| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119868093
Identifier: 119868093
GI number: 119868093
Start: 2180600
End: 2181154
Strand: Reverse
Name: 119868093
Synonym: Mkms_2056
Alternate gene names: NA
Gene position: 2181154-2180600 (Counterclockwise)
Preceding gene: 119868094
Following gene: 119868091
Centisome position: 38.02
GC content: 66.85
Gene sequence:
>555_bases GTGAACGAACCACTGACCGCCCGGCGCGACCCCGCCGACTTCGACGATTCGTCGACGCAGCACCGCATCCTGGCGGCCAC CGCCGAGGTGCTCGGACGGAGCGGCCAGACGAAACTGAGCCTGTCGGAGGTCGCACTCCAGGCCGGCGTCTCCCGGCCGA CGCTGTACCGCTGGTTCGCCTCCAAGCAGGAATTGCTCGACGCCTTCGGCCGCTACGAGCGGGCGATGTTCGACCGGGGC ATCAGCAAGGCGACGCAGGGACTGCGGGGTAACGAAAAGCTCGACGCCGCACTGCGTTTCATCGTGTCCTACCAGCAGTC CTACTCGGGTGTCCGCCTGGTCGACATCGAACCCGAAGTGGTGATCGCACAGCTGTCCCGCATCATCCCGTTGATGCGGG CGCGGCTCGAGAAGCTGCTCTCGGGGCCCAACGCCTCGGTCAAGGCCGCCACGGCTATCCGCGTCGCGGTGTGTCACTAC ATCGTGCGCAGCGACGACGGCGACCAGTTCCTCGCCCAGTTGCGCCACGCGGTGGGGCTCAAGAACCAGGATTAG
Upstream 100 bases:
>100_bases AAGAAGTCGCTGTGATTCCCGCGTCCGGCCGTGCAGATCACCCGGCACGGCGTTACAGGCTCTACCATCTGTGAAACACC CCGTCACTCGAGGCTTGGAC
Downstream 100 bases:
>100_bases CCGGCTGCTGCAGTGCCGACTGCTTCGATGCGCACCGGGACCCCGTTCAGTACCGACATCCCGGCCAGCGCCTCGAGATC CGCCGACCGGTTCGAGGTCA
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family Protein; Regulatory Protein
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MNEPLTARRDPADFDDSSTQHRILAATAEVLGRSGQTKLSLSEVALQAGVSRPTLYRWFASKQELLDAFGRYERAMFDRG ISKATQGLRGNEKLDAALRFIVSYQQSYSGVRLVDIEPEVVIAQLSRIIPLMRARLEKLLSGPNASVKAATAIRVAVCHY IVRSDDGDQFLAQLRHAVGLKNQD
Sequences:
>Translated_184_residues MNEPLTARRDPADFDDSSTQHRILAATAEVLGRSGQTKLSLSEVALQAGVSRPTLYRWFASKQELLDAFGRYERAMFDRG ISKATQGLRGNEKLDAALRFIVSYQQSYSGVRLVDIEPEVVIAQLSRIIPLMRARLEKLLSGPNASVKAATAIRVAVCHY IVRSDDGDQFLAQLRHAVGLKNQD >Mature_184_residues MNEPLTARRDPADFDDSSTQHRILAATAEVLGRSGQTKLSLSEVALQAGVSRPTLYRWFASKQELLDAFGRYERAMFDRG ISKATQGLRGNEKLDAALRFIVSYQQSYSGVRLVDIEPEVVIAQLSRIIPLMRARLEKLLSGPNASVKAATAIRVAVCHY IVRSDDGDQFLAQLRHAVGLKNQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20401; Mature: 20401
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEPLTARRDPADFDDSSTQHRILAATAEVLGRSGQTKLSLSEVALQAGVSRPTLYRWFA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHH SKQELLDAFGRYERAMFDRGISKATQGLRGNEKLDAALRFIVSYQQSYSGVRLVDIEPEV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCHHH VIAQLSRIIPLMRARLEKLLSGPNASVKAATAIRVAVCHYIVRSDDGDQFLAQLRHAVGL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC KNQD CCCC >Mature Secondary Structure MNEPLTARRDPADFDDSSTQHRILAATAEVLGRSGQTKLSLSEVALQAGVSRPTLYRWFA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHH SKQELLDAFGRYERAMFDRGISKATQGLRGNEKLDAALRFIVSYQQSYSGVRLVDIEPEV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCHHH VIAQLSRIIPLMRARLEKLLSGPNASVKAATAIRVAVCHYIVRSDDGDQFLAQLRHAVGL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC KNQD CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA