| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is aepA [H]
Identifier: 119869412
GI number: 119869412
Start: 3543717
End: 3545468
Strand: Direct
Name: aepA [H]
Synonym: Mkms_3380
Alternate gene names: 119869412
Gene position: 3543717-3545468 (Clockwise)
Preceding gene: 119869411
Following gene: 119869414
Centisome position: 61.77
GC content: 70.72
Gene sequence:
>1752_bases GTGTTGCGGGCCGCGGCGACGGTGGCGGCGGCGTCCGCGGTGAGCGCGTGCTCCTCCCCGGCGCAGCAGTCCCCCGCCCC GGCCGGCTCCCCGGGCTCCGCAAACGCCCACGCGGACTTTGTGTTCCGCAACGGTGCGGTCTACACCGTCGACGGCCCGG CGCCGTGGGCGCAGGCGCTGGCCGTCAGGGGCGACACGATCGTCCACGTCGGCGACGAGGCGGGTGCGATGGCGCTGGCC GGACCGGCGACCCGGGTGGTCGACCTCGGCGGCCGCCTGCTGATGCCGGGCTTCGTGGAAGGCCACACCCACCCGTTCCT GGGCGCGTTCCTCACCTCGGGCGTCGATCTTCAGGTGCCGACGCTGGCCGATGCGCTGAGCGCGATCGAGGCGTACGCGA AGGACAACCCGACCGGGCCGGTGCGCGGATTCGGTTGGCGGGTGGACATGTTCGGACCCGACGGGCCCGACCGCGCCGAA CTCGACCGCATTCTGCCCGACCGGCCGGCGTTCTTCTTCGCCATCGACGGGCACAGCCTGTGGGCCAACAGCACCGCGCT CGAGATGGCGGGCGTCAAGCGCGACACCCCCGACCCGATACCGGGTTTCAGCTACTACGCCCGCGACACGAACGGTGACC CGACCGGTTACATCCTCGAGGTGAACGCGGTGCTCGGCCTGGTCGACGCCGTCGAGCCGATCTCCCCGGACACCATGGGC ACGCTCATGGAGGGTTGGCTGCCGAAGGCGTCGGCCGCCGGGATCACGTCGGTGTTCGACGCGGGTGTGCCGCCCATCGG CGACGACCAGGCGGCGTTGCTGCGCCTCTACGCCGACGTCGAACAGCGCGGTGCGCTGCCGTTCCGCGTCGTCGCGTCCT ATTCGGTCCGCTCCGCACCGGTCGACGGTGCGGTCGACGCGCTCGAGGCGGTCCGCGAGCAGGTGTCCGGCGAGTTGGTG TCCGTCGACGTCGTCAAGATCGTCGGAGACGGCACCCAGGGCGGCTACACCGCCTGGCTCGTCGAGCCCTACGCCGACAA ACCCGACTCGACCGGCGGGTCCCCGTTCACCGAGGAGCAGTGGCATCAGCTCATCGGTGCGGTCGACGCCGCGGGGTACG ACGTGCACGTCCACGCCTGCGGGGAACGCACCGCCCGCGTCGCCCTCGACGCCGTCGAGCGCGCGATCGCCTCGAATCCG CGCCGTGACCGTCGGCATGCGATCGCCCACCTGGTGTTCGTCGAGGACAGCGACAATCCCCGCTTCGGCGCCCTCGGGGT CACCGCCCAGTTCTCGGCGAACTGGATGTCGGCGGATCCCGACACCCTCGAGAACATGGGCGCGCGCTACGGGTCACCGC GAAAAGACCTGCTCTACCGCCCGCAGGCGGTGCTGAGATCCGGCGGCCGGATCTCGCTGGGCACCGACTGGCCGGCCGCC GGCTACTTCTCCACGTACAAACCGCTCGACTCGATCCAGGTCGGGGTGACCCGGCAGCTGATCGGGCAGACCGACGCGCC GGTGCTCGAACCCGCCGACCAGCGGTTGTCGGTGGCCGAGGCGATTTACGCCAACACACTCGGTGCGGCGCACCAGTTGC GGCTCGACCACAAGGTGGGCTCACTCGAGGTCGGCAAGCTCGCCGACCTCATCGTGCTCGACCGCAACATCCTCGAGATC GACCCGCACGACATCCACCGGGCCAACGTCACGATGACGATGATGAACGGGCAGATCCGCCACGAGACCTGA
Upstream 100 bases:
>100_bases CCCGGGCCGGTGGTCACCGGCCATACTTCCGCGGGTGTGTACTGCGTGCGAGTGGGCGCCCCATTTCCTGTCGTTCGGTG GCCGGACCACCCGTCGCACG
Downstream 100 bases:
>100_bases CACCGAACGCGAACTCGTGCGCGATCTTCGTGCCGATCTTCGAGCACTAGCTCACGTTCAGCGCCGCACCACGGCGGTCT TGGTGGCCAGGTCGTGCAGG
Product: amidohydrolase 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 583; Mature: 583
Protein sequence:
>583_residues MLRAAATVAAASAVSACSSPAQQSPAPAGSPGSANAHADFVFRNGAVYTVDGPAPWAQALAVRGDTIVHVGDEAGAMALA GPATRVVDLGGRLLMPGFVEGHTHPFLGAFLTSGVDLQVPTLADALSAIEAYAKDNPTGPVRGFGWRVDMFGPDGPDRAE LDRILPDRPAFFFAIDGHSLWANSTALEMAGVKRDTPDPIPGFSYYARDTNGDPTGYILEVNAVLGLVDAVEPISPDTMG TLMEGWLPKASAAGITSVFDAGVPPIGDDQAALLRLYADVEQRGALPFRVVASYSVRSAPVDGAVDALEAVREQVSGELV SVDVVKIVGDGTQGGYTAWLVEPYADKPDSTGGSPFTEEQWHQLIGAVDAAGYDVHVHACGERTARVALDAVERAIASNP RRDRRHAIAHLVFVEDSDNPRFGALGVTAQFSANWMSADPDTLENMGARYGSPRKDLLYRPQAVLRSGGRISLGTDWPAA GYFSTYKPLDSIQVGVTRQLIGQTDAPVLEPADQRLSVAEAIYANTLGAAHQLRLDHKVGSLEVGKLADLIVLDRNILEI DPHDIHRANVTMTMMNGQIRHET
Sequences:
>Translated_583_residues MLRAAATVAAASAVSACSSPAQQSPAPAGSPGSANAHADFVFRNGAVYTVDGPAPWAQALAVRGDTIVHVGDEAGAMALA GPATRVVDLGGRLLMPGFVEGHTHPFLGAFLTSGVDLQVPTLADALSAIEAYAKDNPTGPVRGFGWRVDMFGPDGPDRAE LDRILPDRPAFFFAIDGHSLWANSTALEMAGVKRDTPDPIPGFSYYARDTNGDPTGYILEVNAVLGLVDAVEPISPDTMG TLMEGWLPKASAAGITSVFDAGVPPIGDDQAALLRLYADVEQRGALPFRVVASYSVRSAPVDGAVDALEAVREQVSGELV SVDVVKIVGDGTQGGYTAWLVEPYADKPDSTGGSPFTEEQWHQLIGAVDAAGYDVHVHACGERTARVALDAVERAIASNP RRDRRHAIAHLVFVEDSDNPRFGALGVTAQFSANWMSADPDTLENMGARYGSPRKDLLYRPQAVLRSGGRISLGTDWPAA GYFSTYKPLDSIQVGVTRQLIGQTDAPVLEPADQRLSVAEAIYANTLGAAHQLRLDHKVGSLEVGKLADLIVLDRNILEI DPHDIHRANVTMTMMNGQIRHET >Mature_583_residues MLRAAATVAAASAVSACSSPAQQSPAPAGSPGSANAHADFVFRNGAVYTVDGPAPWAQALAVRGDTIVHVGDEAGAMALA GPATRVVDLGGRLLMPGFVEGHTHPFLGAFLTSGVDLQVPTLADALSAIEAYAKDNPTGPVRGFGWRVDMFGPDGPDRAE LDRILPDRPAFFFAIDGHSLWANSTALEMAGVKRDTPDPIPGFSYYARDTNGDPTGYILEVNAVLGLVDAVEPISPDTMG TLMEGWLPKASAAGITSVFDAGVPPIGDDQAALLRLYADVEQRGALPFRVVASYSVRSAPVDGAVDALEAVREQVSGELV SVDVVKIVGDGTQGGYTAWLVEPYADKPDSTGGSPFTEEQWHQLIGAVDAAGYDVHVHACGERTARVALDAVERAIASNP RRDRRHAIAHLVFVEDSDNPRFGALGVTAQFSANWMSADPDTLENMGARYGSPRKDLLYRPQAVLRSGGRISLGTDWPAA GYFSTYKPLDSIQVGVTRQLIGQTDAPVLEPADQRLSVAEAIYANTLGAAHQLRLDHKVGSLEVGKLADLIVLDRNILEI DPHDIHRANVTMTMMNGQIRHET
Specific function: Involved in the control of extracellular enzymes production. Stimulates PEL, PEH, CEL, and PRT production [H]
COG id: COG1574
COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013108 - InterPro: IPR011059 [H]
Pfam domain/function: PF07969 Amidohydro_3 [H]
EC number: NA
Molecular weight: Translated: 61736; Mature: 61736
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRAAATVAAASAVSACSSPAQQSPAPAGSPGSANAHADFVFRNGAVYTVDGPAPWAQAL CCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCHHHHHH AVRGDTIVHVGDEAGAMALAGPATRVVDLGGRLLMPGFVEGHTHPFLGAFLTSGVDLQVP HCCCCEEEEECCCCCCEEECCCCHHEECCCCCEECCCCCCCCCCHHHHHHHHCCCCEECC TLADALSAIEAYAKDNPTGPVRGFGWRVDMFGPDGPDRAELDRILPDRPAFFFAIDGHSL HHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEEEECCCEE WANSTALEMAGVKRDTPDPIPGFSYYARDTNGDPTGYILEVNAVLGLVDAVEPISPDTMG ECCCCHHEECCCCCCCCCCCCCCEEEEECCCCCCCEEEEEHHHHHHHHHHCCCCCCCHHH TLMEGWLPKASAAGITSVFDAGVPPIGDDQAALLRLYADVEQRGALPFRVVASYSVRSAP HHHHCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC VDGAVDALEAVREQVSGELVSVDVVKIVGDGTQGGYTAWLVEPYADKPDSTGGSPFTEEQ CCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCHHH WHQLIGAVDAAGYDVHVHACGERTARVALDAVERAIASNPRRDRRHAIAHLVFVEDSDNP HHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHEEEEEEEEEECCCCC RFGALGVTAQFSANWMSADPDTLENMGARYGSPRKDLLYRPQAVLRSGGRISLGTDWPAA CEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHCCCHHHHHCCCEEEECCCCCCC GYFSTYKPLDSIQVGVTRQLIGQTDAPVLEPADQRLSVAEAIYANTLGAAHQLRLDHKVG CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHEEEECCCCC SLEVGKLADLIVLDRNILEIDPHDIHRANVTMTMMNGQIRHET CEEHHHHHEEEEECCCEEEECCCCCEECEEEEEEECCEEECCC >Mature Secondary Structure MLRAAATVAAASAVSACSSPAQQSPAPAGSPGSANAHADFVFRNGAVYTVDGPAPWAQAL CCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCHHHHHH AVRGDTIVHVGDEAGAMALAGPATRVVDLGGRLLMPGFVEGHTHPFLGAFLTSGVDLQVP HCCCCEEEEECCCCCCEEECCCCHHEECCCCCEECCCCCCCCCCHHHHHHHHCCCCEECC TLADALSAIEAYAKDNPTGPVRGFGWRVDMFGPDGPDRAELDRILPDRPAFFFAIDGHSL HHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEEEECCCEE WANSTALEMAGVKRDTPDPIPGFSYYARDTNGDPTGYILEVNAVLGLVDAVEPISPDTMG ECCCCHHEECCCCCCCCCCCCCCEEEEECCCCCCCEEEEEHHHHHHHHHHCCCCCCCHHH TLMEGWLPKASAAGITSVFDAGVPPIGDDQAALLRLYADVEQRGALPFRVVASYSVRSAP HHHHCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC VDGAVDALEAVREQVSGELVSVDVVKIVGDGTQGGYTAWLVEPYADKPDSTGGSPFTEEQ CCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCHHH WHQLIGAVDAAGYDVHVHACGERTARVALDAVERAIASNPRRDRRHAIAHLVFVEDSDNP HHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHEEEEEEEEEECCCCC RFGALGVTAQFSANWMSADPDTLENMGARYGSPRKDLLYRPQAVLRSGGRISLGTDWPAA CEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHCCCHHHHHCCCEEEECCCCCCC GYFSTYKPLDSIQVGVTRQLIGQTDAPVLEPADQRLSVAEAIYANTLGAAHQLRLDHKVG CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHEEEECCCCC SLEVGKLADLIVLDRNILEIDPHDIHRANVTMTMMNGQIRHET CEEHHHHHEEEEECCCEEEECCCCCEECEEEEEEECCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8324248; 7944360 [H]