| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119868801
Identifier: 119868801
GI number: 119868801
Start: 2891627
End: 2892445
Strand: Direct
Name: 119868801
Synonym: Mkms_2769
Alternate gene names: NA
Gene position: 2891627-2892445 (Clockwise)
Preceding gene: 119868799
Following gene: 119868802
Centisome position: 50.4
GC content: 69.35
Gene sequence:
>819_bases GTGACACTGGAGCCCGTGACCGCCACCCACACCGCCGTGACATTCGGTGATGTGTTGCGGACCTGGCGGCAGCGCCGCCG GCTCAGCCAACTGGATCTGGCGATCGAGGCAGACGTGTCGGCCCGCCACCTGAGCTTCCTGGAGACGGGTCGCTCGACAC CGAGCCGGGCCATGGTGCTGCGGCTGGCCGAGGTGCTCGACGTCCCGTTGCGCGAACGCAATCACCTGCTGATGACGGCC GGCCTGGCGCCGGTCTATCCCGAACGCGGCCTCGATCACCCGGAGATGGCCGCTGTGCGCGACGGGGTGCAGAAGGTGTT GTCGGCCTACGATCCCTACCCGTGTGTGGCGGTGGACCGGCACTGGAACATCCTGAGCGCCAACGCCGCAGCCGCGGTGC TGCTCGACGGTGTGGCGCCGTCGTTGCTGGAGCGGCCCAACGCGCTGCGGGTGGCGCTGCACCCCGAGGGGCTGGCGCCG CGGATCAAGAACCTGGGCCAGTGGCGCCACCATCTCATCGACCGGCTCCGCCGCGAAGTCGCGGCGAGTGGATCCGGTGA GCTCACCGCTCTACTGGCCGAACTCGAGACGTATCCCGGGCCGTCGGCGGATTCGCCCGATCCCTCGACGGTGGCCGTGC CACTCGAATTGTGCACCGCCAGCGGCGATTTGCTGACGTTCATCAGCACCGTGACGACGTTCGGCACCGCGCTCGACCTC ACCGCGGCCGAACTGAGCATCGAGGCGTTCCTGCCCGCCGACCAGGCGACCGCAGCGGCGCTGGTTTGCCGGTCAGCATC GCAGGGAAGTCCGCAGTGA
Upstream 100 bases:
>100_bases CTTCATCGCGTCCTCCTCGTGTCGTGGACGACTCCACTGTCGCGCGGACGCGTAATCGCGGCAATTACCCCGGAAGTAAT GGCGGCGGACCGGTGTGCGG
Downstream 100 bases:
>100_bases GCGGAGTCGGGACACCGAGTCAACAGAACAGAGGTGGCGCGTGAACAACCGAATCGTCATGGTGCTGGGTGCGGTCAGCG TCGTCACGCTCTCCGCATGC
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Xre Family xin-Antitoxin System Antitoxin Component; Helix-Turn-Helix Transcriptional Regulatory Protein; Xin-Antitoxin System Antitoxin Component Xre Family; HTH-Type Transcriptional Regulator; Transcriptional Regulator Xre Family; Transcriptional Regulator XRE Family Protein; Cro/CI Family Transcriptional Regulator
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MTLEPVTATHTAVTFGDVLRTWRQRRRLSQLDLAIEADVSARHLSFLETGRSTPSRAMVLRLAEVLDVPLRERNHLLMTA GLAPVYPERGLDHPEMAAVRDGVQKVLSAYDPYPCVAVDRHWNILSANAAAAVLLDGVAPSLLERPNALRVALHPEGLAP RIKNLGQWRHHLIDRLRREVAASGSGELTALLAELETYPGPSADSPDPSTVAVPLELCTASGDLLTFISTVTTFGTALDL TAAELSIEAFLPADQATAAALVCRSASQGSPQ
Sequences:
>Translated_272_residues MTLEPVTATHTAVTFGDVLRTWRQRRRLSQLDLAIEADVSARHLSFLETGRSTPSRAMVLRLAEVLDVPLRERNHLLMTA GLAPVYPERGLDHPEMAAVRDGVQKVLSAYDPYPCVAVDRHWNILSANAAAAVLLDGVAPSLLERPNALRVALHPEGLAP RIKNLGQWRHHLIDRLRREVAASGSGELTALLAELETYPGPSADSPDPSTVAVPLELCTASGDLLTFISTVTTFGTALDL TAAELSIEAFLPADQATAAALVCRSASQGSPQ >Mature_271_residues TLEPVTATHTAVTFGDVLRTWRQRRRLSQLDLAIEADVSARHLSFLETGRSTPSRAMVLRLAEVLDVPLRERNHLLMTAG LAPVYPERGLDHPEMAAVRDGVQKVLSAYDPYPCVAVDRHWNILSANAAAAVLLDGVAPSLLERPNALRVALHPEGLAPR IKNLGQWRHHLIDRLRREVAASGSGELTALLAELETYPGPSADSPDPSTVAVPLELCTASGDLLTFISTVTTFGTALDLT AAELSIEAFLPADQATAAALVCRSASQGSPQ
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29229; Mature: 29097
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLEPVTATHTAVTFGDVLRTWRQRRRLSQLDLAIEADVSARHLSFLETGRSTPSRAMVL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHCCCCHHHHHHH RLAEVLDVPLRERNHLLMTAGLAPVYPERGLDHPEMAAVRDGVQKVLSAYDPYPCVAVDR HHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECC HWNILSANAAAAVLLDGVAPSLLERPNALRVALHPEGLAPRIKNLGQWRHHLIDRLRREV CCCEEECCHHHHHHHHCCCHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH AASGSGELTALLAELETYPGPSADSPDPSTVAVPLELCTASGDLLTFISTVTTFGTALDL HCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHH TAAELSIEAFLPADQATAAALVCRSASQGSPQ HHHHHEEEEECCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TLEPVTATHTAVTFGDVLRTWRQRRRLSQLDLAIEADVSARHLSFLETGRSTPSRAMVL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHCCCCHHHHHHH RLAEVLDVPLRERNHLLMTAGLAPVYPERGLDHPEMAAVRDGVQKVLSAYDPYPCVAVDR HHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECC HWNILSANAAAAVLLDGVAPSLLERPNALRVALHPEGLAPRIKNLGQWRHHLIDRLRREV CCCEEECCHHHHHHHHCCCHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH AASGSGELTALLAELETYPGPSADSPDPSTVAVPLELCTASGDLLTFISTVTTFGTALDL HCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHH TAAELSIEAFLPADQATAAALVCRSASQGSPQ HHHHHEEEEECCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA