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The map label for this gene is frdA [H]

Identifier: 119868661

GI number: 119868661

Start: 2758177

End: 2759775

Strand: Reverse

Name: frdA [H]

Synonym: Mkms_2626

Alternate gene names: 119868661

Gene position: 2759775-2758177 (Counterclockwise)

Preceding gene: 119868662

Following gene: 119868660

Centisome position: 48.1

GC content: 72.17

Gene sequence:

>1599_bases
ATGACCGCGGCCGGTGACCCCGACGTCCACCACACCGACGTCCTGGTGATCGGCGGCGGCCCGGCGGCCACCTGGGCGGC
CATCGCCGCTGCCGAGGCGGGACGCCGAGTCACCCTGGTGGACAAGGGCTACTGCGGCACCAGCGGTGCCACCGCCGCAG
GCGGCAACAATCTGTGGCTGATCCCGCCGGGACCGCGACGGGAAGAGTCCGTGCGGGAACGCGAGGCCGCCGCCGGTGGA
CTCACCGACGCCGACTGGATGCACCGGGTACTGTCGGCATCGTGGGAGCGGATCGAACAGCTCGCCCGATGGGGCTATCC
GTTCCCGGTGGGAGACGACGGCCGCCAGCTGCGCAGCAGCCTGCAGGGTCCGGAGTACATGCGCCGGATGCGCCGCAAGG
CCCACCGCAGCGGCGTCCACATTCTCGACCACCACCCGGCCACCGCACTCACCACCGATGCCGACGGAATCGTCAACGGG
GCCAACGGCATCGCCCGCCAGGACGGTGGCCGGTCGTGGCGGATCTCGGCCGGCGCCGTGGTGCTGGCCACCGGCGGCAC
CGCGTTCCTGTCCGGGACCTTCGGCACGAACGTCGACACCGGCGACGGGCTGCTGATGGCCGCCGAGGTAAGTGCCGCGC
TGTCGGGGATGGAGTTCTGCACCGCCTACGCGCTGGCGCCGGAGTGGGGCACCCACACCAAGGGCCGCATGCTGCAGTGG
GCCAGCTTCTACGACGAGCACGGCAGGCCCTTCCCCACCGAACGTGGGCTGGGCGGTCGCAAGGACGCGCAGTGGGCTCT
CGCGCACGGGCAGCGGGTGTTCGCCCGGCTGGACCGCGCACCCGTGCACATCCGCCAGACCATGCGCGACGCCCAGCCGA
ACTACTTCCTGCCCCTCGACAAGGCCGGGATCGATCCGTTCGTCACCGCCTACCCGGTCCGCATGGTCTACGAGGGGTCC
GTGCGCGGCACCGGCGGCCTGCGGTTGACCGGGCCCGACTGTGCGACCACGGTTCCCGGTCTGTTCGCCGCGGGAGACGC
GGCCACCCGGGAGCTCGTCACCGGTTCGATCAGCGGTGGCGGCAGCCACAACGGATCGTGGGCGATCGCGTCGGGAACCT
TCGCGGGACGCGGCGCCGCCGAGTTCAGCCGTCGCCGCACCGCCGGTGACGCCGTCAACGCCGACCGGGTGGGTCTGCGA
CCTGGCCCGCGGCACGCACCGACCGTCGACGAGGTGGTGCGGGCCGCGCAGCAGCACGTCCTGCCGCCGATGCGCAGCCA
CCTCAAATCCCATGAGCGCCTGACCGAATCCGCCGCGGTCCTCGAGCAGGTGTGGCGGGACATCGCCGACGGGCTGGCGC
CGGTACCGGCTCGGGAGTCGTACAAACCTCGCCAGGCGGTCGCCATGGTCGCCGCGGCGCGGTGGATCACCGCCGCCTCA
CTGGCGCGCGAGGAGACCCGGGGGCTGCACCGGCGCGAGGATCGACCGCACACCGATCACCGGTTGAATCACCGGATCCT
GACCGGCGGGCTCGACACGGTGTGGAACGATGCCGATCCCGTTGCCCCGCAGTTGATCTCAGCGGAGGCGGTGGCATGA

Upstream 100 bases:

>100_bases
CGCGTCGACCTTCCGTTCCCCCGCAGTCGCGGCGATGAGGGCTTCGACGACCTACGCCGGGTTCTGTTGGCCGAGCTCGG
GGTTCGCGAGGAGGTCGGGC

Downstream 100 bases:

>100_bases
TCGAGATCGTCCACACCGCCGCCTGCGTCGCCTGCGATGTGTGCGTGAAGGTATGCCCCACCGACGTGTTCGAACGCGGC
GAGGACGGCGTCCCGGTGAT

Product: fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 532; Mature: 531

Protein sequence:

>532_residues
MTAAGDPDVHHTDVLVIGGGPAATWAAIAAAEAGRRVTLVDKGYCGTSGATAAGGNNLWLIPPGPRREESVREREAAAGG
LTDADWMHRVLSASWERIEQLARWGYPFPVGDDGRQLRSSLQGPEYMRRMRRKAHRSGVHILDHHPATALTTDADGIVNG
ANGIARQDGGRSWRISAGAVVLATGGTAFLSGTFGTNVDTGDGLLMAAEVSAALSGMEFCTAYALAPEWGTHTKGRMLQW
ASFYDEHGRPFPTERGLGGRKDAQWALAHGQRVFARLDRAPVHIRQTMRDAQPNYFLPLDKAGIDPFVTAYPVRMVYEGS
VRGTGGLRLTGPDCATTVPGLFAAGDAATRELVTGSISGGGSHNGSWAIASGTFAGRGAAEFSRRRTAGDAVNADRVGLR
PGPRHAPTVDEVVRAAQQHVLPPMRSHLKSHERLTESAAVLEQVWRDIADGLAPVPARESYKPRQAVAMVAAARWITAAS
LAREETRGLHRREDRPHTDHRLNHRILTGGLDTVWNDADPVAPQLISAEAVA

Sequences:

>Translated_532_residues
MTAAGDPDVHHTDVLVIGGGPAATWAAIAAAEAGRRVTLVDKGYCGTSGATAAGGNNLWLIPPGPRREESVREREAAAGG
LTDADWMHRVLSASWERIEQLARWGYPFPVGDDGRQLRSSLQGPEYMRRMRRKAHRSGVHILDHHPATALTTDADGIVNG
ANGIARQDGGRSWRISAGAVVLATGGTAFLSGTFGTNVDTGDGLLMAAEVSAALSGMEFCTAYALAPEWGTHTKGRMLQW
ASFYDEHGRPFPTERGLGGRKDAQWALAHGQRVFARLDRAPVHIRQTMRDAQPNYFLPLDKAGIDPFVTAYPVRMVYEGS
VRGTGGLRLTGPDCATTVPGLFAAGDAATRELVTGSISGGGSHNGSWAIASGTFAGRGAAEFSRRRTAGDAVNADRVGLR
PGPRHAPTVDEVVRAAQQHVLPPMRSHLKSHERLTESAAVLEQVWRDIADGLAPVPARESYKPRQAVAMVAAARWITAAS
LAREETRGLHRREDRPHTDHRLNHRILTGGLDTVWNDADPVAPQLISAEAVA
>Mature_531_residues
TAAGDPDVHHTDVLVIGGGPAATWAAIAAAEAGRRVTLVDKGYCGTSGATAAGGNNLWLIPPGPRREESVREREAAAGGL
TDADWMHRVLSASWERIEQLARWGYPFPVGDDGRQLRSSLQGPEYMRRMRRKAHRSGVHILDHHPATALTTDADGIVNGA
NGIARQDGGRSWRISAGAVVLATGGTAFLSGTFGTNVDTGDGLLMAAEVSAALSGMEFCTAYALAPEWGTHTKGRMLQWA
SFYDEHGRPFPTERGLGGRKDAQWALAHGQRVFARLDRAPVHIRQTMRDAQPNYFLPLDKAGIDPFVTAYPVRMVYEGSV
RGTGGLRLTGPDCATTVPGLFAAGDAATRELVTGSISGGGSHNGSWAIASGTFAGRGAAEFSRRRTAGDAVNADRVGLRP
GPRHAPTVDEVVRAAQQHVLPPMRSHLKSHERLTESAAVLEQVWRDIADGLAPVPARESYKPRQAVAMVAAARWITAASL
AREETRGLHRREDRPHTDHRLNHRILTGGLDTVWNDADPVAPQLISAEAVA

Specific function: Unknown

COG id: COG1053

COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003953
- InterPro:   IPR013027
- InterPro:   IPR003952
- InterPro:   IPR015939
- InterPro:   IPR004112
- InterPro:   IPR005884
- InterPro:   IPR014006 [H]

Pfam domain/function: PF00890 FAD_binding_2; PF02910 Succ_DH_flav_C [H]

EC number: =1.3.99.1 [H]

Molecular weight: Translated: 56895; Mature: 56764

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAGDPDVHHTDVLVIGGGPAATWAAIAAAEAGRRVTLVDKGYCGTSGATAAGGNNLWL
CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEE
IPPGPRREESVREREAAAGGLTDADWMHRVLSASWERIEQLARWGYPFPVGDDGRQLRSS
ECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
LQGPEYMRRMRRKAHRSGVHILDHHPATALTTDADGIVNGANGIARQDGGRSWRISAGAV
CCCHHHHHHHHHHHHHCCCEEEECCCCCEEECCCCCCEECCCCCCCCCCCCEEEEECCEE
VLATGGTAFLSGTFGTNVDTGDGLLMAAEVSAALSGMEFCTAYALAPEWGTHTKGRMLQW
EEEECCCEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
ASFYDEHGRPFPTERGLGGRKDAQWALAHGQRVFARLDRAPVHIRQTMRDAQPNYFLPLD
HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECC
KAGIDPFVTAYPVRMVYEGSVRGTGGLRLTGPDCATTVPGLFAAGDAATRELVTGSISGG
CCCCCCHHHHCCEEEEEECCCCCCCCEEEECCCHHHHCCCHHCCCCHHHHHHHEECCCCC
GSHNGSWAIASGTFAGRGAAEFSRRRTAGDAVNADRVGLRPGPRHAPTVDEVVRAAQQHV
CCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
LPPMRSHLKSHERLTESAAVLEQVWRDIADGLAPVPARESYKPRQAVAMVAAARWITAAS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LAREETRGLHRREDRPHTDHRLNHRILTGGLDTVWNDADPVAPQLISAEAVA
HHHHHHHHHHHHCCCCCCCHHCCCEEEECCHHHHCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
TAAGDPDVHHTDVLVIGGGPAATWAAIAAAEAGRRVTLVDKGYCGTSGATAAGGNNLWL
CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEE
IPPGPRREESVREREAAAGGLTDADWMHRVLSASWERIEQLARWGYPFPVGDDGRQLRSS
ECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
LQGPEYMRRMRRKAHRSGVHILDHHPATALTTDADGIVNGANGIARQDGGRSWRISAGAV
CCCHHHHHHHHHHHHHCCCEEEECCCCCEEECCCCCCEECCCCCCCCCCCCEEEEECCEE
VLATGGTAFLSGTFGTNVDTGDGLLMAAEVSAALSGMEFCTAYALAPEWGTHTKGRMLQW
EEEECCCEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
ASFYDEHGRPFPTERGLGGRKDAQWALAHGQRVFARLDRAPVHIRQTMRDAQPNYFLPLD
HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECC
KAGIDPFVTAYPVRMVYEGSVRGTGGLRLTGPDCATTVPGLFAAGDAATRELVTGSISGG
CCCCCCHHHHCCEEEEEECCCCCCCCEEEECCCHHHHCCCHHCCCCHHHHHHHEECCCCC
GSHNGSWAIASGTFAGRGAAEFSRRRTAGDAVNADRVGLRPGPRHAPTVDEVVRAAQQHV
CCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
LPPMRSHLKSHERLTESAAVLEQVWRDIADGLAPVPARESYKPRQAVAMVAAARWITAAS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
LAREETRGLHRREDRPHTDHRLNHRILTGGLDTVWNDADPVAPQLISAEAVA
HHHHHHHHHHHHCCCCCCCHHCCCEEEECCHHHHCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]