| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
Click here to switch to the map view.
The map label for this gene is 119869362
Identifier: 119869362
GI number: 119869362
Start: 3493277
End: 3493981
Strand: Direct
Name: 119869362
Synonym: Mkms_3330
Alternate gene names: NA
Gene position: 3493277-3493981 (Clockwise)
Preceding gene: 119869361
Following gene: 119869363
Centisome position: 60.89
GC content: 69.5
Gene sequence:
>705_bases ATGACCTCCGTGCTCGCCCGCCGACAACGTACCCGCCTGGTGGCCTGGGTATTGCTGCTGCTGATGCTGCCCATGGTGGT GGGCTGTGTGCGGGTCCGGGCCTCGATCACCGTGTCCCCCGACGACCGGGTGTCCGGCCAGATCGTCGCGGCGGCCAAAC CGCGCGGACCGGACGACAAGGGTCCGCAGCTGCTCAACAACCTGCCCTTCGCCACCAAGGTCGCGGTCTCGGACTACAAC CGCGACGACTACGTGGGCACCCAGGCGGTGTTCTCCGACCTCACCTTCGCCGAACTGCCGCAGCTGGCCAACATGAACCG CGACGCCGCGGGCGTCGACATCTCGCTGCGCCGCGCCGGTGACCTGGTGATCCTGGAAGGCCGCGTCGACCTGACCTCGG TGAGCGATCCGGAGGCCGACGTGTCGCTGTCGGTGGCGTTCCCCGGTGAGGTCACCTCGACCAACGGCGACCAGGTCAGC ACCGAGGTCGTGGAGTGGAAGCTCAATCCGGGCGTGGTGTCGACCCTCAACGCCCAGGCGCGCTACACCGACCCCAGCGC GCGGTCGTTCACCACCGCCGCCATCTGGCTGACGGTGGCCACGCTCGTGGTGGCCGCGATCATCGGCGGTCTGGCCTGGA GCAGCCGGGACCGTTCCCCCACCCTCGCCGACCCCAACCCGAACGACGAAAGGGGCACCCGCTGA
Upstream 100 bases:
>100_bases ACGTCATCCGCGGCTACCACTTCGCCGGCGACCCGCGGGCGTTCGCGATCCTGGGCCGCGCACTGCCGCTGTAGACCGGC ATCTGGCACGATGACCCCCG
Downstream 100 bases:
>100_bases GCGTGGATGCCGCGGCTCCGTCAGCCGCCGAGTTGGCCGGAGCCGTCACCGAGCAGTTGCGGGACTACCTGTCCGCGCGC CGGCGCGATGCCGCCTACAT
Product: protein LppM
Products: NA
Alternate protein names: Lipoprotein LppM; LppM Protein
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MTSVLARRQRTRLVAWVLLLLMLPMVVGCVRVRASITVSPDDRVSGQIVAAAKPRGPDDKGPQLLNNLPFATKVAVSDYN RDDYVGTQAVFSDLTFAELPQLANMNRDAAGVDISLRRAGDLVILEGRVDLTSVSDPEADVSLSVAFPGEVTSTNGDQVS TEVVEWKLNPGVVSTLNAQARYTDPSARSFTTAAIWLTVATLVVAAIIGGLAWSSRDRSPTLADPNPNDERGTR
Sequences:
>Translated_234_residues MTSVLARRQRTRLVAWVLLLLMLPMVVGCVRVRASITVSPDDRVSGQIVAAAKPRGPDDKGPQLLNNLPFATKVAVSDYN RDDYVGTQAVFSDLTFAELPQLANMNRDAAGVDISLRRAGDLVILEGRVDLTSVSDPEADVSLSVAFPGEVTSTNGDQVS TEVVEWKLNPGVVSTLNAQARYTDPSARSFTTAAIWLTVATLVVAAIIGGLAWSSRDRSPTLADPNPNDERGTR >Mature_233_residues TSVLARRQRTRLVAWVLLLLMLPMVVGCVRVRASITVSPDDRVSGQIVAAAKPRGPDDKGPQLLNNLPFATKVAVSDYNR DDYVGTQAVFSDLTFAELPQLANMNRDAAGVDISLRRAGDLVILEGRVDLTSVSDPEADVSLSVAFPGEVTSTNGDQVST EVVEWKLNPGVVSTLNAQARYTDPSARSFTTAAIWLTVATLVVAAIIGGLAWSSRDRSPTLADPNPNDERGTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25089; Mature: 24957
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVLARRQRTRLVAWVLLLLMLPMVVGCVRVRASITVSPDDRVSGQIVAAAKPRGPDDK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEECCCCCCCC GPQLLNNLPFATKVAVSDYNRDDYVGTQAVFSDLTFAELPQLANMNRDAAGVDISLRRAG CHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEECCC DLVILEGRVDLTSVSDPEADVSLSVAFPGEVTSTNGDQVSTEVVEWKLNPGVVSTLNAQA CEEEEECCCEECCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCE RYTDPSARSFTTAAIWLTVATLVVAAIIGGLAWSSRDRSPTLADPNPNDERGTR EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TSVLARRQRTRLVAWVLLLLMLPMVVGCVRVRASITVSPDDRVSGQIVAAAKPRGPDDK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEECCCCCCCC GPQLLNNLPFATKVAVSDYNRDDYVGTQAVFSDLTFAELPQLANMNRDAAGVDISLRRAG CHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEECCC DLVILEGRVDLTSVSDPEADVSLSVAFPGEVTSTNGDQVSTEVVEWKLNPGVVSTLNAQA CEEEEECCCEECCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCE RYTDPSARSFTTAAIWLTVATLVVAAIIGGLAWSSRDRSPTLADPNPNDERGTR EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA