Definition Mycobacterium sp. KMS chromosome, complete genome.
Accession NC_008705
Length 5,737,227

Click here to switch to the map view.

The map label for this gene is 119869092

Identifier: 119869092

GI number: 119869092

Start: 3203497

End: 3203937

Strand: Direct

Name: 119869092

Synonym: Mkms_3060

Alternate gene names: NA

Gene position: 3203497-3203937 (Clockwise)

Preceding gene: 119869091

Following gene: 119869093

Centisome position: 55.84

GC content: 66.89

Gene sequence:

>441_bases
GTGTCAGCAGCTTCCACGCAACCGGCGATCGACGGCTGGTTCGCCACCGACGGGTCCGGTGAGGCCTATCTGATCGGCGG
CAAGTGCCATCAGTGCGGAACCTATGTCTTCCCTCCGCGGGCGAACAACTGCCCCAACCCCGCCTGCGACGGCGACGACC
TCGCGCAGGTCCCGCTGTCCCGGCGCGGAAAGCTGTGGAGCTACACCGAGAATCGGTACGCACCGCCGCCGCCGTATCCG
TCACCGGATCCGTTCGAGCCCTTCGCCGTCGCCGCGGTCGAACTGGCCGACGAGGGTCTGATCGTGCTCGGGAAAGTGGT
CGAGGGGACACTCGCCGCCGATCTGAAGGTCGGCATGGAGATGGAGCTGACCACGATGCCGCTCTACACCGACGACGACG
GCGTCGACCGGATCGTCTACGCGTGGAGGATCGCCCGATGA

Upstream 100 bases:

>100_bases
CGCGACAACGCTGACGATCTGCTGCGCATACTGCTCGCCGCCGCCGCCCACTGACTGGAACACGTTTCAGTTTTGTCGGT
CCACTGGGTACGCTGACCGC

Downstream 100 bases:

>100_bases
GCCCCGAACCCGTCTACATCCTCGGAGCGGGTATGCACCCGTGGGGCAAATGGGGCCGTGACTTCACCGAGTACGGGGTG
GTGGCCGCCCGCGCCGCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSAASTQPAIDGWFATDGSGEAYLIGGKCHQCGTYVFPPRANNCPNPACDGDDLAQVPLSRRGKLWSYTENRYAPPPPYP
SPDPFEPFAVAAVELADEGLIVLGKVVEGTLAADLKVGMEMELTTMPLYTDDDGVDRIVYAWRIAR

Sequences:

>Translated_146_residues
MSAASTQPAIDGWFATDGSGEAYLIGGKCHQCGTYVFPPRANNCPNPACDGDDLAQVPLSRRGKLWSYTENRYAPPPPYP
SPDPFEPFAVAAVELADEGLIVLGKVVEGTLAADLKVGMEMELTTMPLYTDDDGVDRIVYAWRIAR
>Mature_145_residues
SAASTQPAIDGWFATDGSGEAYLIGGKCHQCGTYVFPPRANNCPNPACDGDDLAQVPLSRRGKLWSYTENRYAPPPPYPS
PDPFEPFAVAAVELADEGLIVLGKVVEGTLAADLKVGMEMELTTMPLYTDDDGVDRIVYAWRIAR

Specific function: Unknown

COG id: COG1545

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15783; Mature: 15652

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAASTQPAIDGWFATDGSGEAYLIGGKCHQCGTYVFPPRANNCPNPACDGDDLAQVPLS
CCCCCCCCCCCCEEEECCCCCEEEECCEECCCCCEEECCCCCCCCCCCCCCCCCEECCCC
RRGKLWSYTENRYAPPPPYPSPDPFEPFAVAAVELADEGLIVLGKVVEGTLAADLKVGME
CCCCEEEECCCCCCCCCCCCCCCCCCCHHEEEEEECCCCEEEEEEECCCEEEEEEECCCE
MELTTMPLYTDDDGVDRIVYAWRIAR
EEEEEECEEECCCCCCEEEEEEEECC
>Mature Secondary Structure 
SAASTQPAIDGWFATDGSGEAYLIGGKCHQCGTYVFPPRANNCPNPACDGDDLAQVPLS
CCCCCCCCCCCEEEECCCCCEEEECCEECCCCCEEECCCCCCCCCCCCCCCCCEECCCC
RRGKLWSYTENRYAPPPPYPSPDPFEPFAVAAVELADEGLIVLGKVVEGTLAADLKVGME
CCCCEEEECCCCCCCCCCCCCCCCCCCHHEEEEEECCCCEEEEEEECCCEEEEEEECCCE
MELTTMPLYTDDDGVDRIVYAWRIAR
EEEEEECEEECCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA