| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119869073
Identifier: 119869073
GI number: 119869073
Start: 3184091
End: 3185026
Strand: Direct
Name: 119869073
Synonym: Mkms_3041
Alternate gene names: NA
Gene position: 3184091-3185026 (Clockwise)
Preceding gene: 119869072
Following gene: 119869074
Centisome position: 55.5
GC content: 78.85
Gene sequence:
>936_bases GTGCAGGCGGGGCCGGCGGCGAGAACCGCTCCACCGTGCTCGACGAACCACCACCCGGAGCCGGCGGAGCCGGAGGCGAC ACGTTCTCCACCGAACTCACGGACGGACCACCCGGCGCCGGAGGCGCAGGCGGCGTCACACCACTCGCGGAATCCACGGT GGCCGCAGGCGGAGCCGGCGGAGCCGGAGGCGACACGTTCTCGACCGAACTCACGGACGGACCACCCGGAGCCGGCGGAC CCGGAGGCGTCACACCGGCAGCGGGCTCAACCACCGCCGCAGGCGGAGCCGGCGGACCCGGAGGCGTCACCGCACCACCC GAACCACCCGCCGGACCACCCGGCGCCGGAGGCGCAGGCGGCGTCACACCCGAAGCCGGCTCAACCACCGCCGCAGGCGG AGCCGGCGGACCCGGAGGCGTCACCGCACCACCCGAACCACCCGCCGGACCACCCGGCGCCGGAGGCGCAGGCGGCGTCA CACCCGAAGCCGGCTCAACCACCGCCGCGGGCGGGGCCGGCGGAGCAGGCGGCGTCGCACCGGCGGCGGGCTCAACCACC GCCGCAGGCGGAGCCGGAGGCGCAGCAGGAGCGCCCGCTCCGCCCGAACCACCAGCCGGGGCACCCACCGCGCTTGGCGC GGGCGGTACCGCACCGGCCGCAGGCTGAACCACGCCAGCCGGCGGGGCTGCGGGCGCAGGCGGCGTCACACCGCTCGACG AGTCGACGACACCGGCAGGCACGGCAGGCGGAGCAGCCGGTGCGCCGACTCCACCCGAAGCGGCCACCGGCGCACCCGGC GCAGCAGGCGCCGGAGGAACCGCGCCGCCACCGGCGCCCGCCGCGGGCACGCCCGGCGCGCCGGGTGCCGGCGGTGTCGC GCCGCTGGCCGTGTCGACACGAGCGGTCGGCGGAAGCGGGCCGGAGGGCGGAGTGA
Upstream 100 bases:
>100_bases GGAGGCGACACGTTCTCCACCGAACTCACGGACGGACCACCTGGGGCCGGAGGAGCCGGAGGCGTAACGGCCTCAACAGA ATTCGCAGCCGGTACAGCTG
Downstream 100 bases:
>100_bases CGCTCTGCGACGACGACGTCACGGGCGCACTGGGGACGGGCGGCCGAGGCGGGGTCGCGGCGGCGGTGCCGTTGAGCGAG CCAGCGGGGGGGATCGCCAC
Product: putative trans-sialidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MQAGPAARTAPPCSTNHHPEPAEPEATRSPPNSRTDHPAPEAQAASHHSRNPRWPQAEPAEPEATRSRPNSRTDHPEPAD PEASHRQRAQPPPQAEPADPEASPHHPNHPPDHPAPEAQAASHPKPAQPPPQAEPADPEASPHHPNHPPDHPAPEAQAAS HPKPAQPPPRAGPAEQAASHRRRAQPPPQAEPEAQQERPLRPNHQPGHPPRLARAVPHRPQAEPRQPAGLRAQAASHRST SRRHRQARQAEQPVRRLHPKRPPAHPAQQAPEEPRRHRRPPRARPARRVPAVSRRWPCRHERSAEAGRRAE
Sequences:
>Translated_311_residues MQAGPAARTAPPCSTNHHPEPAEPEATRSPPNSRTDHPAPEAQAASHHSRNPRWPQAEPAEPEATRSRPNSRTDHPEPAD PEASHRQRAQPPPQAEPADPEASPHHPNHPPDHPAPEAQAASHPKPAQPPPQAEPADPEASPHHPNHPPDHPAPEAQAAS HPKPAQPPPRAGPAEQAASHRRRAQPPPQAEPEAQQERPLRPNHQPGHPPRLARAVPHRPQAEPRQPAGLRAQAASHRST SRRHRQARQAEQPVRRLHPKRPPAHPAQQAPEEPRRHRRPPRARPARRVPAVSRRWPCRHERSAEAGRRAE >Mature_311_residues MQAGPAARTAPPCSTNHHPEPAEPEATRSPPNSRTDHPAPEAQAASHHSRNPRWPQAEPAEPEATRSRPNSRTDHPEPAD PEASHRQRAQPPPQAEPADPEASPHHPNHPPDHPAPEAQAASHPKPAQPPPQAEPADPEASPHHPNHPPDHPAPEAQAAS HPKPAQPPPRAGPAEQAASHRRRAQPPPQAEPEAQQERPLRPNHQPGHPPRLARAVPHRPQAEPRQPAGLRAQAASHRST SRRHRQARQAEQPVRRLHPKRPPAHPAQQAPEEPRRHRRPPRARPARRVPAVSRRWPCRHERSAEAGRRAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34247; Mature: 34247
Theoretical pI: Translated: 11.81; Mature: 11.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAGPAARTAPPCSTNHHPEPAEPEATRSPPNSRTDHPAPEAQAASHHSRNPRWPQAEPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC EPEATRSRPNSRTDHPEPADPEASHRQRAQPPPQAEPADPEASPHHPNHPPDHPAPEAQA CCHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH ASHPKPAQPPPQAEPADPEASPHHPNHPPDHPAPEAQAASHPKPAQPPPRAGPAEQAASH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHH RRRAQPPPQAEPEAQQERPLRPNHQPGHPPRLARAVPHRPQAEPRQPAGLRAQAASHRST HHHCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH SRRHRQARQAEQPVRRLHPKRPPAHPAQQAPEEPRRHRRPPRARPARRVPAVSRRWPCRH HHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHCCCCCCCCHHHCCCHHHCCCCHH ERSAEAGRRAE HHHHHCCCCCC >Mature Secondary Structure MQAGPAARTAPPCSTNHHPEPAEPEATRSPPNSRTDHPAPEAQAASHHSRNPRWPQAEPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC EPEATRSRPNSRTDHPEPADPEASHRQRAQPPPQAEPADPEASPHHPNHPPDHPAPEAQA CCHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH ASHPKPAQPPPQAEPADPEASPHHPNHPPDHPAPEAQAASHPKPAQPPPRAGPAEQAASH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHH RRRAQPPPQAEPEAQQERPLRPNHQPGHPPRLARAVPHRPQAEPRQPAGLRAQAASHRST HHHCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH SRRHRQARQAEQPVRRLHPKRPPAHPAQQAPEEPRRHRRPPRARPARRVPAVSRRWPCRH HHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHCCCCCCCCHHHCCCHHHCCCCHH ERSAEAGRRAE HHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA