| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
Click here to switch to the map view.
The map label for this gene is 119868716
Identifier: 119868716
GI number: 119868716
Start: 2811788
End: 2812441
Strand: Direct
Name: 119868716
Synonym: Mkms_2683
Alternate gene names: NA
Gene position: 2811788-2812441 (Clockwise)
Preceding gene: 119868715
Following gene: 119868718
Centisome position: 49.01
GC content: 67.28
Gene sequence:
>654_bases ATGGGACTCATCGACATCGAGTTGTTCGCGACCTTGGATCTGGTCGGGCAGTCGCCCGGAAGCCCTGAGGAGGACCCGGT GGGATTCTCGTTCGGCGGGTGGCAGGCGCCCCTGCTGGACGAGGTCTCCGGCGCGCAGGTCGATACCGCGTACGAGGGAA CCGACGCGCTCCTGCTCGGTCGACGGACCTACGACATCTTCGCCGCGTATTGGCCGCATCAGCAGGGCGGCGAGGATGGT GCGATCGCGGCGCTGTTCAACAGCATCCCGAAGTACGTGGCGTCTCGTGGCAGGCCCGATCTGTCGTGGGACGGGACCAC ACAGCTGGGACCGGATCTGGTCGGTGAGGTCAGGCGGATCAGGGACCGGCACGAGCGCATCAAGGTGGTCGGCAGCCTGA ACCTGGTGCAGACCCTCCTGCGGGAGAAGCTCTTCGACCGCCTCGACCTCTGGGTGCACCCGATCGTGCTCGGCGTGGGG AAGAAGGTGTTCGACGGTGGCGCGGTTCCCACCAACCTCAGGCTGCTCCAACCGCCGGCAGCCAGTCCGACCGGAACGGT GTATCTGCGCTACGGCGTCGCCGATGGCATCCCTGCCACCGGGGACATGAGCGCACCCGATCGGGGCGTTGGCGACCAAC CGGCCACCGCGTGA
Upstream 100 bases:
>100_bases GTCTGTGCCGCGCTGGGTGAGTGAGTGGAAGTCGCGATGACTTCGCCGACGCGTGCGGGTCTATCCCTCCATCGACACAA CACACTCATCGGGAGCTGGT
Downstream 100 bases:
>100_bases GGTGGCCGCCCCGCACGGTCACCGGTCAGAACAATTCGGGTGTCACCGGCGGGACGTCGTCGAGAAACGCACTCACCACC GGCGCCACCACGTCATACGC
Product: deaminase-reductase domain-containing protein
Products: NA
Alternate protein names: Bifunctional Deaminase-Reductase Domain-Containing Protein; Deaminase-Reductase Domain-Containing Protein; Dihydrofolate Reductase; Riboflavin Biosynthesis Protein RibD; Secreted Protein; Bifunctional Deaminase-Reductase-Like Protein; Pyrimidine Reductase Protein; Pyrimidine Reductase; Bifunctional Deaminase-Reductase-Like; Riboflavin Biosynthesis Protein; Dihydrofolate Reductase-Like Protein; Dihydrofolate Reductase Protein; Riboflavin Biosynthesis RibD Domain-Containing Protein; Bifunctional Pyrimidine Deaminase/Reductase; RibD Family Protein; Riboflavin Biosynthesis Protein RibD C- Domain Protein
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MGLIDIELFATLDLVGQSPGSPEEDPVGFSFGGWQAPLLDEVSGAQVDTAYEGTDALLLGRRTYDIFAAYWPHQQGGEDG AIAALFNSIPKYVASRGRPDLSWDGTTQLGPDLVGEVRRIRDRHERIKVVGSLNLVQTLLREKLFDRLDLWVHPIVLGVG KKVFDGGAVPTNLRLLQPPAASPTGTVYLRYGVADGIPATGDMSAPDRGVGDQPATA
Sequences:
>Translated_217_residues MGLIDIELFATLDLVGQSPGSPEEDPVGFSFGGWQAPLLDEVSGAQVDTAYEGTDALLLGRRTYDIFAAYWPHQQGGEDG AIAALFNSIPKYVASRGRPDLSWDGTTQLGPDLVGEVRRIRDRHERIKVVGSLNLVQTLLREKLFDRLDLWVHPIVLGVG KKVFDGGAVPTNLRLLQPPAASPTGTVYLRYGVADGIPATGDMSAPDRGVGDQPATA >Mature_216_residues GLIDIELFATLDLVGQSPGSPEEDPVGFSFGGWQAPLLDEVSGAQVDTAYEGTDALLLGRRTYDIFAAYWPHQQGGEDGA IAALFNSIPKYVASRGRPDLSWDGTTQLGPDLVGEVRRIRDRHERIKVVGSLNLVQTLLREKLFDRLDLWVHPIVLGVGK KVFDGGAVPTNLRLLQPPAASPTGTVYLRYGVADGIPATGDMSAPDRGVGDQPATA
Specific function: Unknown
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23279; Mature: 23147
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLIDIELFATLDLVGQSPGSPEEDPVGFSFGGWQAPLLDEVSGAQVDTAYEGTDALLLG CCEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCCCCCCEEEEC RRTYDIFAAYWPHQQGGEDGAIAALFNSIPKYVASRGRPDLSWDGTTQLGPDLVGEVRRI CCHHEEHEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH RDRHERIKVVGSLNLVQTLLREKLFDRLDLWVHPIVLGVGKKVFDGGAVPTNLRLLQPPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEECCCC ASPTGTVYLRYGVADGIPATGDMSAPDRGVGDQPATA CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GLIDIELFATLDLVGQSPGSPEEDPVGFSFGGWQAPLLDEVSGAQVDTAYEGTDALLLG CEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCCCCCCEEEEC RRTYDIFAAYWPHQQGGEDGAIAALFNSIPKYVASRGRPDLSWDGTTQLGPDLVGEVRRI CCHHEEHEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH RDRHERIKVVGSLNLVQTLLREKLFDRLDLWVHPIVLGVGKKVFDGGAVPTNLRLLQPPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEECCCC ASPTGTVYLRYGVADGIPATGDMSAPDRGVGDQPATA CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA