| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119869273
Identifier: 119869273
GI number: 119869273
Start: 3399274
End: 3399582
Strand: Reverse
Name: 119869273
Synonym: Mkms_3241
Alternate gene names: NA
Gene position: 3399582-3399274 (Counterclockwise)
Preceding gene: 119869275
Following gene: 119869272
Centisome position: 59.25
GC content: 61.49
Gene sequence:
>309_bases GTGCCTAGGCCCTACCCCCGTGAATTTCGCGACGACGTCGTCCGCGTTGCCCGTAACCGCGACGACGGGGTGACGATCGA GCAGATCGCCACCGATTTCGGCGTGCACCCGATGACGTTGACCAAGTGGATGCGCCAAGCCGACGTCGACGAGGGCGCCA AGCCAGGTAAGAGCACCAATGACTCCGCTGATCTGCGCGAGCTACGACGCCGAAATCGGTTGTTGGAACAAGAGAATGAA GTCTTACGGCGGGCAGCGGCGTACTTGTCGCAGGCCAATCTGCCGGGAAAAGGGTCTACCCGCTCGTAA
Upstream 100 bases:
>100_bases TGCGACGCTACCCGCCAGCCCACGATCATCGGGTCTGCTGCACCAATAGGTGACATCTGAGTTGGCTTGCCCAAAGCGGG CGGGCTGGAAGGATGTCAGT
Downstream 100 bases:
>100_bases GTGAGCTCGCCGCCGACGGGATTCCCGTCGCGGTGACGCGCCGGGTACTCAAGCTCGCCCGCCAGCCCTACTACCGCTGG CGGGCAAATCCCATCACCAA
Product: transposase IS3/IS911 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MPRPYPREFRDDVVRVARNRDDGVTIEQIATDFGVHPMTLTKWMRQADVDEGAKPGKSTNDSADLRELRRRNRLLEQENE VLRRAAAYLSQANLPGKGSTRS
Sequences:
>Translated_102_residues MPRPYPREFRDDVVRVARNRDDGVTIEQIATDFGVHPMTLTKWMRQADVDEGAKPGKSTNDSADLRELRRRNRLLEQENE VLRRAAAYLSQANLPGKGSTRS >Mature_101_residues PRPYPREFRDDVVRVARNRDDGVTIEQIATDFGVHPMTLTKWMRQADVDEGAKPGKSTNDSADLRELRRRNRLLEQENEV LRRAAAYLSQANLPGKGSTRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 11666; Mature: 11535
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRPYPREFRDDVVRVARNRDDGVTIEQIATDFGVHPMTLTKWMRQADVDEGAKPGKSTN CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCC DSADLRELRRRNRLLEQENEVLRRAAAYLSQANLPGKGSTRS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PRPYPREFRDDVVRVARNRDDGVTIEQIATDFGVHPMTLTKWMRQADVDEGAKPGKSTN CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCC DSADLRELRRRNRLLEQENEVLRRAAAYLSQANLPGKGSTRS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]