| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
Click here to switch to the map view.
The map label for this gene is 119869110
Identifier: 119869110
GI number: 119869110
Start: 3220271
End: 3221119
Strand: Direct
Name: 119869110
Synonym: Mkms_3078
Alternate gene names: NA
Gene position: 3220271-3221119 (Clockwise)
Preceding gene: 119869109
Following gene: 119869111
Centisome position: 56.13
GC content: 66.55
Gene sequence:
>849_bases GTGGCAACCGAAACCACCGCCGCCAATCCCGAACTGCTCCAAGAGCAGGTCGCCAACATCCTCGTACAACCGCTCGAAGC CGCCTCCGTCGTCCTCTCCAGCGGTGTGCGCATCTTCGACACTTCCGGCCCGCTGCGCATCCCCAAGCTGACCGCCGGCG CCAGCGTCGGGTTCGTCGCCGAAGGTGGCCTAATCCCCGAGGCCGACGTCGACTTCGGCGAAATCTCACTGATGCCCTCG ACTCTCAAGTCGCTTAAGGTGCTCATCCGGTTCACCAACGAACTGCTGCGCCAGTCCGTCATCGGCCTCGACGCCACCCT GCGGCAGCGCCTCGTCACCGACGTATCCAACGCCCTCGACACCGCCCTGCTCACCGGGGCCGGCACCAGCAACACCATCA CCGGCCTCATCAACCAGACCGGCGTGCAGACCGGCGAACTCGACGTCGCCGACGCCGACAGCCTGCTCGACGCCATCGCG CTCGCCTCGGCAGCCGAAGTCACACCGAACCGGTGGTTCATCAACGGCGCTGACTTCATCGCCCTGCGCAAACTCAAAGA GGCACCGACCGGGTCGAGTAAATATCTCCTGGAGTCCGACGTCACCGCCGGCCCCACCTACCGGCTGTTCGGCATCCCCG TCACCGTCACCAACAAGCTCGCCGAAGGCAAGGCGGTCCTGGCCGACACCACACAGATCGCCGTCGCCCGCGACCTCGCC CCATCGGTGAAGCTGCTCGACCAGCGGTACGCCGAATACGACGAACAGGCCATCCGCGTCGTCACCCGCTACGACCTCGG CCTGCTCCACCCCGAGGCCGTCGTCGTCCTCACCGCAGCGGCCCCGTAG
Upstream 100 bases:
>100_bases CCCACCTGGGGTATCGTGAAGGGGTCGCGCCTGGTGCGCGGCCCCTTCTCCGTCCTGACGACGTGGGTACCGAATCCACT GCAATCGTTAGGACTTCACC
Downstream 100 bases:
>100_bases TGGCGGTCCAAGCTGACCAGGTGGCGGCGTTCCTCGGCAGACCCGAGGACGCCGCCATCCTGGCAACCGCCGAGCAAGCC ATCCCCATCGTCACCACGAT
Product: phage major capsid protein, HK97
Products: NA
Alternate protein names: Capsid Protein HK; Phage Capsid Protein HK; Phage Capsid Protein; Phage-Related Protein
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MATETTAANPELLQEQVANILVQPLEAASVVLSSGVRIFDTSGPLRIPKLTAGASVGFVAEGGLIPEADVDFGEISLMPS TLKSLKVLIRFTNELLRQSVIGLDATLRQRLVTDVSNALDTALLTGAGTSNTITGLINQTGVQTGELDVADADSLLDAIA LASAAEVTPNRWFINGADFIALRKLKEAPTGSSKYLLESDVTAGPTYRLFGIPVTVTNKLAEGKAVLADTTQIAVARDLA PSVKLLDQRYAEYDEQAIRVVTRYDLGLLHPEAVVVLTAAAP
Sequences:
>Translated_282_residues MATETTAANPELLQEQVANILVQPLEAASVVLSSGVRIFDTSGPLRIPKLTAGASVGFVAEGGLIPEADVDFGEISLMPS TLKSLKVLIRFTNELLRQSVIGLDATLRQRLVTDVSNALDTALLTGAGTSNTITGLINQTGVQTGELDVADADSLLDAIA LASAAEVTPNRWFINGADFIALRKLKEAPTGSSKYLLESDVTAGPTYRLFGIPVTVTNKLAEGKAVLADTTQIAVARDLA PSVKLLDQRYAEYDEQAIRVVTRYDLGLLHPEAVVVLTAAAP >Mature_281_residues ATETTAANPELLQEQVANILVQPLEAASVVLSSGVRIFDTSGPLRIPKLTAGASVGFVAEGGLIPEADVDFGEISLMPST LKSLKVLIRFTNELLRQSVIGLDATLRQRLVTDVSNALDTALLTGAGTSNTITGLINQTGVQTGELDVADADSLLDAIAL ASAAEVTPNRWFINGADFIALRKLKEAPTGSSKYLLESDVTAGPTYRLFGIPVTVTNKLAEGKAVLADTTQIAVARDLAP SVKLLDQRYAEYDEQAIRVVTRYDLGLLHPEAVVVLTAAAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29738; Mature: 29607
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATETTAANPELLQEQVANILVQPLEAASVVLSSGVRIFDTSGPLRIPKLTAGASVGFVA CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCEECCEECCCCCCCEEE EGGLIPEADVDFGEISLMPSTLKSLKVLIRFTNELLRQSVIGLDATLRQRLVTDVSNALD CCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH TALLTGAGTSNTITGLINQTGVQTGELDVADADSLLDAIALASAAEVTPNRWFINGADFI HHHHCCCCCCCCEEEHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHH ALRKLKEAPTGSSKYLLESDVTAGPTYRLFGIPVTVTNKLAEGKAVLADTTQIAVARDLA HHHHHHCCCCCCCCEEEECCCCCCCCEEEEEEEEEEECHHCCCCEEEECCHHHHHHHHCC PSVKLLDQRYAEYDEQAIRVVTRYDLGLLHPEAVVVLTAAAP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC >Mature Secondary Structure ATETTAANPELLQEQVANILVQPLEAASVVLSSGVRIFDTSGPLRIPKLTAGASVGFVA CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCEECCEECCCCCCCEEE EGGLIPEADVDFGEISLMPSTLKSLKVLIRFTNELLRQSVIGLDATLRQRLVTDVSNALD CCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH TALLTGAGTSNTITGLINQTGVQTGELDVADADSLLDAIALASAAEVTPNRWFINGADFI HHHHCCCCCCCCEEEHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHH ALRKLKEAPTGSSKYLLESDVTAGPTYRLFGIPVTVTNKLAEGKAVLADTTQIAVARDLA HHHHHHCCCCCCCCEEEECCCCCCCCEEEEEEEEEEECHHCCCCEEEECCHHHHHHHHCC PSVKLLDQRYAEYDEQAIRVVTRYDLGLLHPEAVVVLTAAAP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA