| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is mhpC [C]
Identifier: 119868254
GI number: 119868254
Start: 2333878
End: 2334900
Strand: Reverse
Name: mhpC [C]
Synonym: Mkms_2218
Alternate gene names: 119868254
Gene position: 2334900-2333878 (Counterclockwise)
Preceding gene: 119868255
Following gene: 119868253
Centisome position: 40.7
GC content: 67.55
Gene sequence:
>1023_bases TTGACTGACCGCACACCCAACCTCCGCCCGGTCCGCGACGTGACGCCCACGCTGCATTACCGCACCATCCACGGATACCG CCGAGCCTTCCGGATCGCCGGCGAGGGTCCCGCGATTCTGCTGATCCACGGCATCGGCGACAACTCCACGACGTGGAACA CGGTGCAGACCAAACTCGCGCAGCGCTTCACCGTCATCGCACCCGACCTGCTCGGACACGGCAAGTCGGACAAACCGCGC GCGGACTATTCGGTGGCCGCCTACGCCAACGGCATGCGGGATCTGCTCAGCGTCCTCGACATCGACCGGGTGACGGTGGT CGGCCACTCGCTGGGCGGCGGCGTGGCCATGCAGTTCGCCTACCAGTTCCCGCAGTTCGTCGACCGCCTCATCCTGGTCG GCGCCGGTGGAGTCACCAAGGACGTCAACATCGCCCTGCGGGTGGCCTCCCTGCCGATGGGAAGTGAGGCGCTCGCACTG CTGCGCCTGCCGCTGGTGTTGCCGACGCTGCAGGTCGCCGGACGGCTCGCGGGCACGGTGCTCGGCACCACCAAGATGGG CCGGGATCTCGCCGAGATGATGCGGATACTCGCCGATCTGCCCGAACCGACGGCGTCATCGGCGTTCGCCAGGACATTGC GCGCAGTGGTCGACTGGCGCGGTCAGGTGGTCACCATGCTCGACCGGTGTTATCTCACCGAATCCGTTCCGGTGCAGCTG GTTTGGGGCACCCACGATTCGGTGATCCCGGTCAGCCATGCCCGGCTGGCGCACGCGGCGATGCCCGGATCCCGGCTGGA GGTCTTCGAGGGGGCCGGACACTTCCCCTTCCACGACGATCCGGACCGGTTCGTCGAAATCGTGGAGCGCTTCATCGATT CGACCGAGCCGGCCAACCACGACCAGGACATCCTGCGCCAGTTGTTGCGGACCGGCCTGAGCGAATCGGCGATCAGCGGG TCCGTCGACACCCGCGTCGCGGTCCTCGACGCGATGGGCAGCGACGAACGCAGCGCGACCTGA
Upstream 100 bases:
>100_bases AGAGGACCGGTACCGGGACGGGTTCTCCGACGGCGAGGACCGCAGCTGAACAGACCGCACGCCGCCGGAGTGTTCGCGGC CCGATGACGAGGTTGGCGAA
Downstream 100 bases:
>100_bases CCGCCCCGTCACCGCCGAACACGTAGCATCGGCGCATGGCCATCGATGTCCAGGTCTTGCGTGTCTTCACCGATCCTGAC GGCAACCACGGCAACCCGCT
Product: alpha/beta hydrolase fold protein
Products: 2-oxopent-4-enoate; succinate [C]
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MTDRTPNLRPVRDVTPTLHYRTIHGYRRAFRIAGEGPAILLIHGIGDNSTTWNTVQTKLAQRFTVIAPDLLGHGKSDKPR ADYSVAAYANGMRDLLSVLDIDRVTVVGHSLGGGVAMQFAYQFPQFVDRLILVGAGGVTKDVNIALRVASLPMGSEALAL LRLPLVLPTLQVAGRLAGTVLGTTKMGRDLAEMMRILADLPEPTASSAFARTLRAVVDWRGQVVTMLDRCYLTESVPVQL VWGTHDSVIPVSHARLAHAAMPGSRLEVFEGAGHFPFHDDPDRFVEIVERFIDSTEPANHDQDILRQLLRTGLSESAISG SVDTRVAVLDAMGSDERSAT
Sequences:
>Translated_340_residues MTDRTPNLRPVRDVTPTLHYRTIHGYRRAFRIAGEGPAILLIHGIGDNSTTWNTVQTKLAQRFTVIAPDLLGHGKSDKPR ADYSVAAYANGMRDLLSVLDIDRVTVVGHSLGGGVAMQFAYQFPQFVDRLILVGAGGVTKDVNIALRVASLPMGSEALAL LRLPLVLPTLQVAGRLAGTVLGTTKMGRDLAEMMRILADLPEPTASSAFARTLRAVVDWRGQVVTMLDRCYLTESVPVQL VWGTHDSVIPVSHARLAHAAMPGSRLEVFEGAGHFPFHDDPDRFVEIVERFIDSTEPANHDQDILRQLLRTGLSESAISG SVDTRVAVLDAMGSDERSAT >Mature_339_residues TDRTPNLRPVRDVTPTLHYRTIHGYRRAFRIAGEGPAILLIHGIGDNSTTWNTVQTKLAQRFTVIAPDLLGHGKSDKPRA DYSVAAYANGMRDLLSVLDIDRVTVVGHSLGGGVAMQFAYQFPQFVDRLILVGAGGVTKDVNIALRVASLPMGSEALALL RLPLVLPTLQVAGRLAGTVLGTTKMGRDLAEMMRILADLPEPTASSAFARTLRAVVDWRGQVVTMLDRCYLTESVPVQLV WGTHDSVIPVSHARLAHAAMPGSRLEVFEGAGHFPFHDDPDRFVEIVERFIDSTEPANHDQDILRQLLRTGLSESAISGS VDTRVAVLDAMGSDERSAT
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dmpD/todF/xylF esterase family [H]
Homologues:
Organism=Homo sapiens, GI218777840, Length=272, Percent_Identity=23.5294117647059, Blast_Score=76, Evalue=6e-14, Organism=Homo sapiens, GI13376164, Length=272, Percent_Identity=23.5294117647059, Blast_Score=76, Evalue=6e-14, Organism=Homo sapiens, GI145611434, Length=259, Percent_Identity=25.0965250965251, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI18777795, Length=101, Percent_Identity=34.6534653465347, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI23200008, Length=263, Percent_Identity=27.3764258555133, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI23200012, Length=263, Percent_Identity=27.3764258555133, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI31542303, Length=250, Percent_Identity=24.4, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI50658087, Length=281, Percent_Identity=25.2669039145907, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17554012, Length=276, Percent_Identity=22.8260869565217, Blast_Score=81, Evalue=9e-16, Organism=Caenorhabditis elegans, GI25146278, Length=262, Percent_Identity=27.4809160305344, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI32566936, Length=262, Percent_Identity=26.7175572519084, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17558492, Length=262, Percent_Identity=26.7175572519084, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24586387, Length=293, Percent_Identity=24.2320819112628, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24586391, Length=293, Percent_Identity=24.2320819112628, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24586389, Length=293, Percent_Identity=24.2320819112628, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24586385, Length=276, Percent_Identity=24.2753623188406, Blast_Score=69, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: 3.7.1.- [C]
Molecular weight: Translated: 36962; Mature: 36831
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRTPNLRPVRDVTPTLHYRTIHGYRRAFRIAGEGPAILLIHGIGDNSTTWNTVQTKLA CCCCCCCCCCHHHCCCCHHHHHHHHHHHHEEECCCCCEEEEEEECCCCCCCHHHHHHHHH QRFTVIAPDLLGHGKSDKPRADYSVAAYANGMRDLLSVLDIDRVTVVGHSLGGGVAMQFA HHHHEECHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH YQFPQFVDRLILVGAGGVTKDVNIALRVASLPMGSEALALLRLPLVLPTLQVAGRLAGTV HHHHHHHHHHHEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LGTTKMGRDLAEMMRILADLPEPTASSAFARTLRAVVDWRGQVVTMLDRCYLTESVPVQL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEE VWGTHDSVIPVSHARLAHAAMPGSRLEVFEGAGHFPFHDDPDRFVEIVERFIDSTEPANH EECCCCCCCCCHHHHHHHHCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC DQDILRQLLRTGLSESAISGSVDTRVAVLDAMGSDERSAT HHHHHHHHHHCCCCHHHCCCCCHHHEEEEECCCCCCCCCC >Mature Secondary Structure TDRTPNLRPVRDVTPTLHYRTIHGYRRAFRIAGEGPAILLIHGIGDNSTTWNTVQTKLA CCCCCCCCCHHHCCCCHHHHHHHHHHHHEEECCCCCEEEEEEECCCCCCCHHHHHHHHH QRFTVIAPDLLGHGKSDKPRADYSVAAYANGMRDLLSVLDIDRVTVVGHSLGGGVAMQFA HHHHEECHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH YQFPQFVDRLILVGAGGVTKDVNIALRVASLPMGSEALALLRLPLVLPTLQVAGRLAGTV HHHHHHHHHHHEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LGTTKMGRDLAEMMRILADLPEPTASSAFARTLRAVVDWRGQVVTMLDRCYLTESVPVQL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEE VWGTHDSVIPVSHARLAHAAMPGSRLEVFEGAGHFPFHDDPDRFVEIVERFIDSTEPANH EECCCCCCCCCHHHHHHHHCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC DQDILRQLLRTGLSESAISGSVDTRVAVLDAMGSDERSAT HHHHHHHHHHCCCCHHHCCCCCHHHEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]
Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]