| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is treZ [H]
Identifier: 119869174
GI number: 119869174
Start: 3288231
End: 3289973
Strand: Direct
Name: treZ [H]
Synonym: Mkms_3142
Alternate gene names: 119869174
Gene position: 3288231-3289973 (Clockwise)
Preceding gene: 119869173
Following gene: 119869177
Centisome position: 57.31
GC content: 69.19
Gene sequence:
>1743_bases ATGCCTGAATTCGCGGTGTGGGCTCCGCTGCCGGAGCGTGTCCGACTCGACGTCGAGGGGTCGCTGCACCCGATGACGTG CGGTGACGACGGGTGGTGGCGCATCGAGGTCGACGCCGCACCGGATGCCCGGTACGGCTTCGTCCTCGACGACGATCCGA AGGTGCTGCCCGATCCCCGCTCGCCGCGCCAACCCGACGGCGTGCACGAGCGTTCCCAGTTGTGGCAGCCGGCGCCCGAC GCGTGGACCGACGGTGCGTGGGCGGGCCGCAAGATCGAGGGGTCCGAAAAAGGTCAGGTGATCTACGAACTGCACACCGG CACCTTCACCCCGGAGGGCACGTTCGACGCCGCCATCGGCAAACTCGACCACCTGGTCGACCTCGGTGTCGACTTCGTCG AATTGATGCCGGTCAACGCATTCGGCGGCACCCACGGCTGGGGATACGACGGGGTGCTGTGGTACGCCGTGCACGAACCG TACGGCGGCCCCGACGCGCTGATCCGGCTGATCGACGCGTGCCATTCCCGCGGGCTCGGCGTGCTCATCGACGCGGTGTT CAACCACCTCGGCCCGTCGGGCAACTACCTGCCGAAGTTCGGCCCGTACCTGTCGTCGGGCAGCAATCCGTGGGGCGAGT CGATCAACATCGCCGACGCCGGGGCGGACGAGGTGCGCCGCTACATCCTGGACTGCGCGCTGCGGTGGATGCGCGACTTC CACGCCGACGGGCTGCGACTCGACGCGGTGCACGCCCTGGTCGACACCACCGCGATCCACATCCTCGAGGAGCTGTCCGC CGAAACCGACGCGCTGGCAGACGAACTCGGCCGGCCGCTCTCGCTGATCGCCGAGAGCGACATGAACGATCCCCGGTTGA TCACCCCGCGCGATCAGGGCGGTCTGGGCATGACCGCGCAGTGGGACGACGACATCCACCACGCGATCCACGCCGCGGTG TCGGGTGAGACGCAGGGCTACTACGGCGACTGGGGCACCGTCGAGGCGTTGGCGCAGACGCTGCGCAACGGTTACTTCCA CGCCGGGACGTTCTCGTCGTTCCGGAACCGCCGCCACGGCCGCCCGCTGGACACCGCCACCATCCCGGCCACCCGCCTGC TGGCCTACACCCTGACCCACGACCAGGTCGGCAACCGGGCCGTCGGCGACCGGCCGTCACAGAACCTCGACACCGGCCAG CTCGCGGTCAAGGCCGCGCTTGCGCTCGGATCTCCGTACACCGCAATGCTCTTCATGGGCGAGGAGTGGGGCTCGTCGTC GCCGTTCCAGTTCTTCAGCAGCCATCCGGAGCCGGAGCTGGCCCGGGCGACCGCCGAGGGACGCAAGAGGGAATTCGCCG AACACGGGTGGGACGCCGACGAGATCCCCGATCCGCAGGATCCGCAGACCTTCCTGCGGTCGAAGCTCAAGTGGGATGAG ATCGACGACGGCGACCACGGCCGCCTGCGCGCGCTCTACCGGGAGCTGATCGCGTTGCGGCACAACGAACCTGACCTCGC CGACCCGTGGCTCGACCACCTACGGATCGACTACGACGAGGCGCAGCGGTGGATCGTGATGCACCGCGGCAGCCTGTCCA TCGCGTGCAACCTCGGCGCCGACGCGGTGACCGTGCCGGTCACCGGTGACGTCGTGCTCGCCTGGGGGGAACCGGCGCCC GAGGGTGACGGGATGAGCCTGGCGGGTCACTCGTTCGCCGTCGTGCGGACTCAGAGCAGGTAG
Upstream 100 bases:
>100_bases GGCAACTGGACCGACCGCATCACCGGCGGCCGGTTCACCGGCACCGTGACCGCGGCCGATCTGTTCGCCGAACTGCCCGC CGTGCTGCTGGAGCGTGACC
Downstream 100 bases:
>100_bases CGGTAGGCCGGCGAATCCGGTTCCAGCGCCTCGACGTGCATGTCGGAGGAGCGCATCCGGGTGAGCAGACCGTCGAAGTC GGCGGCCGAGCCGAGTTCGA
Product: malto-oligosyltrehalose trehalohydrolase
Products: NA
Alternate protein names: MTHase; 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase; Maltooligosyl trehalose trehalohydrolase [H]
Number of amino acids: Translated: 580; Mature: 579
Protein sequence:
>580_residues MPEFAVWAPLPERVRLDVEGSLHPMTCGDDGWWRIEVDAAPDARYGFVLDDDPKVLPDPRSPRQPDGVHERSQLWQPAPD AWTDGAWAGRKIEGSEKGQVIYELHTGTFTPEGTFDAAIGKLDHLVDLGVDFVELMPVNAFGGTHGWGYDGVLWYAVHEP YGGPDALIRLIDACHSRGLGVLIDAVFNHLGPSGNYLPKFGPYLSSGSNPWGESINIADAGADEVRRYILDCALRWMRDF HADGLRLDAVHALVDTTAIHILEELSAETDALADELGRPLSLIAESDMNDPRLITPRDQGGLGMTAQWDDDIHHAIHAAV SGETQGYYGDWGTVEALAQTLRNGYFHAGTFSSFRNRRHGRPLDTATIPATRLLAYTLTHDQVGNRAVGDRPSQNLDTGQ LAVKAALALGSPYTAMLFMGEEWGSSSPFQFFSSHPEPELARATAEGRKREFAEHGWDADEIPDPQDPQTFLRSKLKWDE IDDGDHGRLRALYRELIALRHNEPDLADPWLDHLRIDYDEAQRWIVMHRGSLSIACNLGADAVTVPVTGDVVLAWGEPAP EGDGMSLAGHSFAVVRTQSR
Sequences:
>Translated_580_residues MPEFAVWAPLPERVRLDVEGSLHPMTCGDDGWWRIEVDAAPDARYGFVLDDDPKVLPDPRSPRQPDGVHERSQLWQPAPD AWTDGAWAGRKIEGSEKGQVIYELHTGTFTPEGTFDAAIGKLDHLVDLGVDFVELMPVNAFGGTHGWGYDGVLWYAVHEP YGGPDALIRLIDACHSRGLGVLIDAVFNHLGPSGNYLPKFGPYLSSGSNPWGESINIADAGADEVRRYILDCALRWMRDF HADGLRLDAVHALVDTTAIHILEELSAETDALADELGRPLSLIAESDMNDPRLITPRDQGGLGMTAQWDDDIHHAIHAAV SGETQGYYGDWGTVEALAQTLRNGYFHAGTFSSFRNRRHGRPLDTATIPATRLLAYTLTHDQVGNRAVGDRPSQNLDTGQ LAVKAALALGSPYTAMLFMGEEWGSSSPFQFFSSHPEPELARATAEGRKREFAEHGWDADEIPDPQDPQTFLRSKLKWDE IDDGDHGRLRALYRELIALRHNEPDLADPWLDHLRIDYDEAQRWIVMHRGSLSIACNLGADAVTVPVTGDVVLAWGEPAP EGDGMSLAGHSFAVVRTQSR >Mature_579_residues PEFAVWAPLPERVRLDVEGSLHPMTCGDDGWWRIEVDAAPDARYGFVLDDDPKVLPDPRSPRQPDGVHERSQLWQPAPDA WTDGAWAGRKIEGSEKGQVIYELHTGTFTPEGTFDAAIGKLDHLVDLGVDFVELMPVNAFGGTHGWGYDGVLWYAVHEPY GGPDALIRLIDACHSRGLGVLIDAVFNHLGPSGNYLPKFGPYLSSGSNPWGESINIADAGADEVRRYILDCALRWMRDFH ADGLRLDAVHALVDTTAIHILEELSAETDALADELGRPLSLIAESDMNDPRLITPRDQGGLGMTAQWDDDIHHAIHAAVS GETQGYYGDWGTVEALAQTLRNGYFHAGTFSSFRNRRHGRPLDTATIPATRLLAYTLTHDQVGNRAVGDRPSQNLDTGQL AVKAALALGSPYTAMLFMGEEWGSSSPFQFFSSHPEPELARATAEGRKREFAEHGWDADEIPDPQDPQTFLRSKLKWDEI DDGDHGRLRALYRELIALRHNEPDLADPWLDHLRIDYDEAQRWIVMHRGSLSIACNLGADAVTVPVTGDVVLAWGEPAPE GDGMSLAGHSFAVVRTQSR
Specific function: Catalyzes The Formation Of The Alpha-1,6-Glucosidic Linkages In Glycogen By Scission Of A 1,4-Alpha-Linked Oligosaccharide From Growing Alpha-1,4-Glucan Chains And The Subsequent Attachment Of The Oligosaccharide To The Alpha-1,6 Position. Has A Preferenc
COG id: COG0296
COG function: function code G; 1,4-alpha-glucan branching enzyme
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Escherichia coli, GI1789839, Length=352, Percent_Identity=25.5681818181818, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006047 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013783 - InterPro: IPR014756 - InterPro: IPR022567 - InterPro: IPR012768 [H]
Pfam domain/function: PF00128 Alpha-amylase; PF11941 DUF3459 [H]
EC number: =3.2.1.141 [H]
Molecular weight: Translated: 63918; Mature: 63786
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEFAVWAPLPERVRLDVEGSLHPMTCGDDGWWRIEVDAAPDARYGFVLDDDPKVLPDPR CCCCEEECCCCHHEEEEECCCCCCEECCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCC SPRQPDGVHERSQLWQPAPDAWTDGAWAGRKIEGSEKGQVIYELHTGTFTPEGTFDAAIG CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHH KLDHLVDLGVDFVELMPVNAFGGTHGWGYDGVLWYAVHEPYGGPDALIRLIDACHSRGLG HHHHHHHHCCCEEHEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCH VLIDAVFNHLGPSGNYLPKFGPYLSSGSNPWGESINIADAGADEVRRYILDCALRWMRDF HHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHH HADGLRLDAVHALVDTTAIHILEELSAETDALADELGRPLSLIAESDMNDPRLITPRDQG CCCCEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEHHHCCCCCCEEECCCCCC GLGMTAQWDDDIHHAIHAAVSGETQGYYGDWGTVEALAQTLRNGYFHAGTFSSFRNRRHG CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEECCCHHHHHHCCCC RPLDTATIPATRLLAYTLTHDQVGNRAVGDRPSQNLDTGQLAVKAALALGSPYTAMLFMG CCCCCCCCCHHHHEEEEECHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEE EEWGSSSPFQFFSSHPEPELARATAEGRKREFAEHGWDADEIPDPQDPQTFLRSKLKWDE CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCC IDDGDHGRLRALYRELIALRHNEPDLADPWLDHLRIDYDEAQRWIVMHRGSLSIACNLGA CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHCCEEEEEECCCEEEEEECCC DAVTVPVTGDVVLAWGEPAPEGDGMSLAGHSFAVVRTQSR CEEEEEECCCEEEEECCCCCCCCCCEECCCEEEEEEECCC >Mature Secondary Structure PEFAVWAPLPERVRLDVEGSLHPMTCGDDGWWRIEVDAAPDARYGFVLDDDPKVLPDPR CCCEEECCCCHHEEEEECCCCCCEECCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCC SPRQPDGVHERSQLWQPAPDAWTDGAWAGRKIEGSEKGQVIYELHTGTFTPEGTFDAAIG CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHH KLDHLVDLGVDFVELMPVNAFGGTHGWGYDGVLWYAVHEPYGGPDALIRLIDACHSRGLG HHHHHHHHCCCEEHEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCH VLIDAVFNHLGPSGNYLPKFGPYLSSGSNPWGESINIADAGADEVRRYILDCALRWMRDF HHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHH HADGLRLDAVHALVDTTAIHILEELSAETDALADELGRPLSLIAESDMNDPRLITPRDQG CCCCEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEHHHCCCCCCEEECCCCCC GLGMTAQWDDDIHHAIHAAVSGETQGYYGDWGTVEALAQTLRNGYFHAGTFSSFRNRRHG CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEECCCHHHHHHCCCC RPLDTATIPATRLLAYTLTHDQVGNRAVGDRPSQNLDTGQLAVKAALALGSPYTAMLFMG CCCCCCCCCHHHHEEEEECHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEE EEWGSSSPFQFFSSHPEPELARATAEGRKREFAEHGWDADEIPDPQDPQTFLRSKLKWDE CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCC IDDGDHGRLRALYRELIALRHNEPDLADPWLDHLRIDYDEAQRWIVMHRGSLSIACNLGA CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHCCEEEEEECCCEEEEEECCC DAVTVPVTGDVVLAWGEPAPEGDGMSLAGHSFAVVRTQSR CEEEEEECCCEEEEECCCCCCCCCCEECCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]