| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is lon [H]
Identifier: 119868851
GI number: 119868851
Start: 2938631
End: 2940982
Strand: Direct
Name: lon [H]
Synonym: Mkms_2819
Alternate gene names: 119868851
Gene position: 2938631-2940982 (Clockwise)
Preceding gene: 119868850
Following gene: 119868852
Centisome position: 51.22
GC content: 70.28
Gene sequence:
>2352_bases ATGGCTCAAGCCACATCTGTGCCGGTGTTGTTCTCGAACGAGACGATCGTGCTGCCCGGCATGGTCGTGCCGATCGAACT GGACGACGCCGCCCGCGCCGCCGTGGAAGCAGCGAAGGTCGCTGCCGCCCCCGGTGAGTCCGGTGAACTGCTCATCGCCC CCCGACTGGACGACCGCTACCCCACCTACGGTGTCCTGGCGACGATCGTGCAGATCGGCCGCATCCCCAGCGGCGCCGCG GCGGTCGTCCGCGGAACCAGGCGGGCCCACATCGGCGCCGGCGTCGACGGCCCCGGCACGGCGATGTGGGTCTCGGTCGA CGAGGTGCCCGAACCCGAGATCACCGACCAGACCCGCGCCCTCGCCGCGGACTACAAGAAGCTCCTGCTGGCGATGCTGC AGCGCCGCGAGGCCTGGCAGATCATCGACTTCGTCAACCAGCTGACCGATCCGTCGGCGCTGGCGGACACCGCCGGGTAC GCGTCGTACCTGACGCCGGTGCAGAAGCGCCAGCTGCTCGAGACGCCTGACGTCGAAGAGCGGCTGCGCGCGCTCATCGA CTGGACGGGCGACCACCTGGCCGAGGTCGAGGTCACCGACAAGATCGCCGAGGACGTGCGGTCCGGTATGGAGAAGCAGC AGAAGGAGTTCCTGCTGCGCCAGCAACTCGCCGCGATCCGCAAGGAACTCGGCGAACTCGGGCCCGATGGCGAAGAGGGC TCCGACGACTACCGGTCCCGCATCGAGGCCGCCGACCTGCCCGAGAAGGTGCGCGAGGCGGCGCTGCGCGAAGCCGGCAA GCTGGAACGCGCCAGCGACCAGAGCCCGGAGGGCGGCTGGATCCGCACCTGGCTCGACACCGTGCTGGACCTGCCGTGGA ACGTGCGGACCGAGGACTCGACCGATCTGACGGCGGCGCGGGAGATCCTCGACGCCGATCATCACGGTCTCGAGGACGTC AAGGACCGCATCGTCGAATACCTGGCCGTACGGGCGCGCCGCGCCCAGCGCGGGCTGCAGGTCGTCGGCGGCCGCGGATC CGGTGCGGTGATGGTGCTGGCCGGGCCGCCCGGCGTCGGCAAGACCTCGCTCGGTGAATCCGTGGCGCGGGCCCTGGGCC GCGAGTTCGTGCGGGTCGCCCTGGGCGGTGTGCGCGACGAGGCGGAGATCCGCGGACACCGGCGGACCTACGTCGGCGCC CTGCCGGGCCGCATCGTGCGCGCCATCGCAGAGGCGGGTTCGATGAACCCCGTCGTGCTGCTCGACGAGATCGACAAGGT CGGCAGCGACTACCGTGGCGATCCGGCCGCGGCACTGCTCGAGGTGCTCGACCCGGCGCAGAACCACACGTTCCGCGACC ACTACCTCGACCTCGATCTCGACCTGTCCGATGTGGTGTTCCTGGCCACGGCCAACGTGATCGAGAACATCCCGCAGGCC CTGCTGGACCGGATGGAACTGGTGCAGATCGACGGTTACACCTCCGACGACAAGGTGGCCATCGCCCGCGACTTCCTGCT GCCGCGGCAGCGCGAGCGCGCGGCGCTGACCACGGATGAAGTCGAGGTGACCGATGCGGCGCTGCGCAAGATCGCCGCGG ATTACACCCGCGAACCGGGTGTGCGCCAGTTCGAGAGGCTGCTGGCAAAGGCGATGCGCAAGGCGACCACGAAGTTGGCC ACCAGCGACGAGCCGATCACGATCGACGAGCCCGATCTCGTGGAGTACCTGGGCCGTCCGCGCTTCATGCCGGAGTCGGC CGAGCGCACCGCGGTGCCGGGCGTGGCGACCGGGCTGGCGGTGACCGGACTGGGCGGTGACGTGCTCTACATCGAAGCCG GTGCCACCGATGGCGAACCGGGCCTGCAGCTGACGGGTCAGCTGGGCGACGTGATGAAGGAGTCCGCGCAGATCGCGCTG TCCTACGTGCGCGCCCACGCCGCCGAACTCGGCGTCGACCCGAAGGCGCTGGACCGCCGCATCCACGTGCACGTTCCCGC GGGTGCCGTGCCGAAGGACGGTCCGTCGGCCGGCGTCACGATGGTCACCGCGCTGGTGTCCATGGCGACGGGACGGCAGG TGCGCTCCGACGTCGGGATGACCGGCGAGGTGACGCTCAACGGCCGCGTCCTGCCGATCGGCGGGGTCAAGCAGAAGCTG CTGGCCGCGCAGCGTGCGGGGTTGTCGACGGTGTTCATCCCACAGCGCAACGAGCCGGATCTGGATGACGTGCCCGCCGA AGTCCTGGCGGAGCTCGAGGTTCGTCCGATGACCGATGTCGCCGACATCGTCGCGCAGGCGCTCGAACCGGCGGCGCAAG AGTCGACGCCGGCCGTCACGCGCGCCGCGTGA
Upstream 100 bases:
>100_bases GTCCCGGGCCGTCCCGGATGACCGGCGAGCGGTGACACCTCGGGGAACAAACCACCCGCGGCCAAGGTTGAGTCGATCTG ACTGAACTTTGGAGGATCAC
Downstream 100 bases:
>100_bases ACAGTGCACTCAGGGTCGTGATTCCGTGCGGGTCACGACCCTGAGTGCATTCTGCGCGCTACCGTCACGACGTGGCCTAC GACGCCGACCTCGCCGACCG
Product: ATP-dependent protease La
Products: NA
Alternate protein names: ATP-dependent protease La [H]
Number of amino acids: Translated: 783; Mature: 782
Protein sequence:
>783_residues MAQATSVPVLFSNETIVLPGMVVPIELDDAARAAVEAAKVAAAPGESGELLIAPRLDDRYPTYGVLATIVQIGRIPSGAA AVVRGTRRAHIGAGVDGPGTAMWVSVDEVPEPEITDQTRALAADYKKLLLAMLQRREAWQIIDFVNQLTDPSALADTAGY ASYLTPVQKRQLLETPDVEERLRALIDWTGDHLAEVEVTDKIAEDVRSGMEKQQKEFLLRQQLAAIRKELGELGPDGEEG SDDYRSRIEAADLPEKVREAALREAGKLERASDQSPEGGWIRTWLDTVLDLPWNVRTEDSTDLTAAREILDADHHGLEDV KDRIVEYLAVRARRAQRGLQVVGGRGSGAVMVLAGPPGVGKTSLGESVARALGREFVRVALGGVRDEAEIRGHRRTYVGA LPGRIVRAIAEAGSMNPVVLLDEIDKVGSDYRGDPAAALLEVLDPAQNHTFRDHYLDLDLDLSDVVFLATANVIENIPQA LLDRMELVQIDGYTSDDKVAIARDFLLPRQRERAALTTDEVEVTDAALRKIAADYTREPGVRQFERLLAKAMRKATTKLA TSDEPITIDEPDLVEYLGRPRFMPESAERTAVPGVATGLAVTGLGGDVLYIEAGATDGEPGLQLTGQLGDVMKESAQIAL SYVRAHAAELGVDPKALDRRIHVHVPAGAVPKDGPSAGVTMVTALVSMATGRQVRSDVGMTGEVTLNGRVLPIGGVKQKL LAAQRAGLSTVFIPQRNEPDLDDVPAEVLAELEVRPMTDVADIVAQALEPAAQESTPAVTRAA
Sequences:
>Translated_783_residues MAQATSVPVLFSNETIVLPGMVVPIELDDAARAAVEAAKVAAAPGESGELLIAPRLDDRYPTYGVLATIVQIGRIPSGAA AVVRGTRRAHIGAGVDGPGTAMWVSVDEVPEPEITDQTRALAADYKKLLLAMLQRREAWQIIDFVNQLTDPSALADTAGY ASYLTPVQKRQLLETPDVEERLRALIDWTGDHLAEVEVTDKIAEDVRSGMEKQQKEFLLRQQLAAIRKELGELGPDGEEG SDDYRSRIEAADLPEKVREAALREAGKLERASDQSPEGGWIRTWLDTVLDLPWNVRTEDSTDLTAAREILDADHHGLEDV KDRIVEYLAVRARRAQRGLQVVGGRGSGAVMVLAGPPGVGKTSLGESVARALGREFVRVALGGVRDEAEIRGHRRTYVGA LPGRIVRAIAEAGSMNPVVLLDEIDKVGSDYRGDPAAALLEVLDPAQNHTFRDHYLDLDLDLSDVVFLATANVIENIPQA LLDRMELVQIDGYTSDDKVAIARDFLLPRQRERAALTTDEVEVTDAALRKIAADYTREPGVRQFERLLAKAMRKATTKLA TSDEPITIDEPDLVEYLGRPRFMPESAERTAVPGVATGLAVTGLGGDVLYIEAGATDGEPGLQLTGQLGDVMKESAQIAL SYVRAHAAELGVDPKALDRRIHVHVPAGAVPKDGPSAGVTMVTALVSMATGRQVRSDVGMTGEVTLNGRVLPIGGVKQKL LAAQRAGLSTVFIPQRNEPDLDDVPAEVLAELEVRPMTDVADIVAQALEPAAQESTPAVTRAA >Mature_782_residues AQATSVPVLFSNETIVLPGMVVPIELDDAARAAVEAAKVAAAPGESGELLIAPRLDDRYPTYGVLATIVQIGRIPSGAAA VVRGTRRAHIGAGVDGPGTAMWVSVDEVPEPEITDQTRALAADYKKLLLAMLQRREAWQIIDFVNQLTDPSALADTAGYA SYLTPVQKRQLLETPDVEERLRALIDWTGDHLAEVEVTDKIAEDVRSGMEKQQKEFLLRQQLAAIRKELGELGPDGEEGS DDYRSRIEAADLPEKVREAALREAGKLERASDQSPEGGWIRTWLDTVLDLPWNVRTEDSTDLTAAREILDADHHGLEDVK DRIVEYLAVRARRAQRGLQVVGGRGSGAVMVLAGPPGVGKTSLGESVARALGREFVRVALGGVRDEAEIRGHRRTYVGAL PGRIVRAIAEAGSMNPVVLLDEIDKVGSDYRGDPAAALLEVLDPAQNHTFRDHYLDLDLDLSDVVFLATANVIENIPQAL LDRMELVQIDGYTSDDKVAIARDFLLPRQRERAALTTDEVEVTDAALRKIAADYTREPGVRQFERLLAKAMRKATTKLAT SDEPITIDEPDLVEYLGRPRFMPESAERTAVPGVATGLAVTGLGGDVLYIEAGATDGEPGLQLTGQLGDVMKESAQIALS YVRAHAAELGVDPKALDRRIHVHVPAGAVPKDGPSAGVTMVTALVSMATGRQVRSDVGMTGEVTLNGRVLPIGGVKQKLL AAQRAGLSTVFIPQRNEPDLDDVPAEVLAELEVRPMTDVADIVAQALEPAAQESTPAVTRAA
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI31377667, Length=570, Percent_Identity=45.0877192982456, Blast_Score=491, Evalue=1e-138, Organism=Homo sapiens, GI21396489, Length=703, Percent_Identity=36.5576102418208, Blast_Score=479, Evalue=1e-135, Organism=Escherichia coli, GI1786643, Length=796, Percent_Identity=43.5929648241206, Blast_Score=599, Evalue=1e-172, Organism=Caenorhabditis elegans, GI17505831, Length=631, Percent_Identity=37.4009508716323, Blast_Score=439, Evalue=1e-123, Organism=Caenorhabditis elegans, GI17556486, Length=553, Percent_Identity=39.2405063291139, Blast_Score=408, Evalue=1e-114, Organism=Saccharomyces cerevisiae, GI6319449, Length=672, Percent_Identity=37.9464285714286, Blast_Score=468, Evalue=1e-132, Organism=Drosophila melanogaster, GI221513036, Length=699, Percent_Identity=38.483547925608, Blast_Score=500, Evalue=1e-141, Organism=Drosophila melanogaster, GI24666867, Length=699, Percent_Identity=38.483547925608, Blast_Score=500, Evalue=1e-141,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 84265; Mature: 84133
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS01046 LON_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQATSVPVLFSNETIVLPGMVVPIELDDAARAAVEAAKVAAAPGESGELLIAPRLDDRY CCCCCCCCEEECCCEEEECCEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCC PTYGVLATIVQIGRIPSGAAAVVRGTRRAHIGAGVDGPGTAMWVSVDEVPEPEITDQTRA CHHHHHHHHHHHCCCCCCHHHHHHCCHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHH LAADYKKLLLAMLQRREAWQIIDFVNQLTDPSALADTAGYASYLTPVQKRQLLETPDVEE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHCCCCCHHH RLRALIDWTGDHLAEVEVTDKIAEDVRSGMEKQQKEFLLRQQLAAIRKELGELGPDGEEG HHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SDDYRSRIEAADLPEKVREAALREAGKLERASDQSPEGGWIRTWLDTVLDLPWNVRTEDS CHHHHHHCCCCCCHHHHHHHHHHHHHCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC TDLTAAREILDADHHGLEDVKDRIVEYLAVRARRAQRGLQVVGGRGSGAVMVLAGPPGVG CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEECCCCCC KTSLGESVARALGREFVRVALGGVRDEAEIRGHRRTYVGALPGRIVRAIAEAGSMNPVVL CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHEECCCHHHHHHHHHHCCCCCCEEE LDEIDKVGSDYRGDPAAALLEVLDPAQNHTFRDHYLDLDLDLSDVVFLATANVIENIPQA EECHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHH LLDRMELVQIDGYTSDDKVAIARDFLLPRQRERAALTTDEVEVTDAALRKIAADYTREPG HHHHHHEEEECCCCCCCCCHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC VRQFERLLAKAMRKATTKLATSDEPITIDEPDLVEYLGRPRFMPESAERTAVPGVATGLA HHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHCCCCCCCCCCCCCCCCCCHHHCCE VTGLGGDVLYIEAGATDGEPGLQLTGQLGDVMKESAQIALSYVRAHAAELGVDPKALDRR EECCCCCEEEEECCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCE IHVHVPAGAVPKDGPSAGVTMVTALVSMATGRQVRSDVGMTGEVTLNGRVLPIGGVKQKL EEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCEEEEECCEEEECCCHHHHH LAAQRAGLSTVFIPQRNEPDLDDVPAEVLAELEVRPMTDVADIVAQALEPAAQESTPAVT HHHHHCCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCHHHHCCCCCHH RAA CCC >Mature Secondary Structure AQATSVPVLFSNETIVLPGMVVPIELDDAARAAVEAAKVAAAPGESGELLIAPRLDDRY CCCCCCCEEECCCEEEECCEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCC PTYGVLATIVQIGRIPSGAAAVVRGTRRAHIGAGVDGPGTAMWVSVDEVPEPEITDQTRA CHHHHHHHHHHHCCCCCCHHHHHHCCHHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHH LAADYKKLLLAMLQRREAWQIIDFVNQLTDPSALADTAGYASYLTPVQKRQLLETPDVEE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHCCCCCHHH RLRALIDWTGDHLAEVEVTDKIAEDVRSGMEKQQKEFLLRQQLAAIRKELGELGPDGEEG HHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SDDYRSRIEAADLPEKVREAALREAGKLERASDQSPEGGWIRTWLDTVLDLPWNVRTEDS CHHHHHHCCCCCCHHHHHHHHHHHHHCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC TDLTAAREILDADHHGLEDVKDRIVEYLAVRARRAQRGLQVVGGRGSGAVMVLAGPPGVG CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEECCCCCC KTSLGESVARALGREFVRVALGGVRDEAEIRGHRRTYVGALPGRIVRAIAEAGSMNPVVL CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHEECCCHHHHHHHHHHCCCCCCEEE LDEIDKVGSDYRGDPAAALLEVLDPAQNHTFRDHYLDLDLDLSDVVFLATANVIENIPQA EECHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHEEECCCCHHHHHHHHHHHHHHHHHHH LLDRMELVQIDGYTSDDKVAIARDFLLPRQRERAALTTDEVEVTDAALRKIAADYTREPG HHHHHHEEEECCCCCCCCCHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC VRQFERLLAKAMRKATTKLATSDEPITIDEPDLVEYLGRPRFMPESAERTAVPGVATGLA HHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHCCCCCCCCCCCCCCCCCCHHHCCE VTGLGGDVLYIEAGATDGEPGLQLTGQLGDVMKESAQIALSYVRAHAAELGVDPKALDRR EECCCCCEEEEECCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCE IHVHVPAGAVPKDGPSAGVTMVTALVSMATGRQVRSDVGMTGEVTLNGRVLPIGGVKQKL EEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCEEEEECCEEEECCCHHHHH LAAQRAGLSTVFIPQRNEPDLDDVPAEVLAELEVRPMTDVADIVAQALEPAAQESTPAVT HHHHHCCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCHHHHCCCCCHH RAA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9425059 [H]