| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is uidR [C]
Identifier: 119868687
GI number: 119868687
Start: 2786692
End: 2787315
Strand: Direct
Name: uidR [C]
Synonym: Mkms_2654
Alternate gene names: 119868687
Gene position: 2786692-2787315 (Clockwise)
Preceding gene: 119868686
Following gene: 119868693
Centisome position: 48.57
GC content: 66.99
Gene sequence:
>624_bases ATGAGTGCTGAGGAGCTTGTTGACGGCCGGCGGCTGCGCGGGTCGGTCACCAGAGCCAAGGCGATTGAAGCCGCCGCGGA GTTGTTCGCAGCACAGGGCTATTCGGCGACCAGCATGGGCAGCATCGCCTCGGCCGCCGGAATCCACTCGGCGTCGATCT ACCACGCCTTCGGAAGCAAGGAGGGTCTGCTGGGCGCGGTGGTCGAACACGCCAGCGATGAGTTCTACCACCTGCTCAGG GAACAGAGCGTCAGCAGCGGCAGCCTGCGCGACGGGCTGCGGGGGGTCGGCGTGGTCTTCGAGAAGCGGCCGCTGTTCCT CAAGCTGCTGTTGATGCTCGTGCTCGAACGCGGCGACGGCGATCCCGGAGTCCTGCGGATCGCCGCCGACGTGCGTCTCA AGGGCCGTGCGCTGATCCGCGATCTGCTGAGCCGCCAGGTCCCGGCCGGGACCGGGACGGATCTCGACGCGGCCAGCCGG CTCATCATGGTGGCTCTCGACGGCGCGTTCATCGCCCGGCAGGTTGATATGGACGCATCCGAATTCACCACACTGATGGA TTTGATCGCCGAAACGGCCGAACGGCTCCTCACCGACACCCGCACCCGACCGAACCGGGGGTGA
Upstream 100 bases:
>100_bases CCCGGCTGACCAACCGGGCCCGCGCGTTGGTCGACTACGCGAGGGAAACCTCCGCGCCGGCTTTGACGAAGACCTCGTCG ACCCCACAGACTGACAATCT
Downstream 100 bases:
>100_bases CAGCCGCCCGGCGGATCAGTCAGAGCTGGGCGCCCAGCTTGAAGCCGTGCTCCTCGTCGTCGCGGCGGGTGTAGGAGAAG CCGTCGGCACCGATGGTCAC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MSAEELVDGRRLRGSVTRAKAIEAAAELFAAQGYSATSMGSIASAAGIHSASIYHAFGSKEGLLGAVVEHASDEFYHLLR EQSVSSGSLRDGLRGVGVVFEKRPLFLKLLLMLVLERGDGDPGVLRIAADVRLKGRALIRDLLSRQVPAGTGTDLDAASR LIMVALDGAFIARQVDMDASEFTTLMDLIAETAERLLTDTRTRPNRG
Sequences:
>Translated_207_residues MSAEELVDGRRLRGSVTRAKAIEAAAELFAAQGYSATSMGSIASAAGIHSASIYHAFGSKEGLLGAVVEHASDEFYHLLR EQSVSSGSLRDGLRGVGVVFEKRPLFLKLLLMLVLERGDGDPGVLRIAADVRLKGRALIRDLLSRQVPAGTGTDLDAASR LIMVALDGAFIARQVDMDASEFTTLMDLIAETAERLLTDTRTRPNRG >Mature_206_residues SAEELVDGRRLRGSVTRAKAIEAAAELFAAQGYSATSMGSIASAAGIHSASIYHAFGSKEGLLGAVVEHASDEFYHLLRE QSVSSGSLRDGLRGVGVVFEKRPLFLKLLLMLVLERGDGDPGVLRIAADVRLKGRALIRDLLSRQVPAGTGTDLDAASRL IMVALDGAFIARQVDMDASEFTTLMDLIAETAERLLTDTRTRPNRG
Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22141; Mature: 22009
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAEELVDGRRLRGSVTRAKAIEAAAELFAAQGYSATSMGSIASAAGIHSASIYHAFGSK CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHCCCC EGLLGAVVEHASDEFYHLLREQSVSSGSLRDGLRGVGVVFEKRPLFLKLLLMLVLERGDG CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC DPGVLRIAADVRLKGRALIRDLLSRQVPAGTGTDLDAASRLIMVALDGAFIARQVDMDAS CCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEHEEECCHHHHHHHCCCHH EFTTLMDLIAETAERLLTDTRTRPNRG HHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SAEELVDGRRLRGSVTRAKAIEAAAELFAAQGYSATSMGSIASAAGIHSASIYHAFGSK CHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHCCCC EGLLGAVVEHASDEFYHLLREQSVSSGSLRDGLRGVGVVFEKRPLFLKLLLMLVLERGDG CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC DPGVLRIAADVRLKGRALIRDLLSRQVPAGTGTDLDAASRLIMVALDGAFIARQVDMDAS CCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEHEEECCHHHHHHHCCCHH EFTTLMDLIAETAERLLTDTRTRPNRG HHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA