| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119868383
Identifier: 119868383
GI number: 119868383
Start: 2460180
End: 2460806
Strand: Reverse
Name: 119868383
Synonym: Mkms_2347
Alternate gene names: NA
Gene position: 2460806-2460180 (Counterclockwise)
Preceding gene: 119868385
Following gene: 119868382
Centisome position: 42.89
GC content: 68.74
Gene sequence:
>627_bases ATGGCGAGGACCAGCGGCAGGTCGGACACCGTGGGCGAAGATGTCGCGTCGCGTCCCGAACGGTTCATGCGCTCGGCGCT GGCCATCCTCGGCGAGACCGGCCGCACCGACTTCACGGTGCTCGAGGTCGTGGAGCGTTCGAAGACCTCTCTGCGGTCCT TCTACCAGCGCTTCTCCACCAAGGACGAGCTGCTGCTGGCACTCATCGAGCGCATCATGGCCGAATCCGCCCGGCACTGG CGTGCCGACACCGATGACCTGCCCGCCCCGGCGGCACTGCGCACGCTGATCGACCGCATCTGCGTCCCACCCGGATCGGA CACCCAGGACCGGGTCAACAAGGGTCTGACCTCGTACAACGACCGCCTCGCCGAATCGATGCCGCGGGAGTACGCCATGG TGCTGACCCCGCTGCACACCCTGATCGCCGACATCATCCGGCGCGGCATCGCCGACGGCGACTTCCGCGACGACCTCGAC GTCGCCGCGACGTCGGCCCTGATCATGCAGTCGGTGCTGGGTTCGATGCGGCTGCGGGTGCTCGGTGCCGAACTGTCGGG GGCCCCGGTCGACGCCGGGCACATCTACGACTTCTGCGCGCGGGCGCTGCTCGTCGCACCGCACTGA
Upstream 100 bases:
>100_bases TCCGGTTGTCTTCGGTGCACCCTATCCAGAAGCTACATAGCCTTCTGCGAAAGCGGTAACGTCATTCTCACCATTTGCAG CCCACGCGGAAGGTGCACCC
Downstream 100 bases:
>100_bases TCGCCCCTGTTTACCCCGTCGACCAAGTGGTAATGTCATTACCACTTGGCGTGAATACGACTTCCAGGAGGCGGATATGC CCTCACGTGAACTGTCCTAT
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; Transcriptional Regulatory Protein
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MARTSGRSDTVGEDVASRPERFMRSALAILGETGRTDFTVLEVVERSKTSLRSFYQRFSTKDELLLALIERIMAESARHW RADTDDLPAPAALRTLIDRICVPPGSDTQDRVNKGLTSYNDRLAESMPREYAMVLTPLHTLIADIIRRGIADGDFRDDLD VAATSALIMQSVLGSMRLRVLGAELSGAPVDAGHIYDFCARALLVAPH
Sequences:
>Translated_208_residues MARTSGRSDTVGEDVASRPERFMRSALAILGETGRTDFTVLEVVERSKTSLRSFYQRFSTKDELLLALIERIMAESARHW RADTDDLPAPAALRTLIDRICVPPGSDTQDRVNKGLTSYNDRLAESMPREYAMVLTPLHTLIADIIRRGIADGDFRDDLD VAATSALIMQSVLGSMRLRVLGAELSGAPVDAGHIYDFCARALLVAPH >Mature_207_residues ARTSGRSDTVGEDVASRPERFMRSALAILGETGRTDFTVLEVVERSKTSLRSFYQRFSTKDELLLALIERIMAESARHWR ADTDDLPAPAALRTLIDRICVPPGSDTQDRVNKGLTSYNDRLAESMPREYAMVLTPLHTLIADIIRRGIADGDFRDDLDV AATSALIMQSVLGSMRLRVLGAELSGAPVDAGHIYDFCARALLVAPH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22932; Mature: 22801
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTSGRSDTVGEDVASRPERFMRSALAILGETGRTDFTVLEVVERSKTSLRSFYQRFST CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC KDELLLALIERIMAESARHWRADTDDLPAPAALRTLIDRICVPPGSDTQDRVNKGLTSYN HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHH DRLAESMPREYAMVLTPLHTLIADIIRRGIADGDFRDDLDVAATSALIMQSVLGSMRLRV HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LGAELSGAPVDAGHIYDFCARALLVAPH HHCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure ARTSGRSDTVGEDVASRPERFMRSALAILGETGRTDFTVLEVVERSKTSLRSFYQRFST CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC KDELLLALIERIMAESARHWRADTDDLPAPAALRTLIDRICVPPGSDTQDRVNKGLTSYN HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHH DRLAESMPREYAMVLTPLHTLIADIIRRGIADGDFRDDLDVAATSALIMQSVLGSMRLRV HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LGAELSGAPVDAGHIYDFCARALLVAPH HHCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA