATGATGGTCGTCTTCGGCGACGCGGTCGGCATCACCGGTACGAC GGTGCTGCTGTGCGCCGCCTTGGTGCCGTTCGTGCTCGCAGTCGTCCTCACCGGCCACACCGCGGGCCGGATCCGTCCGA TCAGCGGCGCCGCAACAGGATGA
Upstream 100 bases:
>100_bases GTGGGAGTCGCCGGAGGAGTTGGAGGACCGCTACTCCACGAGGCGGTGCCGAGCCCCAGCGGGGTGACCCACCACCTGTT CTGGCGATCATGATGGGAGC
Downstream 100 bases:
>100_bases CGTTGTCCAGCCACGTCACCGGCTGCCCGTCGGGGCTCACCCCGTCCCGCTCGACCGCCTCGACCCGGAGTTCCTCCCAG GCCTCGGGGTCCACCGCCAG
Product: abortive infection protein
Products: NA
Alternate protein names: Integral Membrane Protein; Caax Amino Terminal Protease Family
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MCPAPDAVLQENHPTARAWAEPRGVRRRGVGWFLILAFAGAWIPWFGVHLAGGSLDDPVIQLLTAAFVPALAACVVRRWV TRQGFRDSGMRLRLRTSWRHYAAAVTIPWGVLLLAVGIAAATGMWSPQSTDLSASSWLYLAAGPLICIALSPVFWGEEYG WTAYLRDRLVPGRPILTTFLTGLIWGLWHWPLPWVGYFGGDAPVSDAVWGMLLWLPLSILLEFLIGWLWSETGSVWPGAM LHAGANMVASLGMMVVFGDAVGITGTTVLLCAALVPFVLAVVLTGHTAGRIRPISGAATG
Sequences:
>Translated_300_residues MCPAPDAVLQENHPTARAWAEPRGVRRRGVGWFLILAFAGAWIPWFGVHLAGGSLDDPVIQLLTAAFVPALAACVVRRWV TRQGFRDSGMRLRLRTSWRHYAAAVTIPWGVLLLAVGIAAATGMWSPQSTDLSASSWLYLAAGPLICIALSPVFWGEEYG WTAYLRDRLVPGRPILTTFLTGLIWGLWHWPLPWVGYFGGDAPVSDAVWGMLLWLPLSILLEFLIGWLWSETGSVWPGAM LHAGANMVASLGMMVVFGDAVGITGTTVLLCAALVPFVLAVVLTGHTAGRIRPISGAATG >Mature_300_residues MCPAPDAVLQENHPTARAWAEPRGVRRRGVGWFLILAFAGAWIPWFGVHLAGGSLDDPVIQLLTAAFVPALAACVVRRWV TRQGFRDSGMRLRLRTSWRHYAAAVTIPWGVLLLAVGIAAATGMWSPQSTDLSASSWLYLAAGPLICIALSPVFWGEEYG WTAYLRDRLVPGRPILTTFLTGLIWGLWHWPLPWVGYFGGDAPVSDAVWGMLLWLPLSILLEFLIGWLWSETGSVWPGAM LHAGANMVASLGMMVVFGDAVGITGTTVLLCAALVPFVLAVVLTGHTAGRIRPISGAATG
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32392; Mature: 32392
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCPAPDAVLQENHPTARAWAEPRGVRRRGVGWFLILAFAGAWIPWFGVHLAGGSLDDPVI CCCCCCHHHHCCCCCHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHH QLLTAAFVPALAACVVRRWVTRQGFRDSGMRLRLRTSWRHYAAAVTIPWGVLLLAVGIAA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHEEEEHHHHHHHHHHHHHH ATGMWSPQSTDLSASSWLYLAAGPLICIALSPVFWGEEYGWTAYLRDRLVPGRPILTTFL HHCCCCCCCCCCCCCCEEEEHHCCEEEEEECHHHCCCCCCHHHHHHHCCCCCCHHHHHHH TGLIWGLWHWPLPWVGYFGGDAPVSDAVWGMLLWLPLSILLEFLIGWLWSETGSVWPGAM HHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH LHAGANMVASLGMMVVFGDAVGITGTTVLLCAALVPFVLAVVLTGHTAGRIRPISGAATG HHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCC >Mature Secondary Structure MCPAPDAVLQENHPTARAWAEPRGVRRRGVGWFLILAFAGAWIPWFGVHLAGGSLDDPVI CCCCCCHHHHCCCCCHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHH QLLTAAFVPALAACVVRRWVTRQGFRDSGMRLRLRTSWRHYAAAVTIPWGVLLLAVGIAA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHEEEEHHHHHHHHHHHHHH ATGMWSPQSTDLSASSWLYLAAGPLICIALSPVFWGEEYGWTAYLRDRLVPGRPILTTFL HHCCCCCCCCCCCCCCEEEEHHCCEEEEEECHHHCCCCCCHHHHHHHCCCCCCHHHHHHH TGLIWGLWHWPLPWVGYFGGDAPVSDAVWGMLLWLPLSILLEFLIGWLWSETGSVWPGAM HHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH LHAGANMVASLGMMVVFGDAVGITGTTVLLCAALVPFVLAVVLTGHTAGRIRPISGAATG HHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA