| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is ampH [C]
Identifier: 119868444
GI number: 119868444
Start: 2524273
End: 2525478
Strand: Reverse
Name: ampH [C]
Synonym: Mkms_2408
Alternate gene names: 119868444
Gene position: 2525478-2524273 (Counterclockwise)
Preceding gene: 119868457
Following gene: 119868443
Centisome position: 44.02
GC content: 68.49
Gene sequence:
>1206_bases GTGAATCTCGACGGCAACCAGGCGTCCATCCGTGAGGCTGTCGACGCCGGGCTGTTGTCCGGCGCCGTCACGCTCGTCTG GCAGGCGGGGCGGGTGGTGCAGGTGAACGAACTCGGCCACCGCGACATCGGCGCACGGCTGCCGATGCAACGCGACACGA TCTTCCGCATCGCGTCGATGACCAAACCGCTCACCGTGGCGGCGGCCATGAGCCTGGTCGACGAGGGCCGGTTCAGGCTC AGCGATCCGGTCACCGCGTGGCTGCCGGAGCTGGCCGACATGCAGGTGCTCGACACCCCGGGCGGTCCGCTGGACCGCAC CCACCCCGCGCGCAGGGCGATCACGGTCGACGATCTGATGACCCACCGCAGCGGGCTGGCCTACTTCTTCTCGGTCAGCG GGCCGCTGGCGCGCGCCTACGGCCGGATCTCGGCCAAGCAGAACCCGGATGCGTGGCTCGCGGAGATCGCCGCACTGCCG CTCGAACACCAGCCGGGTGAGCGCATGACCTACAGCAACTCCACCGATGTGCTGGGCGTCCTGCTCGAACGCATCGAGGG CAAATCGCTGCAGGAGGTGCTCACCGAACGTGTCCTCGGCCCGTTGGGGATGGCGGACACGGCGTTCTACGTGGCGCCGC GCAACCGCGGCCGGGTCGCGACGATGTACAAGCTCACCAGCGACGACACGCTCAGCCATGATGCGATGGGCCCGCCGGCC ACCACGCCGCCACCGTTCTGCATGGGCGGGGCGAATCTGTTCTCCACCGCCGACGACTATCTGCGGTTCGCCCGCATGCT GCTCGCCGGAGGCGAGGTGGACGGGGTGCGGGTGCTCTCCGAGCAGTCCGTTCAATCGATGCGCACCGACCGGCTGACCG CCGACCAGAAGCGGCACCCGTTCCTGGGGATGCCGTTCTGGCTCGGGCGGGGTTTCGGGTTGAACCTGTCCGTGGTCACC GACCCCGCCAAATCGCGTCAGCTGTTCGGGCCGGGCGGCCTGGGCACGTTCAGCTGGCCGGGTGCCTACGGCACGTGGTG GCAGGCCGATCCGACCAACGATCTGATCCTCATCTACCTGATCCAGAACCTGCCCAACTTCGGCGCCGACGCCGCCGCGG CGGTCGCGGGCAACACCTCGTTGATGAAACTGCAGTCGGTGCAACCGAAGTTCGTGCGACGCACGTACTCGGCGCTCGGC ATATGA
Upstream 100 bases:
>100_bases CTCCTTCTCCGCCTCGCCGGACGGATCGTTAAAGGATGTCAAACTGCGGGAAGCCTACCACCGCAGCGGCATCCTCCCGG TCCTGGCTAGCCTGGGCAGC
Downstream 100 bases:
>100_bases AGGCACGGCGCCGCAGCCACGGTTAGCCTGTCGCCATGTCTGCGCCGACCGTCCTCGTCAGCGGCGCCGGGATAGCCGGC CCCGCACTCGCATTCTGGTT
Product: beta-lactamase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MNLDGNQASIREAVDAGLLSGAVTLVWQAGRVVQVNELGHRDIGARLPMQRDTIFRIASMTKPLTVAAAMSLVDEGRFRL SDPVTAWLPELADMQVLDTPGGPLDRTHPARRAITVDDLMTHRSGLAYFFSVSGPLARAYGRISAKQNPDAWLAEIAALP LEHQPGERMTYSNSTDVLGVLLERIEGKSLQEVLTERVLGPLGMADTAFYVAPRNRGRVATMYKLTSDDTLSHDAMGPPA TTPPPFCMGGANLFSTADDYLRFARMLLAGGEVDGVRVLSEQSVQSMRTDRLTADQKRHPFLGMPFWLGRGFGLNLSVVT DPAKSRQLFGPGGLGTFSWPGAYGTWWQADPTNDLILIYLIQNLPNFGADAAAAVAGNTSLMKLQSVQPKFVRRTYSALG I
Sequences:
>Translated_401_residues MNLDGNQASIREAVDAGLLSGAVTLVWQAGRVVQVNELGHRDIGARLPMQRDTIFRIASMTKPLTVAAAMSLVDEGRFRL SDPVTAWLPELADMQVLDTPGGPLDRTHPARRAITVDDLMTHRSGLAYFFSVSGPLARAYGRISAKQNPDAWLAEIAALP LEHQPGERMTYSNSTDVLGVLLERIEGKSLQEVLTERVLGPLGMADTAFYVAPRNRGRVATMYKLTSDDTLSHDAMGPPA TTPPPFCMGGANLFSTADDYLRFARMLLAGGEVDGVRVLSEQSVQSMRTDRLTADQKRHPFLGMPFWLGRGFGLNLSVVT DPAKSRQLFGPGGLGTFSWPGAYGTWWQADPTNDLILIYLIQNLPNFGADAAAAVAGNTSLMKLQSVQPKFVRRTYSALG I >Mature_401_residues MNLDGNQASIREAVDAGLLSGAVTLVWQAGRVVQVNELGHRDIGARLPMQRDTIFRIASMTKPLTVAAAMSLVDEGRFRL SDPVTAWLPELADMQVLDTPGGPLDRTHPARRAITVDDLMTHRSGLAYFFSVSGPLARAYGRISAKQNPDAWLAEIAALP LEHQPGERMTYSNSTDVLGVLLERIEGKSLQEVLTERVLGPLGMADTAFYVAPRNRGRVATMYKLTSDDTLSHDAMGPPA TTPPPFCMGGANLFSTADDYLRFARMLLAGGEVDGVRVLSEQSVQSMRTDRLTADQKRHPFLGMPFWLGRGFGLNLSVVT DPAKSRQLFGPGGLGTFSWPGAYGTWWQADPTNDLILIYLIQNLPNFGADAAAAVAGNTSLMKLQSVQPKFVRRTYSALG I
Specific function: Binds Penicillin And Contributes To The Normal Morphology Of Escherichia Coli. [C]
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786574, Length=223, Percent_Identity=25.5605381165919, Blast_Score=62, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 43558; Mature: 43558
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLDGNQASIREAVDAGLLSGAVTLVWQAGRVVQVNELGHRDIGARLPMQRDTIFRIASM CCCCCCHHHHHHHHHHHHHHHHHHEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHC TKPLTVAAAMSLVDEGRFRLSDPVTAWLPELADMQVLDTPGGPLDRTHPARRAITVDDLM CCCHHHHHHHHHHHCCCEEECCCHHHHHHHHCCCEEEECCCCCCCCCCCHHHEEEHHHHH THRSGLAYFFSVSGPLARAYGRISAKQNPDAWLAEIAALPLEHQPGERMTYSNSTDVLGV HHCCCCEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCHHHHHH LLERIEGKSLQEVLTERVLGPLGMADTAFYVAPRNRGRVATMYKLTSDDTLSHDAMGPPA HHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCC TTPPPFCMGGANLFSTADDYLRFARMLLAGGEVDGVRVLSEQSVQSMRTDRLTADQKRHP CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC FLGMPFWLGRGFGLNLSVVTDPAKSRQLFGPGGLGTFSWPGAYGTWWQADPTNDLILIYL CCCCHHHHCCCCCCEEEEEECCHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE IQNLPNFGADAAAAVAGNTSLMKLQSVQPKFVRRTYSALGI ECCCCCCCCCHHHHHCCCCCEEEECCCCHHHHHHHHHHHCC >Mature Secondary Structure MNLDGNQASIREAVDAGLLSGAVTLVWQAGRVVQVNELGHRDIGARLPMQRDTIFRIASM CCCCCCHHHHHHHHHHHHHHHHHHEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHC TKPLTVAAAMSLVDEGRFRLSDPVTAWLPELADMQVLDTPGGPLDRTHPARRAITVDDLM CCCHHHHHHHHHHHCCCEEECCCHHHHHHHHCCCEEEECCCCCCCCCCCHHHEEEHHHHH THRSGLAYFFSVSGPLARAYGRISAKQNPDAWLAEIAALPLEHQPGERMTYSNSTDVLGV HHCCCCEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCHHHHHH LLERIEGKSLQEVLTERVLGPLGMADTAFYVAPRNRGRVATMYKLTSDDTLSHDAMGPPA HHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCC TTPPPFCMGGANLFSTADDYLRFARMLLAGGEVDGVRVLSEQSVQSMRTDRLTADQKRHP CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC FLGMPFWLGRGFGLNLSVVTDPAKSRQLFGPGGLGTFSWPGAYGTWWQADPTNDLILIYL CCCCHHHHCCCCCCEEEEEECCHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE IQNLPNFGADAAAAVAGNTSLMKLQSVQPKFVRRTYSALGI ECCCCCCCCCHHHHHCCCCCEEEECCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]