| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119869431
Identifier: 119869431
GI number: 119869431
Start: 3566572
End: 3567222
Strand: Direct
Name: 119869431
Synonym: Mkms_3399
Alternate gene names: NA
Gene position: 3566572-3567222 (Clockwise)
Preceding gene: 119869430
Following gene: 119869432
Centisome position: 62.17
GC content: 68.05
Gene sequence:
>651_bases ATGAGTTCAGCCGCTCTCCGTGGTCCCACTGTCATGCCCCAACTCCTCAGAGTCCAGAACTTCAACGTCTCCAGCGACGG TTTCGGCGCCGGCGAGAACCAGAGCCTCGAACGGCCTTTCGGCCACGTCGACCCGGGTGACATGTTCGCGTGGGCCGGCG CGACCGCGAGCTGGCCCAACCGCACCGACCCCGGCGGCAGCCGCGGGCTCGACGACTACTTCACCCGGGACTTCACCAAC AACATCGGCGCCGAGATCATGGGCCGTAACAAGTTCAGCCCCCATCGCGGCCCGTGGCGCGACCACGAATGGCAGGGCTG GTGGGGCGACGAACCACCGTTCCACACCCCGGTCTTCGTGATGACCCATCATCCGCGCCCGTCGTTCACCCTGTCCGACA CCACGTTCCACTTCGTCGACGATGCCCCCGCCGCAGTCCTCGAACAGGCCCGCGAGGCCGCGCAGGGCAGAGACGTCCGG TTGGGCGGCGGCGCGACGGTCATTCGACAGTTCCTCGACGCGGGCCTGGTGGACACGCTGCACGTCGCGGTATCCGATGT GCGCATCGGACGGGGATCGCGACTGTGGGAGTCGCCGGAGGAGTTGGAGGACCGCTACTCCACGAGGCGGTGCCGAGCCC CAGCGGGGTGA
Upstream 100 bases:
>100_bases ACGTAATCCGTGCGGCGAGTGTGCGTCCACTGCGAAGATCCGGGCGATTCTTCGCACTGGGCGCACGTTCGGCGCGGTCG GCCGGGCGCGCGAATGACCG
Downstream 100 bases:
>100_bases CCCACCACCTGTTCTGGCGATCATGATGGGAGCATGTGCCCGGCACCTGACGCAGTCCTGCAGGAGAACCATCCGACCGC GAGGGCGTGGGCCGAACCCC
Product: DNA-binding protein
Products: NA
Alternate protein names: Deaminase-Reductase Domain-Containing Protein; Bifunctional Deaminase-Reductase Domain-Containing Protein; Riboflavin Biosynthesis Protein RibD; Bifunctional Deaminase-Reductase-Like; Bifunctional Deaminase-Reductase-Like Protein; Dihydrofolate Reductase; Riboflavin Biosynthesis Protein; Deaminase-Reductase; RibD Domain-Containing Protein; 5-Amino-6-(5-Phosphoribosylamino)Uracil Reductase; Dihydrofolate Reductase Protein; Riboflavin Biosynthesis Protein RibD Domain Protein; Bifunctional Deaminase-Reductase C-Terminal Protein; Bifunctional Deaminase-Reductase C-Terminal; Deaminase/Reductase
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MSSAALRGPTVMPQLLRVQNFNVSSDGFGAGENQSLERPFGHVDPGDMFAWAGATASWPNRTDPGGSRGLDDYFTRDFTN NIGAEIMGRNKFSPHRGPWRDHEWQGWWGDEPPFHTPVFVMTHHPRPSFTLSDTTFHFVDDAPAAVLEQAREAAQGRDVR LGGGATVIRQFLDAGLVDTLHVAVSDVRIGRGSRLWESPEELEDRYSTRRCRAPAG
Sequences:
>Translated_216_residues MSSAALRGPTVMPQLLRVQNFNVSSDGFGAGENQSLERPFGHVDPGDMFAWAGATASWPNRTDPGGSRGLDDYFTRDFTN NIGAEIMGRNKFSPHRGPWRDHEWQGWWGDEPPFHTPVFVMTHHPRPSFTLSDTTFHFVDDAPAAVLEQAREAAQGRDVR LGGGATVIRQFLDAGLVDTLHVAVSDVRIGRGSRLWESPEELEDRYSTRRCRAPAG >Mature_215_residues SSAALRGPTVMPQLLRVQNFNVSSDGFGAGENQSLERPFGHVDPGDMFAWAGATASWPNRTDPGGSRGLDDYFTRDFTNN IGAEIMGRNKFSPHRGPWRDHEWQGWWGDEPPFHTPVFVMTHHPRPSFTLSDTTFHFVDDAPAAVLEQAREAAQGRDVRL GGGATVIRQFLDAGLVDTLHVAVSDVRIGRGSRLWESPEELEDRYSTRRCRAPAG
Specific function: Unknown
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23960; Mature: 23828
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAALRGPTVMPQLLRVQNFNVSSDGFGAGENQSLERPFGHVDPGDMFAWAGATASWPN CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC RTDPGGSRGLDDYFTRDFTNNIGAEIMGRNKFSPHRGPWRDHEWQGWWGDEPPFHTPVFV CCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE MTHHPRPSFTLSDTTFHFVDDAPAAVLEQAREAAQGRDVRLGGGATVIRQFLDAGLVDTL EEECCCCCEEECCCEEEEECCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCHHHHH HVAVSDVRIGRGSRLWESPEELEDRYSTRRCRAPAG HHHHHHHEECCCCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SSAALRGPTVMPQLLRVQNFNVSSDGFGAGENQSLERPFGHVDPGDMFAWAGATASWPN CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC RTDPGGSRGLDDYFTRDFTNNIGAEIMGRNKFSPHRGPWRDHEWQGWWGDEPPFHTPVFV CCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE MTHHPRPSFTLSDTTFHFVDDAPAAVLEQAREAAQGRDVRLGGGATVIRQFLDAGLVDTL EEECCCCCEEECCCEEEEECCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCHHHHH HVAVSDVRIGRGSRLWESPEELEDRYSTRRCRAPAG HHHHHHHEECCCCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA