| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119869411
Identifier: 119869411
GI number: 119869411
Start: 3542850
End: 3543602
Strand: Direct
Name: 119869411
Synonym: Mkms_3379
Alternate gene names: NA
Gene position: 3542850-3543602 (Clockwise)
Preceding gene: 119869410
Following gene: 119869412
Centisome position: 61.75
GC content: 69.99
Gene sequence:
>753_bases ATGGCCAAGACCCGCAACACCGCCGCCACCAAGGCCGCCAAGGCCGAGGCGAAGGCCGCCCGCAAGGCCGCGTCCAAGCA GCGGCGCAGTCAGCTCTGGCAGGCGTTCCAGATCCAGCGCAAAGAGGACAAGCGGCTGCTGCCGTACATGATCGGCGCGT TCGTCCTGATCGTCGGGGCGGCGGTCGCGGTCGGTGTCCTCGCCGGCGGGTTCACGATGTACACGCTGATCCCGCTGGGC ATCGTGCTCGGCGCGCTGGTCGCGTTCATCATCTTCGGCCGGCGGGCGCAGAAGTCGGTGTACCGCAAGGCCGAGGGCCA GACCGGGGCGGCCGCATGGGCGCTGGACAACCTGCGCGGCAAGTGGCGCGTCACACCGGGTGTGGCGGCGACGGGCCACT TCGACGCGGTGCACCGGGTGATCGGCCGTCCGGGTGTGATCTTCGTCGGCGAGGGTAACCCCGGCCGGGTCAAGCCGCTA CTCGCCCAGGAGAAGAAGCGCACCGCGCGCCTCATCGGCGACACCCCGATCTACGACGTGATCGTCGGCAACGGCGAGGG TGAGGTGCCGCTGTCCAAGCTGGAGCGCCACCTCAACAAGCTGCCCGCCAACATCACCGTCAAGCAGATGGACTCGCTCG AGTCGCGACTGGCCGCACTGGGCACCAAACTCGGTCCGGCCGCGATGCCGAAGGGTCCGATGCCCGCGCAGGCCAAGATG CGCGGGGTCCAGCGCACCGTGCGCCGGCGCTAG
Upstream 100 bases:
>100_bases CTGTCCGGTCCGCTGGTGCGGTCGTCGTACCGGGCGGGGCGGCTGTACGCGCAGGCCGCGCGGCTGAAACCGGCCGCGAC GCCACCCGTATCCTGAGGGT
Downstream 100 bases:
>100_bases CGGCGCGCCGCAGTCCCGGGCCGGTGGTCACCGGCCATACTTCCGCGGGTGTGTACTGCGTGCGAGTGGGCGCCCCATTT CCTGTCGTTCGGTGGCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MAKTRNTAATKAAKAEAKAARKAASKQRRSQLWQAFQIQRKEDKRLLPYMIGAFVLIVGAAVAVGVLAGGFTMYTLIPLG IVLGALVAFIIFGRRAQKSVYRKAEGQTGAAAWALDNLRGKWRVTPGVAATGHFDAVHRVIGRPGVIFVGEGNPGRVKPL LAQEKKRTARLIGDTPIYDVIVGNGEGEVPLSKLERHLNKLPANITVKQMDSLESRLAALGTKLGPAAMPKGPMPAQAKM RGVQRTVRRR
Sequences:
>Translated_250_residues MAKTRNTAATKAAKAEAKAARKAASKQRRSQLWQAFQIQRKEDKRLLPYMIGAFVLIVGAAVAVGVLAGGFTMYTLIPLG IVLGALVAFIIFGRRAQKSVYRKAEGQTGAAAWALDNLRGKWRVTPGVAATGHFDAVHRVIGRPGVIFVGEGNPGRVKPL LAQEKKRTARLIGDTPIYDVIVGNGEGEVPLSKLERHLNKLPANITVKQMDSLESRLAALGTKLGPAAMPKGPMPAQAKM RGVQRTVRRR >Mature_249_residues AKTRNTAATKAAKAEAKAARKAASKQRRSQLWQAFQIQRKEDKRLLPYMIGAFVLIVGAAVAVGVLAGGFTMYTLIPLGI VLGALVAFIIFGRRAQKSVYRKAEGQTGAAAWALDNLRGKWRVTPGVAATGHFDAVHRVIGRPGVIFVGEGNPGRVKPLL AQEKKRTARLIGDTPIYDVIVGNGEGEVPLSKLERHLNKLPANITVKQMDSLESRLAALGTKLGPAAMPKGPMPAQAKMR GVQRTVRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021315 [H]
Pfam domain/function: PF11139 DUF2910 [H]
EC number: NA
Molecular weight: Translated: 26947; Mature: 26816
Theoretical pI: Translated: 11.89; Mature: 11.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTRNTAATKAAKAEAKAARKAASKQRRSQLWQAFQIQRKEDKRLLPYMIGAFVLIVGA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH AVAVGVLAGGFTMYTLIPLGIVLGALVAFIIFGRRAQKSVYRKAEGQTGAAAWALDNLRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHCCCC KWRVTPGVAATGHFDAVHRVIGRPGVIFVGEGNPGRVKPLLAQEKKRTARLIGDTPIYDV CEEECCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEE IVGNGEGEVPLSKLERHLNKLPANITVKQMDSLESRLAALGTKLGPAAMPKGPMPAQAKM EEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH RGVQRTVRRR HHHHHHHHCC >Mature Secondary Structure AKTRNTAATKAAKAEAKAARKAASKQRRSQLWQAFQIQRKEDKRLLPYMIGAFVLIVGA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH AVAVGVLAGGFTMYTLIPLGIVLGALVAFIIFGRRAQKSVYRKAEGQTGAAAWALDNLRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHCCCC KWRVTPGVAATGHFDAVHRVIGRPGVIFVGEGNPGRVKPLLAQEKKRTARLIGDTPIYDV CEEECCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEE IVGNGEGEVPLSKLERHLNKLPANITVKQMDSLESRLAALGTKLGPAAMPKGPMPAQAKM EEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH RGVQRTVRRR HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]