| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119869418
Identifier: 119869418
GI number: 119869418
Start: 3550482
End: 3551564
Strand: Direct
Name: 119869418
Synonym: Mkms_3386
Alternate gene names: NA
Gene position: 3550482-3551564 (Clockwise)
Preceding gene: 119869417
Following gene: 119869419
Centisome position: 61.88
GC content: 70.45
Gene sequence:
>1083_bases TTGAGCAGGCATGACCTCGAACTCGGCGCCGAACACGCGGCCACCCGGGAGCAGCTGTGGAACGCAGTCCTCGATGGTGA CGAATATGCCGCGGCCGCAGCGGTTTTCGCCGCGATCGACCGGGGCGTGAGCGCCGAGGTCGTCCTGCTCGAGGTCATCG CGCCGGTACAGCACCGCGTCGGTACCGAGTGGGCCGCCAATCGGATCACCGTCGCCGAGGAACACGCAGCCACGGCCATC AACGACCGGGTGATCGCGGCGCTGGCGCATCACCCCGCCAGCGCGCCCACCACGACGTGCGGGCGCGTGACGGTGGCGTG TGTGGACGGCGAATGGCACGCGCTGCCCGCACGACTGCTCGCCGAGGTGCTGCGCCTGCGGGGCTGGCAGGTCGACTTCC TGGGCGCGCAGGTGCCCACTCCCCACCTCATCGCCCATCTGCACCGGACCGGCCCGGTGGCCGTGGCGCTGTCGTGTTCC ATCCCGACCCGGCTGCCCACCGCGCACGCCGCGATCACCGCGTGCCAGGCCGCAGGCGTTCCCGTCATCGCCGGCGGCGC CGCATTCGCGCCCGACGGGCGTCACGCCCGCCGGTTGGGCGCGGACGCCTGGGGTCCGGACGCCCGCGTCGCCGCGGACC TCCTCGGCCGGGGTCTGACCAGAGACCACCACACCTCGGCGCACCAACCCATCGACGATCTGCCACATCTGGGCGACCAG GAGTACACCATGGTCGGCCGGACCGCTCCGCAGCTGGTCAAGGCGACCGTCGGCGATCTGGAGGACCGCTTCCCGGCGAT GCGGACCTACACCGAACGGCAACGCCAGCACACCACCGAGGACATCGCCCACATCGTCGATTTCCTCGCCACCGCGCTCT ACCTCGACGACGACGATCTGTTCACCGGATTCGTCACGTGGACCGCCGACATCCTCGCCGCGCGCGGCGTACCGGCCACC TCGCTTCACCCCGCGTTGGAATCTCTGCAGGCTCAGCTGGTGGAGTTCCCACGCACTCAGCGGCTCCTGAACGCCGCCTT GACCGCCCTGGACCACACCGCCGACATGGAACAGATCGTATGA
Upstream 100 bases:
>100_bases GTCGCCGCGAGCACGACGACATCGCCGTCGTCGCCATCACCGCCCCACGCCGGACGCACCTCAGCGCGGTCGACGGCCAC ACCGCCGGGAGGTACACCGC
Downstream 100 bases:
>100_bases ACCTGACCTCCTCCCTCGACGCCGCCGACCGGTCGGCCACCGTCCGCATCGCCGGTGAGCTCGACGCCGAGACGACCTCG GAGTTCGTCGACACCGCATC
Product: cobalamin B12-binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MSRHDLELGAEHAATREQLWNAVLDGDEYAAAAAVFAAIDRGVSAEVVLLEVIAPVQHRVGTEWAANRITVAEEHAATAI NDRVIAALAHHPASAPTTTCGRVTVACVDGEWHALPARLLAEVLRLRGWQVDFLGAQVPTPHLIAHLHRTGPVAVALSCS IPTRLPTAHAAITACQAAGVPVIAGGAAFAPDGRHARRLGADAWGPDARVAADLLGRGLTRDHHTSAHQPIDDLPHLGDQ EYTMVGRTAPQLVKATVGDLEDRFPAMRTYTERQRQHTTEDIAHIVDFLATALYLDDDDLFTGFVTWTADILAARGVPAT SLHPALESLQAQLVEFPRTQRLLNAALTALDHTADMEQIV
Sequences:
>Translated_360_residues MSRHDLELGAEHAATREQLWNAVLDGDEYAAAAAVFAAIDRGVSAEVVLLEVIAPVQHRVGTEWAANRITVAEEHAATAI NDRVIAALAHHPASAPTTTCGRVTVACVDGEWHALPARLLAEVLRLRGWQVDFLGAQVPTPHLIAHLHRTGPVAVALSCS IPTRLPTAHAAITACQAAGVPVIAGGAAFAPDGRHARRLGADAWGPDARVAADLLGRGLTRDHHTSAHQPIDDLPHLGDQ EYTMVGRTAPQLVKATVGDLEDRFPAMRTYTERQRQHTTEDIAHIVDFLATALYLDDDDLFTGFVTWTADILAARGVPAT SLHPALESLQAQLVEFPRTQRLLNAALTALDHTADMEQIV >Mature_359_residues SRHDLELGAEHAATREQLWNAVLDGDEYAAAAAVFAAIDRGVSAEVVLLEVIAPVQHRVGTEWAANRITVAEEHAATAIN DRVIAALAHHPASAPTTTCGRVTVACVDGEWHALPARLLAEVLRLRGWQVDFLGAQVPTPHLIAHLHRTGPVAVALSCSI PTRLPTAHAAITACQAAGVPVIAGGAAFAPDGRHARRLGADAWGPDARVAADLLGRGLTRDHHTSAHQPIDDLPHLGDQE YTMVGRTAPQLVKATVGDLEDRFPAMRTYTERQRQHTTEDIAHIVDFLATALYLDDDDLFTGFVTWTADILAARGVPATS LHPALESLQAQLVEFPRTQRLLNAALTALDHTADMEQIV
Specific function: Unknown
COG id: COG5012
COG function: function code R; Predicted cobalamin binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38611; Mature: 38480
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRHDLELGAEHAATREQLWNAVLDGDEYAAAAAVFAAIDRGVSAEVVLLEVIAPVQHRV CCCCCCHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC GTEWAANRITVAEEHAATAINDRVIAALAHHPASAPTTTCGRVTVACVDGEWHALPARLL CCHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHH AEVLRLRGWQVDFLGAQVPTPHLIAHLHRTGPVAVALSCSIPTRLPTAHAAITACQAAGV HHHHHHCCCCEEECCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCC PVIAGGAAFAPDGRHARRLGADAWGPDARVAADLLGRGLTRDHHTSAHQPIDDLPHLGDQ CEEECCCEECCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCC EYTMVGRTAPQLVKATVGDLEDRFPAMRTYTERQRQHTTEDIAHIVDFLATALYLDDDDL CEEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCH FTGFVTWTADILAARGVPATSLHPALESLQAQLVEFPRTQRLLNAALTALDHTADMEQIV HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SRHDLELGAEHAATREQLWNAVLDGDEYAAAAAVFAAIDRGVSAEVVLLEVIAPVQHRV CCCCCHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC GTEWAANRITVAEEHAATAINDRVIAALAHHPASAPTTTCGRVTVACVDGEWHALPARLL CCHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHH AEVLRLRGWQVDFLGAQVPTPHLIAHLHRTGPVAVALSCSIPTRLPTAHAAITACQAAGV HHHHHHCCCCEEECCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCC PVIAGGAAFAPDGRHARRLGADAWGPDARVAADLLGRGLTRDHHTSAHQPIDDLPHLGDQ CEEECCCEECCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCC EYTMVGRTAPQLVKATVGDLEDRFPAMRTYTERQRQHTTEDIAHIVDFLATALYLDDDDL CEEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCH FTGFVTWTADILAARGVPATSLHPALESLQAQLVEFPRTQRLLNAALTALDHTADMEQIV HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA