| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119868614
Identifier: 119868614
GI number: 119868614
Start: 2709815
End: 2711095
Strand: Reverse
Name: 119868614
Synonym: Mkms_2579
Alternate gene names: NA
Gene position: 2711095-2709815 (Counterclockwise)
Preceding gene: 119868615
Following gene: 119868613
Centisome position: 47.25
GC content: 61.9
Gene sequence:
>1281_bases ATGGATATGAACGACTTCGTCCTCGTGTCGGTCGACGATCACATGGTCGAGCCACCGGATATGTTCGACGGCCACATCCC GGCCAAGTACAAGGACGATGTACCGAAGTTGATCCAGCGCGCAGATGGCACCGACGCCTGGGTGTTCGAGGGTCAGGAGG CCACCAATGTGGGCCTCAACGCTGTCGCCGGACGCCCGCCCGACGAGTACGGCGCCGAGCCCACCAAACTCTCCGAGATC CGCGAAGGCTGCTACAACATCCACGAGCGAATTCGCGACATGAACGCCAACGGCGTCGCCGCGGCGTTGTGCTTCCCGTC CTACCCGCAGTTCTGCGGTCAATACTTCGCCCGTGCCCGGGACAAGGACCTGGTCCTGGCCGTGCTGCGCGCCTACAACG ACTGGAACATCGACGAGTGGTGCGGGACCTATCCGGGCCGGATGATCCCGCAGGCGCTGCCGCCCATCTGGGATCCGAAC CTGATGGCCGAGGAGGTACGGCGGGTGGCGAAGAAGGGCTGCCATGCGGTCTCGTTCTCCGAGAACCCCACCAAGATCGA TTATCCGTCGCTGCACGACCCGCACTGGGACCCGTTCTGGCAGGCCTGTAGCGAAACCAACACCGTGGTCAATCTGCACA TCGGCTCGTCATCGAGTGTGGTCATCACCTCGATCGATGCTCCGGTGGACACGATGATCACACTCCAGCCGATGAGCATC GTGCAGGCCGCCGCCGATCTCATCTGGTCGCCGATGCTGCGCAGATTCCCCGATCTCAAATTCGCGCTGTCCGAGGGCGG AATCGGTTGGGTGCCCTATTTCCTGGAGCGAATCGACCGGACCTACAAAATGCATCGTGCGTGGACACACCAGGACTTCG GCGACAAGATGCCTAGCGAGGTCTTCCTCGACCGGGTCGCGCTGTGCTTCATCGATGACGAGTTCGGCGTGGAGAACCGC CACAAACTCAACCTCGACATGGTCACCTGGGAGTGCGACTACCCGCATTCGGACTCGACGTGGCCCCTGTCCCCCGAGAC GCTGGCGATCTATTTCAACGGCGTTCCGGACGATGAGATCGACAAGATCACCCACTTGAATGCCATGCGGCTCTACTCGT TCGACATGTTCAGCCACATTCCGAAGGAGCAGCTCACGGTCGGGGCGCTGCGCGCTCAAGCCACCGACGTCGACCTCGGG TTCCGCTCATCCGAGCGGCTGAAGAAGACCGGCACCGACACCGTGACGGTTCTGGATCTGGCTTCGAAGCTGTCCACCTA G
Upstream 100 bases:
>100_bases AAGTCCTCGAGGTCTGCGATCGCCGTGGCATCAGCCCCATGCCGGACAACGCCGAGGTCGCTTTCCCGGAATCCGCCAAG AAGTAACTGAGGAGATCGAA
Downstream 100 bases:
>100_bases GCATCCGGCGTGGAGCGGTTGCTCGCGGCGGCTCGACAGGATGCGAGATTGCCTAACTTTTGTTCGGGCAACAGCAGTTT GGAGTCTTTCAACAGGGGCT
Product: amidohydrolase 2
Products: NA
Alternate protein names: Amidase; Amidohydrolase Family Protein; Metal-Dependent Hydrolase; Hydrolase; Barh Protein; Aminocarboxymuconate-Semialdehyde Decarboxylase; Amidohydrolase Family; TIM-Barrel Fold Metal-Dependent Hydrolase; Minocarboxymuconate-Semialdehyde Decarboxylase.; Metal-Dependent Amidohydrolase; Amidohydrolase 2 Protein
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MDMNDFVLVSVDDHMVEPPDMFDGHIPAKYKDDVPKLIQRADGTDAWVFEGQEATNVGLNAVAGRPPDEYGAEPTKLSEI REGCYNIHERIRDMNANGVAAALCFPSYPQFCGQYFARARDKDLVLAVLRAYNDWNIDEWCGTYPGRMIPQALPPIWDPN LMAEEVRRVAKKGCHAVSFSENPTKIDYPSLHDPHWDPFWQACSETNTVVNLHIGSSSSVVITSIDAPVDTMITLQPMSI VQAAADLIWSPMLRRFPDLKFALSEGGIGWVPYFLERIDRTYKMHRAWTHQDFGDKMPSEVFLDRVALCFIDDEFGVENR HKLNLDMVTWECDYPHSDSTWPLSPETLAIYFNGVPDDEIDKITHLNAMRLYSFDMFSHIPKEQLTVGALRAQATDVDLG FRSSERLKKTGTDTVTVLDLASKLST
Sequences:
>Translated_426_residues MDMNDFVLVSVDDHMVEPPDMFDGHIPAKYKDDVPKLIQRADGTDAWVFEGQEATNVGLNAVAGRPPDEYGAEPTKLSEI REGCYNIHERIRDMNANGVAAALCFPSYPQFCGQYFARARDKDLVLAVLRAYNDWNIDEWCGTYPGRMIPQALPPIWDPN LMAEEVRRVAKKGCHAVSFSENPTKIDYPSLHDPHWDPFWQACSETNTVVNLHIGSSSSVVITSIDAPVDTMITLQPMSI VQAAADLIWSPMLRRFPDLKFALSEGGIGWVPYFLERIDRTYKMHRAWTHQDFGDKMPSEVFLDRVALCFIDDEFGVENR HKLNLDMVTWECDYPHSDSTWPLSPETLAIYFNGVPDDEIDKITHLNAMRLYSFDMFSHIPKEQLTVGALRAQATDVDLG FRSSERLKKTGTDTVTVLDLASKLST >Mature_426_residues MDMNDFVLVSVDDHMVEPPDMFDGHIPAKYKDDVPKLIQRADGTDAWVFEGQEATNVGLNAVAGRPPDEYGAEPTKLSEI REGCYNIHERIRDMNANGVAAALCFPSYPQFCGQYFARARDKDLVLAVLRAYNDWNIDEWCGTYPGRMIPQALPPIWDPN LMAEEVRRVAKKGCHAVSFSENPTKIDYPSLHDPHWDPFWQACSETNTVVNLHIGSSSSVVITSIDAPVDTMITLQPMSI VQAAADLIWSPMLRRFPDLKFALSEGGIGWVPYFLERIDRTYKMHRAWTHQDFGDKMPSEVFLDRVALCFIDDEFGVENR HKLNLDMVTWECDYPHSDSTWPLSPETLAIYFNGVPDDEIDKITHLNAMRLYSFDMFSHIPKEQLTVGALRAQATDVDLG FRSSERLKKTGTDTVTVLDLASKLST
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48216; Mature: 48216
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMNDFVLVSVDDHMVEPPDMFDGHIPAKYKDDVPKLIQRADGTDAWVFEGQEATNVGLN CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCC AVAGRPPDEYGAEPTKLSEIREGCYNIHERIRDMNANGVAAALCFPSYPQFCGQYFARAR CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCC DKDLVLAVLRAYNDWNIDEWCGTYPGRMIPQALPPIWDPNLMAEEVRRVAKKGCHAVSFS CCHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCEEECC ENPTKIDYPSLHDPHWDPFWQACSETNTVVNLHIGSSSSVVITSIDAPVDTMITLQPMSI CCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCEEEEECHHHH VQAAADLIWSPMLRRFPDLKFALSEGGIGWVPYFLERIDRTYKMHRAWTHQDFGDKMPSE HHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHH VFLDRVALCFIDDEFGVENRHKLNLDMVTWECDYPHSDSTWPLSPETLAIYFNGVPDDEI HHHHHHHEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHHH DKITHLNAMRLYSFDMFSHIPKEQLTVGALRAQATDVDLGFRSSERLKKTGTDTVTVLDL HHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCEEHHHHH ASKLST HHHHCC >Mature Secondary Structure MDMNDFVLVSVDDHMVEPPDMFDGHIPAKYKDDVPKLIQRADGTDAWVFEGQEATNVGLN CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCC AVAGRPPDEYGAEPTKLSEIREGCYNIHERIRDMNANGVAAALCFPSYPQFCGQYFARAR CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCC DKDLVLAVLRAYNDWNIDEWCGTYPGRMIPQALPPIWDPNLMAEEVRRVAKKGCHAVSFS CCHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCEEECC ENPTKIDYPSLHDPHWDPFWQACSETNTVVNLHIGSSSSVVITSIDAPVDTMITLQPMSI CCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCEEEEECHHHH VQAAADLIWSPMLRRFPDLKFALSEGGIGWVPYFLERIDRTYKMHRAWTHQDFGDKMPSE HHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHH VFLDRVALCFIDDEFGVENRHKLNLDMVTWECDYPHSDSTWPLSPETLAIYFNGVPDDEI HHHHHHHEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHHH DKITHLNAMRLYSFDMFSHIPKEQLTVGALRAQATDVDLGFRSSERLKKTGTDTVTVLDL HHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCEEHHHHH ASKLST HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA