| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119868845
Identifier: 119868845
GI number: 119868845
Start: 2932845
End: 2934536
Strand: Direct
Name: 119868845
Synonym: Mkms_2813
Alternate gene names: NA
Gene position: 2932845-2934536 (Clockwise)
Preceding gene: 119868844
Following gene: 119868846
Centisome position: 51.12
GC content: 70.57
Gene sequence:
>1692_bases ATGACGGTTTCGCTCGGTCGTGACGTCGAACCGTACTACGACCTGGGGTCCTACCACCGCGCGGTCGAAACGCCGTCACC GCAAGCGCAGACCTGGTTCGACCGCGGCCTGATCTGGGCCTATGCGTTCAACCACGAGGAGGCGATCCGCTGTTTCGAGC GGGCGCTGGAACTCGACCCGGACCTGGCCGTCGCGCGCTGGGGCATCGCCTACTCCGTCGGCCCGAACTACAACAAGCCG TGGGAGGCATTCGATCCGGTCGACCTGGGCGCATCGCTGGCGCGGGCCCGGATGGAGCTGCGGCTCGCGCTGAACGGTCG CGCGTCGGCCGTCGAACGCGGCCTGATCGAGGCGCTGCAGGCCCGCTTCCCGGTCGACGACCCCGGGGCGCCCGAGGCGC TGCAGGACGGGCACCGGGTCTACGCCGACGCGATGGTGGAACTCGCCGCGGCCTACCCCGACGACGTCGACGTGCAGGCG CTGGCCGCCGATGCGCTGGTCAACATCACGGCCTGGGCGCTGTGGGACACCAGGACGGGCGAGCCGGCGCCGGGGTCGCG GGTGGTGGAGGCCAAGGGCATCCTCGACGCGGCGCTGGCCACCGACGCCGGACGCCGGCACCCGGGCGTGCTGCACCTGT ACCTGCACACCATGGAGATGTCGGCGGCCCCCGAGGATGCGCTGCCCGCGGCCGACCTGCTGCGCGGGCTGGTGCCCGAC GCCGGACACCTGCAGCACATGCCCAGCCACATCGACGTCCTCTGCGGGCAGTACCGGGCGTCGGTGACCGCCAATCTCGC TGCGGTCGAAGCGGACCGGCGGTTCGTGGAGCGGGCCGGACCGCTGAACTTCTACTCCCTCTACCGTGCGCACGATCTGC ACTTCGTGGTGTATTCGGCGATGTTCGAAGGGTCGTCGGAGGTCGCCCTGCGCGCGGCCGACGAACTCGCAGGCCAACTG ACGCCGGAACTGCTCGCCATCGAATCACCCCCGATGGCCGACTGGCTCGAGGCGTTCGTCCCACTGCGGGTGCACGTGCT GGTGCGGTTCGGCCGCTGGGACGACCTCATCGCCGAACCCCTGCCCGACGATCAGGTGCTCCACTGCACCACGACCGCGA CCATCCACTACGGCCGTGGGGTCGCGCACGCCGCCAAGGGAAACCTCGACCAGGCCCGGGCCGAACGCGACGGCTTCGCC TCCGCCTACGTCCGCATCCCCGAGTCCCGCTACCTGTTCAACAACACCAGCCGCGACATCCTCGCGGTCGCCGAAGCGAT GCTGGACGGTGAGATCGCCTACCGGGCAGGTCGATTCGAGGAGGCCTTCGAACACCTGCGGCGCGCGATCGAGCGGGACG ACTCCCTGCCGTACGACGAACCGTGGGGCTGGATGCAACCGACCCGCCACGCCTACGGGGCGCTGCTGCTCGAACAGGGC CGCGTCGAGGATGCCGCCGCCGTGTACGCCGCCGACCTCGGCCTCGACCCGCAACTGGCCCGTTCGTCGCAGCATCCGGG CAACGTGTGGAGTCTGCACGGCTATCACGAATGCCTGCAGCGCCTCGGCCGGACCGCGGAGGCCGCCATCGTCGGTCAGC AGCTCAAGCTGGCGCGGGCGCGGGCCGACGTGCCGATCACGGCATCGTGCGCCTGCCGTCTCGACGTCGCCGACGACTGC TGTTCCGACTGA
Upstream 100 bases:
>100_bases GGGGCGACGACCGCCGTGGTGACACTCGCGGTGTGGGCCGCGGCGGGTGCGGTGCTCGCCACGCTCGCCACCGTCGCCTC ACGGGCATATCGTTCTCGCC
Downstream 100 bases:
>100_bases CGGCCGGCGCCGCTGCGTAGACTCCGGCACGTGGCGATCAGCGACTCGGATCTCGAACACCTCCGCCGCTGTGTGGACCT CGCCCGCGAGGCGCTCGACG
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain Protein; Tetratricopeptide Domain Protein; Tetratricopeptide Repeat Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Region; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein
Number of amino acids: Translated: 563; Mature: 562
Protein sequence:
>563_residues MTVSLGRDVEPYYDLGSYHRAVETPSPQAQTWFDRGLIWAYAFNHEEAIRCFERALELDPDLAVARWGIAYSVGPNYNKP WEAFDPVDLGASLARARMELRLALNGRASAVERGLIEALQARFPVDDPGAPEALQDGHRVYADAMVELAAAYPDDVDVQA LAADALVNITAWALWDTRTGEPAPGSRVVEAKGILDAALATDAGRRHPGVLHLYLHTMEMSAAPEDALPAADLLRGLVPD AGHLQHMPSHIDVLCGQYRASVTANLAAVEADRRFVERAGPLNFYSLYRAHDLHFVVYSAMFEGSSEVALRAADELAGQL TPELLAIESPPMADWLEAFVPLRVHVLVRFGRWDDLIAEPLPDDQVLHCTTTATIHYGRGVAHAAKGNLDQARAERDGFA SAYVRIPESRYLFNNTSRDILAVAEAMLDGEIAYRAGRFEEAFEHLRRAIERDDSLPYDEPWGWMQPTRHAYGALLLEQG RVEDAAAVYAADLGLDPQLARSSQHPGNVWSLHGYHECLQRLGRTAEAAIVGQQLKLARARADVPITASCACRLDVADDC CSD
Sequences:
>Translated_563_residues MTVSLGRDVEPYYDLGSYHRAVETPSPQAQTWFDRGLIWAYAFNHEEAIRCFERALELDPDLAVARWGIAYSVGPNYNKP WEAFDPVDLGASLARARMELRLALNGRASAVERGLIEALQARFPVDDPGAPEALQDGHRVYADAMVELAAAYPDDVDVQA LAADALVNITAWALWDTRTGEPAPGSRVVEAKGILDAALATDAGRRHPGVLHLYLHTMEMSAAPEDALPAADLLRGLVPD AGHLQHMPSHIDVLCGQYRASVTANLAAVEADRRFVERAGPLNFYSLYRAHDLHFVVYSAMFEGSSEVALRAADELAGQL TPELLAIESPPMADWLEAFVPLRVHVLVRFGRWDDLIAEPLPDDQVLHCTTTATIHYGRGVAHAAKGNLDQARAERDGFA SAYVRIPESRYLFNNTSRDILAVAEAMLDGEIAYRAGRFEEAFEHLRRAIERDDSLPYDEPWGWMQPTRHAYGALLLEQG RVEDAAAVYAADLGLDPQLARSSQHPGNVWSLHGYHECLQRLGRTAEAAIVGQQLKLARARADVPITASCACRLDVADDC CSD >Mature_562_residues TVSLGRDVEPYYDLGSYHRAVETPSPQAQTWFDRGLIWAYAFNHEEAIRCFERALELDPDLAVARWGIAYSVGPNYNKPW EAFDPVDLGASLARARMELRLALNGRASAVERGLIEALQARFPVDDPGAPEALQDGHRVYADAMVELAAAYPDDVDVQAL AADALVNITAWALWDTRTGEPAPGSRVVEAKGILDAALATDAGRRHPGVLHLYLHTMEMSAAPEDALPAADLLRGLVPDA GHLQHMPSHIDVLCGQYRASVTANLAAVEADRRFVERAGPLNFYSLYRAHDLHFVVYSAMFEGSSEVALRAADELAGQLT PELLAIESPPMADWLEAFVPLRVHVLVRFGRWDDLIAEPLPDDQVLHCTTTATIHYGRGVAHAAKGNLDQARAERDGFAS AYVRIPESRYLFNNTSRDILAVAEAMLDGEIAYRAGRFEEAFEHLRRAIERDDSLPYDEPWGWMQPTRHAYGALLLEQGR VEDAAAVYAADLGLDPQLARSSQHPGNVWSLHGYHECLQRLGRTAEAAIVGQQLKLARARADVPITASCACRLDVADDCC SD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61930; Mature: 61799
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSLGRDVEPYYDLGSYHRAVETPSPQAQTWFDRGLIWAYAFNHEEAIRCFERALELDP CCCCCCCCCCHHHCCHHHHHHCCCCCCCHHHHHHCCEEEEEEECHHHHHHHHHHHHHCCC DLAVARWGIAYSVGPNYNKPWEAFDPVDLGASLARARMELRLALNGRASAVERGLIEALQ CHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHH ARFPVDDPGAPEALQDGHRVYADAMVELAAAYPDDVDVQALAADALVNITAWALWDTRTG HCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEEEEEECCCC EPAPGSRVVEAKGILDAALATDAGRRHPGVLHLYLHTMEMSAAPEDALPAADLLRGLVPD CCCCCCEEEEHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHCCCCCCCCCHHHHHHHHCCC AGHLQHMPSHIDVLCGQYRASVTANLAAVEADRRFVERAGPLNFYSLYRAHDLHFVVYSA CHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHH MFEGSSEVALRAADELAGQLTPELLAIESPPMADWLEAFVPLRVHVLVRFGRWDDLIAEP HHCCCCHHHHHHHHHHHHHCCCHHEEECCCCHHHHHHHHHHHHEEEHEEECCCHHHHCCC LPDDQVLHCTTTATIHYGRGVAHAAKGNLDQARAERDGFASAYVRIPESRYLFNNTSRDI CCCCCEEEEEEEEEEECCCCCCHHHCCCHHHHHHHHCCCCEEEEECCCCCEEECCCCHHH LAVAEAMLDGEIAYRAGRFEEAFEHLRRAIERDDSLPYDEPWGWMQPTRHAYGALLLEQG HHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCC RVEDAAAVYAADLGLDPQLARSSQHPGNVWSLHGYHECLQRLGRTAEAAIVGQQLKLARA CCCHHHHHHHHHCCCCHHHHHCCCCCCCEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHH RADVPITASCACRLDVADDCCSD HCCCCEEECCEEEEECCHHCCCC >Mature Secondary Structure TVSLGRDVEPYYDLGSYHRAVETPSPQAQTWFDRGLIWAYAFNHEEAIRCFERALELDP CCCCCCCCCHHHCCHHHHHHCCCCCCCHHHHHHCCEEEEEEECHHHHHHHHHHHHHCCC DLAVARWGIAYSVGPNYNKPWEAFDPVDLGASLARARMELRLALNGRASAVERGLIEALQ CHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHH ARFPVDDPGAPEALQDGHRVYADAMVELAAAYPDDVDVQALAADALVNITAWALWDTRTG HCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEEEEEECCCC EPAPGSRVVEAKGILDAALATDAGRRHPGVLHLYLHTMEMSAAPEDALPAADLLRGLVPD CCCCCCEEEEHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHCCCCCCCCCHHHHHHHHCCC AGHLQHMPSHIDVLCGQYRASVTANLAAVEADRRFVERAGPLNFYSLYRAHDLHFVVYSA CHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHH MFEGSSEVALRAADELAGQLTPELLAIESPPMADWLEAFVPLRVHVLVRFGRWDDLIAEP HHCCCCHHHHHHHHHHHHHCCCHHEEECCCCHHHHHHHHHHHHEEEHEEECCCHHHHCCC LPDDQVLHCTTTATIHYGRGVAHAAKGNLDQARAERDGFASAYVRIPESRYLFNNTSRDI CCCCCEEEEEEEEEEECCCCCCHHHCCCHHHHHHHHCCCCEEEEECCCCCEEECCCCHHH LAVAEAMLDGEIAYRAGRFEEAFEHLRRAIERDDSLPYDEPWGWMQPTRHAYGALLLEQG HHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCC RVEDAAAVYAADLGLDPQLARSSQHPGNVWSLHGYHECLQRLGRTAEAAIVGQQLKLARA CCCHHHHHHHHHCCCCHHHHHCCCCCCCEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHH RADVPITASCACRLDVADDCCSD HCCCCEEECCEEEEECCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA