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The map label for this gene is qcrC [H]

Identifier: 119869386

GI number: 119869386

Start: 3517336

End: 3518154

Strand: Direct

Name: qcrC [H]

Synonym: Mkms_3354

Alternate gene names: 119869386

Gene position: 3517336-3518154 (Clockwise)

Preceding gene: 119869385

Following gene: 119869387

Centisome position: 61.31

GC content: 69.96

Gene sequence:

>819_bases
ATGAGAAGGGGTTCGATGATCAGCAAGTCCCGCCGACGGTTCCGCCGGCGCCTGTCGGCAGCGGTGCTGCTGCTGGTCGG
ACTTGGTGTCGCGGGCGGCGTCGCCGCCACGCTGACGCCCGCACCGCAGGTGGCGGTGGCCGACGAGTCGCAGTCGGCCC
TGCTGCGCACCGGCAAGGAGCTCTACGACATGTCCTGCGTGAGCTGCCACGGCAGCAATCTGCAGGGTGTGCAGGACCGC
GGACCCAGCCTGATCGGTGTCGGCGAGGCGGCGGTGTACTTCCAGGTCTCCACCGGCCGCATGCCCGCGCGCCGCAACGA
GGCCCAGGCGCCGAACAAGCCGGCCGACTTCGACGAGGCGCAGACCGATGCACTCGGCGCCTACGTGCAGGCCAACGGCG
GCGGACCCGTCGTCCCGCGCGACGAGAACGGCGAGATCGCCAACCAGTCGCTGATCGGCGACAACGTCGCCCGCGGTGGC
GACCTGTTCCGGCTCAACTGCGCGTCGTGCCACAACTTCACCGGACGCGGCGGCGCCCTGTCCTCGGGTAAGTACGCGCC
CGAACTCCAGGCGTCCCCCGCGCAGGTCTACACCGCGATGCAGACCGGTCCGCAGAACATGCCCAAGTTCTCCGACCGTC
AGCTGTCGCCGGAGGAGAAGCGCGACATCGTCGCCTACGTCGAGGAGTCGCGGAAGACGCCGCCTCCCGGCGGTTACGGA
CTCGGCGGCTTCGGCCCGACGTCCGAAGGTATGGCGGCGTGGATCATCGGCATGGTGGCCGTCATCGGTGCGGCTCTCTG
GATCGGGGCACGGGCATGA

Upstream 100 bases:

>100_bases
GGCACTTCGTCGACATCGTGTGGATCGCGCTGTTCGCCGTCATCTACTTCGTCCGATGATCGGCTCGATGCCTCCGATGA
GTTCACAGGGTCCTCAGCCG

Downstream 100 bases:

>100_bases
GCGACGAGCGGAACGAAGAGCAGGTGACGAACACTCCGGACGGCGCCCCCAAGGGCACCGACGCACCCGGCCACGGCGGT
GTGCCGGGTCAGCCGACCGA

Product: cytochrome c, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MRRGSMISKSRRRFRRRLSAAVLLLVGLGVAGGVAATLTPAPQVAVADESQSALLRTGKELYDMSCVSCHGSNLQGVQDR
GPSLIGVGEAAVYFQVSTGRMPARRNEAQAPNKPADFDEAQTDALGAYVQANGGGPVVPRDENGEIANQSLIGDNVARGG
DLFRLNCASCHNFTGRGGALSSGKYAPELQASPAQVYTAMQTGPQNMPKFSDRQLSPEEKRDIVAYVEESRKTPPPGGYG
LGGFGPTSEGMAAWIIGMVAVIGAALWIGARA

Sequences:

>Translated_272_residues
MRRGSMISKSRRRFRRRLSAAVLLLVGLGVAGGVAATLTPAPQVAVADESQSALLRTGKELYDMSCVSCHGSNLQGVQDR
GPSLIGVGEAAVYFQVSTGRMPARRNEAQAPNKPADFDEAQTDALGAYVQANGGGPVVPRDENGEIANQSLIGDNVARGG
DLFRLNCASCHNFTGRGGALSSGKYAPELQASPAQVYTAMQTGPQNMPKFSDRQLSPEEKRDIVAYVEESRKTPPPGGYG
LGGFGPTSEGMAAWIIGMVAVIGAALWIGARA
>Mature_272_residues
MRRGSMISKSRRRFRRRLSAAVLLLVGLGVAGGVAATLTPAPQVAVADESQSALLRTGKELYDMSCVSCHGSNLQGVQDR
GPSLIGVGEAAVYFQVSTGRMPARRNEAQAPNKPADFDEAQTDALGAYVQANGGGPVVPRDENGEIANQSLIGDNVARGG
DLFRLNCASCHNFTGRGGALSSGKYAPELQASPAQVYTAMQTGPQNMPKFSDRQLSPEEKRDIVAYVEESRKTPPPGGYG
LGGFGPTSEGMAAWIIGMVAVIGAALWIGARA

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR009152 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 28509; Mature: 28509

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRGSMISKSRRRFRRRLSAAVLLLVGLGVAGGVAATLTPAPQVAVADESQSALLRTGKE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCHHHHHHCCHH
LYDMSCVSCHGSNLQGVQDRGPSLIGVGEAAVYFQVSTGRMPARRNEAQAPNKPADFDEA
HHHHHHEEECCCCCCCHHHCCCCEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHH
QTDALGAYVQANGGGPVVPRDENGEIANQSLIGDNVARGGDLFRLNCASCHNFTGRGGAL
HHHHHEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCC
SSGKYAPELQASPAQVYTAMQTGPQNMPKFSDRQLSPEEKRDIVAYVEESRKTPPPGGYG
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
LGGFGPTSEGMAAWIIGMVAVIGAALWIGARA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRRGSMISKSRRRFRRRLSAAVLLLVGLGVAGGVAATLTPAPQVAVADESQSALLRTGKE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCHHHHHHCCHH
LYDMSCVSCHGSNLQGVQDRGPSLIGVGEAAVYFQVSTGRMPARRNEAQAPNKPADFDEA
HHHHHHEEECCCCCCCHHHCCCCEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHH
QTDALGAYVQANGGGPVVPRDENGEIANQSLIGDNVARGGDLFRLNCASCHNFTGRGGAL
HHHHHEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCC
SSGKYAPELQASPAQVYTAMQTGPQNMPKFSDRQLSPEEKRDIVAYVEESRKTPPPGGYG
CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
LGGFGPTSEGMAAWIIGMVAVIGAALWIGARA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]